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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2096610..2098910- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25110-T1 ID=CAN33_25110-T1|Name=CAN33_25110-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2301bp|location=Sequence derived from alignment at NKJJ01000002.1:2096610..2098910- (Aspergillus niger FDAARGOS_311)
ATGGCTTGTATATCCTTCATCATCACAATGCGCAGTCAGAAGGGTGCCAC
TACTTTAGTGTGAGTGTTTGGCGCGCAAAATGTCGCATGGGCAGGGGGAA
TATCCGAGGAATAAAATACCAACTATCTAGGAGTTCGTGAAACCAACGGC
GGGTGGGCCGTTCCTCGTTCCTCGCCCCTACGAGCCAAGCAGGGTCCAAG
CCGATCCGTGGTGGAGATACTCTCTCAACTCCTAAGCTCCTGTCAGTCTC
CTCTCCGACTCTTCCGCAACAAACCCTCCCCCTCCCCACCCAATTCCCAC
TGTCGACCTTGACAACTATATGCGTCATCCAGCCGCAGATATGATTGATT
AACCTGAAAGCATTTCTCATCTCGGACTCTATAGCCACAATAATGCCGAA
GACATCTTCCCTTGGCCTGTGCCGTTCGGGTCATGGCAGGCCGAGACAAC
TAATATCCGGAAAGATCGGCGCGCGGTTAATATCGAACCGTGTGGAGACA
GTGGCCGGGCTACTTTGACTTGCGTCAGCTTGTCCTATAGCGAGTCATGC
CATTGCGGGATGTCCGTGGGCATAATAACGGTTACTGAATAGTGTTATTC
GATTTCACACTCCTGTTGGTGGAGTAATAGAGAGCTTTGCGGAGACTATG
CCTCTGTCTCAGGGTCTTCTATTTTAGGGGGATTGGGTGGAGTTTGCATA
TATAATTCCTGGTGACGCTGCGGAATGCTGATTTTGCTAAAGAAGAAAAG
AGCTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCCACGTCCTC
GTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCCCAACTAAC
GGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTGAAGA
CCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCACCGATGTG
GGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTCTCAT
TTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTCTCTGGAAA
ATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACCGGGACTCT
TCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGCAGAGATTT
CGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAGCGGGTACC
TTTACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGCACATTTCC
GGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGACTCGCCTAT
GTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTACAATATGG
CCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATGTCTATGGC
GACAATATGTGGATTCACGATGTGACTTCCGCTGCCCCAAGAACTTAATT
TTGTATTGAGATAAGCTAATGATATGGTAGATTATGGTCACCAACAAGGA
CGAATGTGTCACAACCAAGGTTAGTGAATAGCAATATCTCCCAACTACCA
AAGTACTAATTCTGATTGCAACAGACCAACTCCCACAACTTCCTAATTGA
GAACATCTACTGCAACTCCAGCGGCGGATGCGCCATCGGATCCCTCGGTT
CCGGTGCCAACGTCAGCAACATCGTCTACCGCAACGTCTACACATGGGAC
TCGAATCAGATGATGATGATCAAGAGCAACGGCGGCTCGGGCGATGTATC
CAACGCCGTGTTTGAGAATTTCATCGGTCCATAAGCCAGCCCCATCCCTT
CCATTCCCCAACGCAAAAGCTAATAAGCGATAAGGCCACGGAAACGCTTA
CTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTATCGACGGCG
ACGGCATCTACTACCATAACATCACATTCCAGAACTGGACGGGAACCGCC
GTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCCGAAGACAC
ACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGTTGAAGAAG
GTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGATCGGGCTACTGT
CTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACAACTACTTATGT
GAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGATGATTTGG
CCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTATTCCGGCG
TCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGGAGTTCTTG
A back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2096610..2098910- >CAN33_25110-T1 ID=CAN33_25110-T1|Name=CAN33_25110-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7230bp|location=Sequence derived from alignment at NKJJ01000002.1:2096610..2098910- (Aspergillus niger FDAARGOS_311)
GCCACGGAAACGCTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATG
GACGCTATCGACGGCGACGGCATCTACTACCATAACATCACATTCCAGAA
CTGGACGGGAACCGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCA
TCTGCCCCGAAGACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGAC
CTGTGGGTTGAAGAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTA
TGGATCGGGCTACTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACA
CAACAACTACTTATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACT
ATGACTGATGATTTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGAT
TCCTACTATTCCGGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCG
TGGCTGGGAGTTCTTGAACCAACTCCCACAACTTCCTAATTGAGAACATC
TACTGCAACTCCAGCGGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGC
CAACGTCAGCAACATCGTCTACCGCAACGTCTACACATGGGACTCGAATC
