|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2033508..2034883- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25000-T1 ID=CAN33_25000-T1|Name=CAN33_25000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1376bp|location=Sequence derived from alignment at NKJJ01000002.1:2033508..2034883- (Aspergillus niger FDAARGOS_311)
ATGACGTCCGAGTCATCATCCAGCAGCTCTTCAGAACACACGGGGAATCC
TGTATCCTGTGAAGAGAATGACAATGAAATGGACGAACGAAAATTTCTTA
AGAATTGGACATATTGCATCCGTTCGGATTTTACTTCATTGTCTGGTGTG
CCGGCCACTTGGGAGAACGGCCATCCAAAACACTGGGGTCAGGAAGAAGC
GAAGATCTTTCTCGACGGGGAGGCGACGACCCCTGCCATAAGTCCAGATA
ATCAGATAGTTGCAATAGGAATTGCAAATCAAATTCACTTATTCCGTGTG
AACACTAAGGAGCGAGTCGATGTGTTACACGGACATCCTGGGGAGGTAGT
TACTGTCGCCTTTGCACCCAGCCTAGATAAGGACTCGATCGACAAGCCGG
ATGCCCCACGTTATTTGTTAGCATCACAAAGTGAAGAAGAAGGTGGAGGA
AACGGGTACATCATAGTGTGGGAGCTTGATCAGTATGGCATGAAAATGCC
TTCGTCGAAAGAGGAACAAGAACAACAAATTGCTGCTGCAGACCATCAGA
ACACCGACTTCATGCACTGTTTCCCCGGCGAAATGGGCTCATTCGGGGGG
CAGTCTTCAGTCCTGACGGTAAAACGATGATATACATCGTCCAAAACGTT
ACGATCGACTATTATACTGGGAATTGCCGTTACTCCCCCTGTGTCATTCT
CTGGGATGTGGATAGCCGATTAATTCGACATCGGCTCCAAGGCCACACAG
ACATTGTAATCTGGATCGGCATCAGCCCAGATAGCTCCCTTGCTGCTTCC
ATATCGTGGGATGGCACCGCGCGAATCTGGGACATTCTCTCCGGCAAATC
CCTTCATATTATTGGACCCTTGGGCGGCCAACTTTGGTGTGGTGCCTTCT
CCCCAGACTCTAAATATTTGGCTGTCAGCCAGGGAGGTCACGACCTTATT
CATATTTACAATATCCCCACGGCACAGCCAGTCTCATGTATCGAATTACC
TACATGGTCGCGCTCCATGGCCTGGAGTCCGGATGGGAGATTTTTGGCCG
GTGGGCTTCAGATCGGTGCACTTTGCCTGTGGGACCCTTACACAGGAATG
GAGAAACAGAGATGGTCTCTGCACTTCGATGATTTTATGATGCAGGAATA
CGCAACTATTGGAGGCGTACAGTTTATCGGCGACAAGTTGATCTTCCGGA
TACTTGAGGGAACGGTTGAGGTATATGATTTGGCTACGAATCTCAAGCAG
CAGTTTACACGGGGACCGGACGCTAAGATCAGCAGGTGTCCACGTGGGGA
AATGGTCTGCTCGAGGGATTCCAAGCTGCTTATTATCCCAGATGCTGATG
GAACCTTACGTTTCTGGGGACTATAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2033508..2034883- >CAN33_25000-T1 ID=CAN33_25000-T1|Name=CAN33_25000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2682bp|location=Sequence derived from alignment at NKJJ01000002.1:2033508..2034883- (Aspergillus niger FDAARGOS_311)
TCTTCAGTCCTGACGGTAAAACGATGATATACATCGTCCAAAACGTTACG
ATCGACTATTATACTGGGAATTGCCGTTACTCCCCCTGTGTCATTCTCTG
GGATGTGGATAGCCGATTAATTCGACATCGGCTCCAAGGCCACACAGACA
TTGTAATCTGGATCGGCATCAGCCCAGATAGCTCCCTTGCTGCTTCCATA
TCGTGGGATGGCACCGCGCGAATCTGGGACATTCTCTCCGGCAAATCCCT
TCATATTATTGGACCCTTGGGCGGCCAACTTTGGTGTGGTGCCTTCTCCC
CAGACTCTAAATATTTGGCTGTCAGCCAGGGAGGTCACGACCTTATTCAT
ATTTACAATATCCCCACGGCACAGCCAGTCTCATGTATCGAATTACCTAC
ATGGTCGCGCTCCATGGCCTGGAGTCCGGATGGGAGATTTTTGGCCGGTG
