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CAN33_25035-T1, CAN33_25035-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25035-T1
Unique NameCAN33_25035-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2050584..2052458-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25035-T1 ID=CAN33_25035-T1|Name=CAN33_25035-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1875bp|location=Sequence derived from alignment at NKJJ01000002.1:2050584..2052458- (Aspergillus niger FDAARGOS_311)
ATGCATTCATCATGGACACCGCCTCCTATCGGCTCCAGGCCTCTTGCACT
CCTCGGTGCGGGTGTTTTGGGCCGTCGAATCGCCTGTGTCTTTGCCGCAG
CAGGATACAACGTCAATCTATACGACCCGTCTCTCAGCGCACAACAGGCC
GCGCTGGACTACGTCACGCAAAATCTGAAAACGTATTCGAAGTTTTCCAA
AGGGAACCGCCGCTTCGGCCACTGTCGCGCGTTCTCCGACCTTGAAAGCA
CTGTGAGCGACGCCTGGTTGGTCATTGAAGCAGTTCCCGAACATCTACAA
ATGAAGATTGATGTCATGGGCGAGCTCGACAAGTTAGCGCCGGTGGATTG
TATTTTGGCCTCCAACTCCTCGTCGTTCAAGTCGCGATTCATGCTCGAGA
AAGTTGGTGGGCACAGACGGCCGTTGGTCTGCAATATGCATTTTTTTATG
CCACCAGAAAAGCGGGTTGTCGAGTTGATGACTGACGGAGAAACCTGGCC
TGAGGTCTTTCCATTTCTGACAAGAGTCCTTGAGGATGTTGGCATGGTTC
CGGTAACTGCTCGCCGAGAGTCCACTGGGTGAGTCGCTATTGACCCAGAT
TAAACCCTCTCCCCCTCTTCTCCGCAGGATGCGAGGCTAATAGGAGCCAA
CAGTTTCGTTTTCAATCGCCTCTGGGCAGCCATTAAGCGCGAAGTTATAA
CCATCTTGGCCGAAGAAGTCTCCGAACCGAAAGAGATCGACAAGATCTGG
GTTGAGATGTTTCACAATGCGGCTGGGCCTTGTACCTTTATGGATCAGGT
TGGCCTGGATACTGTTGCATTCATTGAAGACCATTATATCGAGGAGCGCC
AATTAGGTTCTACGTTGACCGTTGACTGGCTACGCAAAAACTATGTCAAT
CAAGGGAAACTGGGCAATAAAAGTGACAAGGGCGGCCTCTACCCTCCTCA
ACCTGCAGTTAATTCTTCAAATCTGCCCACAGTCTACTTCCTCGATATTG
GACTGGGTTCAATTGTACAGGATCTTTCGGCACTTGGAAAGTCGGGTCGC
ATCCTCCGACGAACCAATGATGGAGAGTGCGAAACACTCATCACCAACTT
GAACTGTCCTGACGGGATTGACTATTCGCCCTCTGTTGGGCGCATTTTCT
GGACAAACATGGGAATGAGACCGGCCGCAAACGATGGCTCCGTCATGTCT
GCCAACTTGGACGGCAGCGACGTACAGGTCGTGCTACCAGAAGGCGCCGT
GCATACACCCAAGCAACTTGTTGTGGACGACACGAACCAAAAGCTTTACT
TCTGCGATAGGGAGGGAATGCGCATCCACCGGTGTGATTTCGATGGTCAA
AACCATGAAATTTTGGTGTGCAGGGGTGATTTTGGTACCGAAGACCAGAA
TGACCAAACCCGTTGGTGTGTTGGAATTACCATTGATGAAACGCGCGGCA
AGATTTATTGGTCTCAGAAGGGTCCCTCTAAGTCGAATCAGGGACGCATT
TTCCGTGCAAATATCAAGATGCCTGCTGGTGAGACGGCTATCAACCGAAC
AGATATTGAATCTCTTTTTGAGGGGTTGCCTGAACCGATCGACCTCGAAA
TCGACACAGAGACTGAGACGCTCTATTGGACCGACCGCGGGGAGCACCCG
TATGGCAACACATTGAACCAGGCATCCGTTGGCGCGGGGAAACCTCATCT
AAAGATATTGGCCCGTCATTTTAACGAGCTTATCGGGATGAAGGTTGACT
GGGCAAACCGGCAAATTTACCTCAGTGACTTGGGAGGATCTCTATATAGG
GTTGATATGGATGGGTCCAACAAGACTGTCCTCCATAGCGACGAGGGTAC
CTACTCTGGTATCACTTTGGTTTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2050584..2052458-

>CAN33_25035-T1 ID=CAN33_25035-T1|Name=CAN33_25035-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3600bp|location=Sequence derived from alignment at NKJJ01000002.1:2050584..2052458- (Aspergillus niger FDAARGOS_311)
TTTCGTTTTCAATCGCCTCTGGGCAGCCATTAAGCGCGAAGTTATAACCA
TCTTGGCCGAAGAAGTCTCCGAACCGAAAGAGATCGACAAGATCTGGGTT
GAGATGTTTCACAATGCGGCTGGGCCTTGTACCTTTATGGATCAGGTTGG
CCTGGATACTGTTGCATTCATTGAAGACCATTATATCGAGGAGCGCCAAT
TAGGTTCTACGTTGACCGTTGACTGGCTACGCAAAAACTATGTCAATCAA
GGGAAACTGGGCAATAAAAGTGACAAGGGCGGCCTCTACCCTCCTCAACC
TGCAGTTAATTCTTCAAATCTGCCCACAGTCTACTTCCTCGATATTGGAC
TGGGTTCAATTGTACAGGATCTTTCGGCACTTGGAAAGTCGGGTCGCATC
CTCCGACGAACCAATGATGGAGAGTGCGAAACACTCATCACCAACTTGAA
CTGTCCTGACGGGATTGACTATTCGCCCTCTGTTGGGCGCATTTTCTGGA
CAAACATGGGAATGAGACCGGCCGCAAACGATGGCTCCGTCATGTCTGCC
AACTTGGACGGCAGCGACGTACAGGTCGTGCTACCAGAAGGCGCCGTGCA
TACACCCAAGCAACTTGTTGTGGACGACACGAACCAAAAGCTTTACTTCT
GCGATAGGGAGGGAATGCGCATCCACCGGTGTGATTTCGATGGTCAAAAC
CATGAAATTTTGGTGTGCAGGGGTGATTTTGGTACCGAAGACCAGAATGA
CCAAACCCGTTGGTGTGTTGGAATTACCATTGATGAAACGCGCGGCAAGA
TTTATTGGTCTCAGAAGGGTCCCTCTAAGTCGAATCAGGGACGCATTTTC
CGTGCAAATATCAAGATGCCTGCTGGTGAGACGGCTATCAACCGAACAGA
TATTGAATCTCTTTTTGAGGGGTTGCCTGAACCGATCGACCTCGAAATCG
ACACAGAGACTGAGACGCTCTATTGGACCGACCGCGGGGAGCACCCGTAT
GGCAACACATTGAACCAGGCATCCGTTGGCGCGGGGAAACCTCATCTAAA
GATATTGGCCCGTCATTTTAACGAGCTTATCGGGATGAAGGTTGACTGGG
CAAACCGGCAAATTTACCTCAGTGACTTGGGAGGATCTCTATATAGGGTT
GATATGGATGGGTCCAACAAGACTGTCCTCCATAGCGACGAGGGTACCTA
CTCTGGTATCACTTTGGTTTGAATGCATTCATCATGGACACCGCCTCCTA
TCGGCTCCAGGCCTCTTGCACTCCTCGGTGCGGGTGTTTTGGGCCGTCGA
ATCGCCTGTGTCTTTGCCGCAGCAGGATACAACGTCAATCTATACGACCC
GTCTCTCAGCGCACAACAGGCCGCGCTGGACTACGTCACGCAAAATCTGA
AAACGTATTCGAAGTTTTCCAAAGGGAACCGCCGCTTCGGCCACTGTCGC
GCGTTCTCCGACCTTGAAAGCACTGTGAGCGACGCCTGGTTGGTCATTGA
AGCAGTTCCCGAACATCTACAAATGAAGATTGATGTCATGGGCGAGCTCG
ACAAGTTAGCGCCGGTGGATTGTATTTTGGCCTCCAACTCCTCGTCGTTC
AAGTCGCGATTCATGCTCGAGAAAGTTGGTGGGCACAGACGGCCGTTGGT
CTGCAATATGCATTTTTTTATGCCACCAGAAAAGCGGGTTGTCGAGTTGA
TGACTGACGGAGAAACCTGGCCTGAGGTCTTTCCATTTCTGACAAGAGTC
CTTGAGGATGTTGGCATGGTTCCGGTAACTGCTCGCCGAGAGTCCACTGG
TTTCGTTTTCAATCGCCTCTGGGCAGCCATTAAGCGCGAAGTTATAACCA
TCTTGGCCGAAGAAGTCTCCGAACCGAAAGAGATCGACAAGATCTGGGTT
GAGATGTTTCACAATGCGGCTGGGCCTTGTACCTTTATGGATCAGGTTGG
CCTGGATACTGTTGCATTCATTGAAGACCATTATATCGAGGAGCGCCAAT