AGATGATGATGATCAAGAGCAACGGCGGCTCGGGCGATGTATCCAACGCC
GTGTTTGAGAATTTCATCGATTATGGTCACCAACAAGGACGAATGTGTCA
CAACCAAGAAGAAAAGAGCTATCGCACTTCACTCATCATCGGCACCATGA
CCTGGCCCACGTCCTCGTGGCAATTTCTTTGCTTTCCATCACCACCTCGA
TCCATGCCCAACTAACGGGATCAGTTGGACCCCTGACCTCCGTTTCAGAC
AAGGCCGCTGTGAAGACCTGCAATGTCCTCGACTACGGAGCCAGGTCGGA
CAATACCACCGATGTGGGACAGCCCATTATCGACGCTTTCGCTGACTGCG
GTAGCGGTGGTCTCATTTATATCCCTGAGGGTGACTATCTCTTGAAAAAC
TGGATCTCTCTGGAAAATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGT
GCTTTACCGGGACTCTTCGCCCTCCTCCCAGTCGTACATGTTCGAGATCT
CCGGTGGCAGAGATTTCGAGCTGTTTAGTTCAAATGCGACAGGTGCTATT
CAAGGTAGCGGGTACCTTTACCACCGAGATGATACGTACACTGGTCCCCG
GATGCTGCACATTTCCGGGGTGTCGGATTGGTCTGTTCATGACCTGGTGT
TGGTAGACTCGCCTATGTTCCACTTTGTCATCGACGGCGGTTACAATGGA
GAAGTGTACAATATGGCCATCCGTGGTGCTGATCACGGTGGTCTGGATGG
TATCGATGTCTATGGCGACAATATGTGGATTCACGATATGGCTTGTATAT
CCTTCATCATCACAATGCGCAGTCAGAAGGGTGCCACTACTTTAGTGCCA
CGGAAACGCTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACG
CTATCGACGGCGACGGCATCTACTACCATAACATCACATTCCAGAACTGG
ACGGGAACCGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTG
CCCCGAAGACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGT
GGGTTGAAGAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGA
TCGGGCTACTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACACAAC
AACTACTTATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGA
CTGATGATTTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCT
ACTATTCCGGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGC
TGGGAGTTCTTGAACCAACTCCCACAACTTCCTAATTGAGAACATCTACT
GCAACTCCAGCGGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGCCAAC
GTCAGCAACATCGTCTACCGCAACGTCTACACATGGGACTCGAATCAGAT
GATGATGATCAAGAGCAACGGCGGCTCGGGCGATGTATCCAACGCCGTGT
TTGAGAATTTCATCGATTATGGTCACCAACAAGGACGAATGTGTCACAAC
CAAGAAGAAAAGAGCTATCGCACTTCACTCATCATCGGCACCATGACCTG
GCCCACGTCCTCGTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCA
TGCCCAACTAACGGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGG
CCGCTGTGAAGACCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAAT
ACCACCGATGTGGGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAG
CGGTGGTCTCATTTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGA
TCTCTCTGGAAAATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTT
TACCGGGACTCTTCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGG
TGGCAGAGATTTCGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAG
GTAGCGGGTACCTTTACCACCGAGATGATACGTACACTGGTCCCCGGATG
CTGCACATTTCCGGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGT
AGACTCGCCTATGTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAG
TGTACAATATGGCCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATC
GATGTCTATGGCGACAATATGTGGATTCACGATATGGCTTGTATATCCTT
CATCATCACAATGCGCAGTCAGAAGGGTGCCACTACTTTAGTGCCACGGA
AACGCTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTAT
CGACGGCGACGGCATCTACTACCATAACATCACATTCCAGAACTGGACGG
GAACCGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCC
GAAGACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGT
TGAAGAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGATCGG
GCTACTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACAACT
ACTTATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGA
TGATTTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTA
TTCCGGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGG
AGTTCTTGAACCAACTCCCACAACTTCCTAATTGAGAACATCTACTGCAA
CTCCAGCGGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGCCAACGTCA
GCAACATCGTCTACCGCAACGTCTACACATGGGACTCGAATCAGATGATG
ATGATCAAGAGCAACGGCGGCTCGGGCGATGTATCCAACGCCGTGTTTGA
GAATTTCATCGATTATGGTCACCAACAAGGACGAATGTGTCACAACCAAG
AAGAAAAGAGCTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCC
ACGTCCTCGTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCC
CAACTAACGGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGC
TGTGAAGACCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCA
CCGATGTGGGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGT
GGTCTCATTTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTC
TCTGGAAAATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACC
GGGACTCTTCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGC
AGAGATTTCGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAG
CGGGTACCTTTACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGC
ACATTTCCGGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGAC
TCGCCTATGTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTA
CAATATGGCCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATG
TCTATGGCGACAATATGTGGATTCACGATATGGCTTGTATATCCTTCATC
ATCACAATGCGCAGTCAGAAGGGTGCCACTACTTTAGTGCCACGGAAACG
CTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTATCGAC
GGCGACGGCATCTACTACCATAACATCACATTCCAGAACTGGACGGGAAC
CGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCCGAAG
ACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGTTGAA
GAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGATCGGGCTA
CTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACAACTACTT
ATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGATGAT
TTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTATTCC
GGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGGAGTT
CTTGAACCAACTCCCACAACTTCCTAATTGAGAACATCTACTGCAACTCC
AGCGGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGCCAACGTCAGCAA
CATCGTCTACCGCAACGTCTACACATGGGACTCGAATCAGATGATGATGA
TCAAGAGCAACGGCGGCTCGGGCGATGTATCCAACGCCGTGTTTGAGAAT
TTCATCGATTATGGTCACCAACAAGGACGAATGTGTCACAACCAAGAAGA
AAAGAGCTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCCACGT
CCTCGTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCCCAAC
TAACGGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTG
AAGACCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCACCGA
TGTGGGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTC
TCATTTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTCTCTG
GAAAATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACCGGGA
CTCTTCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGCAGAG
ATTTCGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAGCGGG
TACCTTTACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGCACAT
TTCCGGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGACTCGC
CTATGTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTACAAT
ATGGCCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATGTCTA
TGGCGACAATATGTGGATTCACGATATGGCTTGTATATCCTTCATCATCA
CAATGCGCAGTCAGAAGGGTGCCACTACTTTAGTGCCACGGAAACGCTTA
CTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTATCGACGGCG
ACGGCATCTACTACCATAACATCACATTCCAGAACTGGACGGGAACCGCC
GTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCCGAAGACAC
ACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGTTGAAGAAG
GTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGATCGGGCTACTGT
CTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACAACTACTTATGT
GAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGATGATTTGG
CCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTATTCCGGCG
TCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGGAGTTCTTG
AACCAACTCCCACAACTTCCTAATTGAGAACATCTACTGCAACTCCAGCG
GCGGATGCGCCATCGGATCCCTCGGTTCCGGTGCCAACGTCAGCAACATC
GTCTACCGCAACGTCTACACATGGGACTCGAATCAGATGATGATGATCAA
GAGCAACGGCGGCTCGGGCGATGTATCCAACGCCGTGTTTGAGAATTTCA
TCGATTATGGTCACCAACAAGGACGAATGTGTCACAACCAAGAAGAAAAG
AGCTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCCACGTCCTC
GTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCCCAACTAAC
GGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTGAAGA
CCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCACCGATGTG
GGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTCTCAT
TTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTCTCTGGAAA
ATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACCGGGACTCT
TCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGCAGAGATTT
CGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAGCGGGTACC
TTTACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGCACATTTCC
GGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGACTCGCCTAT
GTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTACAATATGG
CCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATGTCTATGGC
GACAATATGTGGATTCACGATATGGCTTGTATATCCTTCATCATCACAAT
GCGCAGTCAGAAGGGTGCCACTACTTTAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| DBxref | PFAM:PF00295 |
| Product | Glycosyl hydrolases family 28 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2096610..2098910 - |
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