GGCTTCAGATCGGTGCACTTTGCCTGTGGGACCCTTACACAGGAATGGAG
AAACAGAGATGGTCTCTGCACTTCGATGATTTTATGATGCAGGAATACGC
AACTATTGGAGGCGTACAGTTTATCGGCGACAAGTTGATCTTCCGGATAC
TTGAGGGAACGGTTGAGGTATATGATTTGGCTACGAATCTCAAGCAGCAG
TTTACACGGGGACCGGACGCTAAGATCAGCAGGTGTCCACGTGGGGAAAT
GGTCTGCTCGAGGGATTCCAAGCTGCTTATTATCCCAGATGCTGATGGAA
CCTTACGTTTCTGGGGACTATAAATGACGTCCGAGTCATCATCCAGCAGC
TCTTCAGAACACACGGGGAATCCTGTATCCTGTGAAGAGAATGACAATGA
AATGGACGAACGAAAATTTCTTAAGAATTGGACATATTGCATCCGTTCGG
ATTTTACTTCATTGTCTGGTGTGCCGGCCACTTGGGAGAACGGCCATCCA
AAACACTGGGGTCAGGAAGAAGCGAAGATCTTTCTCGACGGGGAGGCGAC
GACCCCTGCCATAAGTCCAGATAATCAGATAGTTGCAATAGGAATTGCAA
ATCAAATTCACTTATTCCGTGTGAACACTAAGGAGCGAGTCGATGTGTTA
CACGGACATCCTGGGGAGGTAGTTACTGTCGCCTTTGCACCCAGCCTAGA
TAAGGACTCGATCGACAAGCCGGATGCCCCACGTTATTTGTTAGCATCAC
AAAGTGAAGAAGAAGGTGGAGGAAACGGGTACATCATAGTGTGGGAGCTT
GATCAGTATGGCATGAAAATGCCTTCGTCGAAAGAGGAACAAGAACAACA
AATTGCTGCTGCAGACCATCAGAACACCGACTTCATGCACTTCTTCAGTC
CTGACGGTAAAACGATGATATACATCGTCCAAAACGTTACGATCGACTAT
TATACTGGGAATTGCCGTTACTCCCCCTGTGTCATTCTCTGGGATGTGGA
TAGCCGATTAATTCGACATCGGCTCCAAGGCCACACAGACATTGTAATCT
GGATCGGCATCAGCCCAGATAGCTCCCTTGCTGCTTCCATATCGTGGGAT
GGCACCGCGCGAATCTGGGACATTCTCTCCGGCAAATCCCTTCATATTAT
TGGACCCTTGGGCGGCCAACTTTGGTGTGGTGCCTTCTCCCCAGACTCTA
AATATTTGGCTGTCAGCCAGGGAGGTCACGACCTTATTCATATTTACAAT
ATCCCCACGGCACAGCCAGTCTCATGTATCGAATTACCTACATGGTCGCG
CTCCATGGCCTGGAGTCCGGATGGGAGATTTTTGGCCGGTGGGCTTCAGA
TCGGTGCACTTTGCCTGTGGGACCCTTACACAGGAATGGAGAAACAGAGA
TGGTCTCTGCACTTCGATGATTTTATGATGCAGGAATACGCAACTATTGG
AGGCGTACAGTTTATCGGCGACAAGTTGATCTTCCGGATACTTGAGGGAA
CGGTTGAGGTATATGATTTGGCTACGAATCTCAAGCAGCAGTTTACACGG
GGACCGGACGCTAAGATCAGCAGGTGTCCACGTGGGGAAATGGTCTGCTC
GAGGGATTCCAAGCTGCTTATTATCCCAGATGCTGATGGAACCTTACGTT
TCTGGGGACTATAAATGACGTCCGAGTCATCATCCAGCAGCTCTTCAGAA
CACACGGGGAATCCTGTATCCTGTGAAGAGAATGACAATGAAATGGACGA
ACGAAAATTTCTTAAGAATTGGACATATTGCATCCGTTCGGATTTTACTT
CATTGTCTGGTGTGCCGGCCACTTGGGAGAACGGCCATCCAAAACACTGG
GGTCAGGAAGAAGCGAAGATCTTTCTCGACGGGGAGGCGACGACCCCTGC
CATAAGTCCAGATAATCAGATAGTTGCAATAGGAATTGCAAATCAAATTC
ACTTATTCCGTGTGAACACTAAGGAGCGAGTCGATGTGTTACACGGACAT
CCTGGGGAGGTAGTTACTGTCGCCTTTGCACCCAGCCTAGATAAGGACTC
GATCGACAAGCCGGATGCCCCACGTTATTTGTTAGCATCACAAAGTGAAG
AAGAAGGTGGAGGAAACGGGTACATCATAGTGTGGGAGCTTGATCAGTAT
GGCATGAAAATGCCTTCGTCGAAAGAGGAACAAGAACAACAAATTGCTGC
TGCAGACCATCAGAACACCGACTTCATGCACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR011659 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | WD domain G-beta repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2033508..2034883 - |
|
