You are here

Home

CAN33_25120-T1, CAN33_25120-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25120-T1
Unique NameCAN33_25120-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2104700..2105870+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25120-T1 ID=CAN33_25120-T1|Name=CAN33_25120-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1171bp|location=Sequence derived from alignment at NKJJ01000002.1:2104700..2105870+ (Aspergillus niger FDAARGOS_311)
ATGGTCGAGAAACACGAGTTTCGCGGTATTGCATCTCTTCCCCAGGAAGT
ATACGATGAGGTAAAATCCCAGATCGCACCTAACCACAGTGCCTTCCTAA
TCATGTATTCAGATCACACTTTTCTTTGCAAATTTTGGCCTAGATCCCAA
GGCCCGAATTACACGGTTGATGTGCCTGCGTTTAGTCAGTGTGCCGTTTA
ATAGAAGCGCCACTCGAGTTCTGTTAAGTGCCGTACGCTTAAGTGTGGGT
CGCCTGTTAGAGACGCCTCAACTTCTCCAGGCGCAGTCTCCGAGCAGCAT
AAAGCCCATATTTACGAGCGACCTTTGTCATTCCATTCGATACCTCACGG
TCTGTTCCTCTCAAGCGTGCACAAACACCGTGGAGCGACCATATGGCAAC
CTTTATCAATGCCTTAAAAGACTCCCTTCGTTACAGTACTTTGAAATTGA
TCACAATAATTACTACTCGCACCCGCAGGTAGATCTTATGCTTTTGGCCC
TAAAACATGCGCACCAATACCTTCCCAGACTGAGAGGAATCAGAATCATT
TCACCGTGGAGCTATCTCAAGGAGGATGGGCAGCCCCGCCTCTGCAGGCT
CGAGGGTGTTCTACGCAAATACCTGCCCCAACTTCAACACATTGATATCG
AGTTCGCCTCTTGCTCGTGGTTAACTTCAGACGAGCTTGTAGAGACAACT
TTCCTTCCTCTTTTCCGTCTTGGCCGGGGGCTACGATCCATCAGCCTAGA
GGGCCTCGGCATGGGCGCCAACTGTCATAAAAAGCATAAAGCGGGACGTT
GGCTGCACCGAGACGCTCCAATCGAGCGCATACGACTCCATACCATGGTT
GTACCTTTTGAAGTCCTGGCAAGGATATTCAGATATAAGAGAACGCTGGT
GAGCCTGGACATCATGGATGTGTCTCTCTCAACGGGTGTATGGGAAGACT
TTCTCGAAGAGATCCACAAATCTCCGTTGTCATTTCGACATATCTCGTTC
GATGGTTATGTCGAACATGAGACATATGAATCTCACAACATGGAGGAAAA
TGATCCTGCGCGATCTATTTATATTATGGTAAAGCAGAAGATGCAAGCCT
GGCCCCGAAGACGGAAGATGATTCCAAGGCCGCTTGCGCGATTTAGCGAG
CATGGCCTTCACTTGCACTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:2104700..2105870+

