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CAN33_25275-T1, CAN33_25275-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25275-T1
Unique NameCAN33_25275-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2186151..2186932-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25275-T1 ID=CAN33_25275-T1|Name=CAN33_25275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=782bp|location=Sequence derived from alignment at NKJJ01000002.1:2186151..2186932- (Aspergillus niger FDAARGOS_311)
ATGGCTGTCAGGAACTCCAGTGCGTCGTCCTGTTCTGTCGATTTTTCTCG
AAGTCGCCAATCCAATCCATACTAATTTGACTTCGTGATGATTTCAGGTC
TCGCCTCTTCTCGCCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCC
AGCGAGCGCCGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGC
CAAGTACAATGTACGTTCGATCAGACCGATGTGATTCTTGTTTTTGCAGC
CCCTGGGATGTGTGTGTGTTTGGATATGGATTTGGCATGGTTTCTTTCTT
TCCGGTCGGGGACAGGCTGGATCAGGCCAGCGAGATTGGGATTTGGGAGG
AAGATACAAGAACCAGATCCAATCGACAAACATCCAATCCGAGATATCAG
GCACAACGAAACAATGCTGGGAGAAATGGTTCTAACGCAGTCGTTTTGAT
AGGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTGAGCCAAGGCTGA
TTCTAACCCGACATCTAACCCACTCGCTAAACTGTGAACAAGGTCATGGT
CGTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACC
GCCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAAC
GGCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAAGGTCGTCATCAAGAA
GCTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGG
GTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2186151..2186932-

>CAN33_25275-T1 ID=CAN33_25275-T1|Name=CAN33_25275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1620bp|location=Sequence derived from alignment at NKJJ01000002.1:2186151..2186932- (Aspergillus niger FDAARGOS_311)
GTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAG
CGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACA
AGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAAGGTCGTC
ATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGT
TGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAAGTCCGCTCCA
TGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTTCTCGCCGCAAGTCGC
GCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTCT
GCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATATGGCTGTCAGGAA
CTCCAGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTC
ACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCG
CGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAAGG
TCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAG
CGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAAGTCCG
CTCCATGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTTCTCGCCGCAA
GTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCC
TCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATATGGCTGTC
AGGAACTCCAGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGAGGGCA
AGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGCGCATC
AGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCACCCCTC
CAAGGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGCCATCC
TTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAA
GTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTTCTCGC
CGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGT
TATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATATGG
CTGTCAGGAACTCCAGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGA
GGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGC
GCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCAC
CCCTCCAAGGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGC
CATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCG
CTTAAGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTT
CTCGCCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGC
CGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAA
TATGGCTGTCAGGAACTCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL26ACAN33_25275Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25275-T1CAN33_25275-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25275-T1.cdsCAN33_25275-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25275-T1.exon4CAN33_25275-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_25275-T1.exon3CAN33_25275-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_25275-T1.exon2CAN33_25275-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25275-T1.exon1CAN33_25275-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265DAV
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041988
DBxrefInterPro:IPR005825
DBxrefInterPro:IPR005756
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR005824
DBxrefPFAM:PF16906
DBxrefPFAM:PF00467
Product60S ribosomal protein L26A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2186151..2186932 -
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