TAGGTTCTACGTTGACCGTTGACTGGCTACGCAAAAACTATGTCAATCAA
GGGAAACTGGGCAATAAAAGTGACAAGGGCGGCCTCTACCCTCCTCAACC
TGCAGTTAATTCTTCAAATCTGCCCACAGTCTACTTCCTCGATATTGGAC
TGGGTTCAATTGTACAGGATCTTTCGGCACTTGGAAAGTCGGGTCGCATC
CTCCGACGAACCAATGATGGAGAGTGCGAAACACTCATCACCAACTTGAA
CTGTCCTGACGGGATTGACTATTCGCCCTCTGTTGGGCGCATTTTCTGGA
CAAACATGGGAATGAGACCGGCCGCAAACGATGGCTCCGTCATGTCTGCC
AACTTGGACGGCAGCGACGTACAGGTCGTGCTACCAGAAGGCGCCGTGCA
TACACCCAAGCAACTTGTTGTGGACGACACGAACCAAAAGCTTTACTTCT
GCGATAGGGAGGGAATGCGCATCCACCGGTGTGATTTCGATGGTCAAAAC
CATGAAATTTTGGTGTGCAGGGGTGATTTTGGTACCGAAGACCAGAATGA
CCAAACCCGTTGGTGTGTTGGAATTACCATTGATGAAACGCGCGGCAAGA
TTTATTGGTCTCAGAAGGGTCCCTCTAAGTCGAATCAGGGACGCATTTTC
CGTGCAAATATCAAGATGCCTGCTGGTGAGACGGCTATCAACCGAACAGA
TATTGAATCTCTTTTTGAGGGGTTGCCTGAACCGATCGACCTCGAAATCG
ACACAGAGACTGAGACGCTCTATTGGACCGACCGCGGGGAGCACCCGTAT
GGCAACACATTGAACCAGGCATCCGTTGGCGCGGGGAAACCTCATCTAAA
GATATTGGCCCGTCATTTTAACGAGCTTATCGGGATGAAGGTTGACTGGG
CAAACCGGCAAATTTACCTCAGTGACTTGGGAGGATCTCTATATAGGGTT
GATATGGATGGGTCCAACAAGACTGTCCTCCATAGCGACGAGGGTACCTA
CTCTGGTATCACTTTGGTTTGAATGCATTCATCATGGACACCGCCTCCTA
TCGGCTCCAGGCCTCTTGCACTCCTCGGTGCGGGTGTTTTGGGCCGTCGA
ATCGCCTGTGTCTTTGCCGCAGCAGGATACAACGTCAATCTATACGACCC
GTCTCTCAGCGCACAACAGGCCGCGCTGGACTACGTCACGCAAAATCTGA
AAACGTATTCGAAGTTTTCCAAAGGGAACCGCCGCTTCGGCCACTGTCGC
GCGTTCTCCGACCTTGAAAGCACTGTGAGCGACGCCTGGTTGGTCATTGA
AGCAGTTCCCGAACATCTACAAATGAAGATTGATGTCATGGGCGAGCTCG
ACAAGTTAGCGCCGGTGGATTGTATTTTGGCCTCCAACTCCTCGTCGTTC
AAGTCGCGATTCATGCTCGAGAAAGTTGGTGGGCACAGACGGCCGTTGGT
CTGCAATATGCATTTTTTTATGCCACCAGAAAAGCGGGTTGTCGAGTTGA
TGACTGACGGAGAAACCTGGCCTGAGGTCTTTCCATTTCTGACAAGAGTC
CTTGAGGATGTTGGCATGGTTCCGGTAACTGCTCGCCGAGAGTCCACTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25035CAN33_25035Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25035-T1CAN33_25035-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25035-T1.cdsCAN33_25035-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25035-T1.exon2CAN33_25035-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25035-T1.exon1CAN33_25035-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR006176
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR011042
DBxrefInterPro:IPR000033
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Product3-hydroxyacyl-CoA dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2050584..2052458 -
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