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CAN33_25410-T1, CAN33_25410-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25410-T1
Unique NameCAN33_25410-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2272336..2273609+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25410-T1 ID=CAN33_25410-T1|Name=CAN33_25410-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1274bp|location=Sequence derived from alignment at NKJJ01000002.1:2272336..2273609+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCTGCCAATTACGTATGCGCCCTGACATGCCGTGTGTGCCGCGT
GGTTGCCTGGTTTTAACGGGAAGCAGATGTCTCCCTCTTCCTCGACGACG
CCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAA
AACGTGAGTGATTTACCCCGCCTTTCCGTTGCGCGCCACGATTGCATGAT
GTACCTTGAAATCAAGTTGGGAATCTCTCTGAAAAAACAACTGAGGAGAA
TATATTAACTTGTGTTTCTGAACCCTTCGTTTGATTTTGCCTTATCATCA
TCAAGTTTACCGGTTGGTCTGCAGCTGCTAACTGTTCTCTTGAAGTGATA
TCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCT
GCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGA
GTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATA
TTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGGTAAGACAC
CTCTTCTATCTCATCCCCTACCCACCACCCTCGTTGCAAGGATTATACGA
CGTTTCATGCACCACTCAGAACATCCCTTTTGGGGTTTGTTGATAAACAA
ACATCTTCAGTCCTCAGTATGAGCAGCAAGAATAAAACATGCCGTTACTT
GTCATCACGCCTATTTCATAGCCTTTTGCTGACTTGACCGGCTTAGATCC
TAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTG
GAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGC
CCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCC
AGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCG
GATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAA
GGATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGCTC
GTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGGCTGAA
CAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGG
ACTGGGCGATAATCCCAACACCCACAACAGTGATCCCCTGGCCAGTTCGA
CCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGG
GATATCGACCCCATGATCTCATAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2272336..2273609+

>CAN33_25410-T1 ID=CAN33_25410-T1|Name=CAN33_25410-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3276bp|location=Sequence derived from alignment at NKJJ01000002.1:2272336..2273609+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGCCAACATG
GCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATA
TCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCT
GCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGA
GTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATA
TTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGAT
GAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTT
GATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTG
AGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTC
CTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAG
CCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATA
TTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGCTCGTAAA
GAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGGCTGAACAGAA
AGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGG
GCGATAATCCCAACACCCACAACAGTGATCCCCTGGCCAGTTCGACCAGT
GCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGGGATAT
CGACCCCATGATCTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTT
CCTCGACGACGCCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTG
AAACCATCCAAAACTGATATCAATTATCTAGTCATGGATTACCTCATCAC
CAATGGCTACCCAGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCC
AACCCAGGGCAGATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACT
GCGATCCATTCTGGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCT
CAACCCACAGATCCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGC
GACTGCAGCTGGTGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGC
GACGTCAGCCCTGCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGC
ACCCACCAACCCCCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCT
TAATATTCCCGGCGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACAC
CCCGACCTTCGTAAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTT
GAATCAAGGCGCTCGTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGC
GCGCGTGGGCTGAACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAG
AAGCTGGACCTTGGACTGGGCGATAATCCCAACACCCACAACAGTGATCC
CCTGGCCAGTTCGACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAA
TGACCAATAATGGGGATATCGACCCCATGATCTCATAAATGTCCTCTGCC
AATTACATGTCTCCCTCTTCCTCGACGACGCCAACATGGCATCAGTTCGA
ACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATATCAATTATCTAG
TCATGGATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTC
TCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGA
AAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCA
TTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGATGAAAATGCTCCT
TTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTTGATTCGCTCGTG
CATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTGAGTTTGCGAGCT
CGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTCCTTGAGGACCTT
GAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAGCCTGTCCCCGCC
ACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATATTGCCAACCGCG
TCAACGAAGCCATTCTGTTGAATCAAGGCGCTCGTAAAGAGGCCCGGCTA
CGCAACTTGGTTAAACTGCGCGCGTGGGCTGAACAGAAAGCCCGGGAGGC
TAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGGGCGATAATCCCA
ACACCCACAACAGTGATCCCCTGGCCAGTTCGACCAGTGCCAGTCACAAT
GGCTCTAACGACACCGTAATGACCAATAATGGGGATATCGACCCCATGAT
CTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGC
CAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAA
ACTGATATCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCC
AGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAG
ATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCT
GGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGAT
CCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGG
TGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCT
GCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCC
CCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGG
CGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGT
AAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGC
TCGTAAAGAGGCCCGGCTACGCAACTTGGTTAAACTGCGCGCGTGGGCTG
AACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTT
GGACTGGGCGATAATCCCAACACCCACAACAGTGATCCCCTGGCCAGTTC
GACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATG
GGGATATCGACCCCATGATCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25410CAN33_25410Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25410-T1.exon1CAN33_25410-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25410-T1.exon2CAN33_25410-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25410-T1.exon3CAN33_25410-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_25410-T1.exon4CAN33_25410-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25410-T1.cdsCAN33_25410-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25410-T1CAN33_25410-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264JK1
DBxrefInterPro:IPR024964
DBxrefInterPro:IPR006594
DBxrefInterPro:IPR013144
DBxrefInterPro:IPR006595
DBxrefPFAM:PF08513
DBxrefPFAM:PF10607
ProductCTLH/CRA C-terminal to LisH motif domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2272336..2273609 +
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