>CAN33_25120-T1 ID=CAN33_25120-T1|Name=CAN33_25120-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2238bp|location=Sequence derived from alignment at NKJJ01000002.1:2104700..2105870+ (Aspergillus niger FDAARGOS_311)
ATGGTCGAGAAACACGAGTTTCGCGGTATTGCATCTCTTCCCCAGGAAGT
ATACGATGAGATCACACTTTTCTTTGCAAATTTTGGCCTAGATCCCAAGG
CCCGAATTACACGGTTGATGTGCCTGCGTTTAGTCAGTGTGCCGTTTAAT
AGAAGCGCCACTCGAGTTCTGTTAAGTGCCGTACGCTTAAGTGTGGGTCG
CCTGTTAGAGACGCCTCAACTTCTCCAGGCGCAGTCTCCGAGCAGCATAA
AGCCCATATTTACGAGCGACCTTTGTCATTCCATTCGATACCTCACGGTC
TGTTCCTCTCAAGCGTGCACAAACACCGTGGAGCGACCATATGGCAACCT
TTATCAATGCCTTAAAAGACTCCCTTCGTTACAGTACTTTGAAATTGATC
ACAATAATTACTACTCGCACCCGCAGGTAGATCTTATGCTTTTGGCCCTA
AAACATGCGCACCAATACCTTCCCAGACTGAGAGGAATCAGAATCATTTC
ACCGTGGAGCTATCTCAAGGAGGATGGGCAGCCCCGCCTCTGCAGGCTCG
AGGGTGTTCTACGCAAATACCTGCCCCAACTTCAACACATTGATATCGAG
TTCGCCTCTTGCTCGTGGTTAACTTCAGACGAGCTTGTAGAGACAACTTT
CCTTCCTCTTTTCCGTCTTGGCCGGGGGCTACGATCCATCAGCCTAGAGG
GCCTCGGCATGGGCGCCAACTGTCATAAAAAGCATAAAGCGGGACGTTGG
CTGCACCGAGACGCTCCAATCGAGCGCATACGACTCCATACCATGGTTGT
ACCTTTTGAAGTCCTGGCAAGGATATTCAGATATAAGAGAACGCTGGTGA
GCCTGGACATCATGGATGTGTCTCTCTCAACGGGTGTATGGGAAGACTTT
CTCGAAGAGATCCACAAATCTCCGTTGTCATTTCGACATATCTCGTTCGA
TGGTTATGTCGAACATGAGACATATGAATCTCACAACATGGAGGAAAATG
ATCCTGCGCGATCTATTTATATTATGGTAAAGCAGAAGATGCAAGCCTGG
CCCCGAAGACGGAAGATGATTCCAAGGCCGCTTGCGCGATTTAGCGAGCA
TGGCCTTCACTTGCACTAGATGGTCGAGAAACACGAGTTTCGCGGTATTG
CATCTCTTCCCCAGGAAGTATACGATGAGATCACACTTTTCTTTGCAAAT
TTTGGCCTAGATCCCAAGGCCCGAATTACACGGTTGATGTGCCTGCGTTT
AGTCAGTGTGCCGTTTAATAGAAGCGCCACTCGAGTTCTGTTAAGTGCCG
TACGCTTAAGTGTGGGTCGCCTGTTAGAGACGCCTCAACTTCTCCAGGCG
CAGTCTCCGAGCAGCATAAAGCCCATATTTACGAGCGACCTTTGTCATTC
CATTCGATACCTCACGGTCTGTTCCTCTCAAGCGTGCACAAACACCGTGG
AGCGACCATATGGCAACCTTTATCAATGCCTTAAAAGACTCCCTTCGTTA
CAGTACTTTGAAATTGATCACAATAATTACTACTCGCACCCGCAGGTAGA
TCTTATGCTTTTGGCCCTAAAACATGCGCACCAATACCTTCCCAGACTGA
GAGGAATCAGAATCATTTCACCGTGGAGCTATCTCAAGGAGGATGGGCAG
CCCCGCCTCTGCAGGCTCGAGGGTGTTCTACGCAAATACCTGCCCCAACT
TCAACACATTGATATCGAGTTCGCCTCTTGCTCGTGGTTAACTTCAGACG
AGCTTGTAGAGACAACTTTCCTTCCTCTTTTCCGTCTTGGCCGGGGGCTA
CGATCCATCAGCCTAGAGGGCCTCGGCATGGGCGCCAACTGTCATAAAAA
GCATAAAGCGGGACGTTGGCTGCACCGAGACGCTCCAATCGAGCGCATAC
GACTCCATACCATGGTTGTACCTTTTGAAGTCCTGGCAAGGATATTCAGA
TATAAGAGAACGCTGGTGAGCCTGGACATCATGGATGTGTCTCTCTCAAC
GGGTGTATGGGAAGACTTTCTCGAAGAGATCCACAAATCTCCGTTGTCAT
TTCGACATATCTCGTTCGATGGTTATGTCGAACATGAGACATATGAATCT
CACAACATGGAGGAAAATGATCCTGCGCGATCTATTTATATTATGGTAAA
GCAGAAGATGCAAGCCTGGCCCCGAAGACGGAAGATGATTCCAAGGCCGC
TTGCGCGATTTAGCGAGCATGGCCTTCACTTGCACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25120CAN33_25120Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25120-T1.exon1CAN33_25120-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25120-T1.exon2CAN33_25120-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25120-T1.cdsCAN33_25120-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25120-T1CAN33_25120-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2104700..2105870 +
Powered by Drupal