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CAN33_25475-T1, CAN33_25475-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25475-T1
Unique NameCAN33_25475-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2307189..2308514+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25475-T1 ID=CAN33_25475-T1|Name=CAN33_25475-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1326bp|location=Sequence derived from alignment at NKJJ01000002.1:2307189..2308514+ (Aspergillus niger FDAARGOS_311)
ATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGGAGATGGCGG
GGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGGATGAGATGA
AACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCCACACAGAAC
GGGAACCCCAACCAAGGCGACGGCTCCTCCGATGGCACCGTCAAGCCGGA
CAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGGCGGCAAACC
CGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGAGTCAAGCGC
AAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCCTGCTCTGCT
CATATCGGACTTGTATTGGTGGACCACGGATGACGACATCCGCGGCTGGG
TGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACGTTCAGCGAA
CACAAAGTGAACGGTAAAAGCAAAGGGTAAGAGGGCAGCAGGAAGCTGGA
AGCAGCGGTGAAACATCAGTCCACTGACGTGGTGTTAATAGACAAGCGTT
CCTCGAATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGATCG
AGTCATTCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTACACC
AGCCCGCAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCG
CAAGGACAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACC
CGAACATGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTATCGG
GGCGGACGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCATGGG
TGGTAACTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCTTCC
AAGGGCCGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAG
AACTACGGCTTCAACAACCGCGGGGGCATGATGGGCGGTATGCGCGGTGG
CCCTGGAGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATATGA
TGGGGATGCCCGGAATGAATCCGATGGGAGGGATGGGGATGAATGCGATG
CCGGGGGCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGGGAT
GCAGGGTGAGTAGATTCCAGCATAGTGTGCGTGTGCTTTATGCTGATAGC
AGAGCAGGACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGGG
ATTCTTTCCTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCATG
GGGCCAAGCGCAGTCGCCAGGAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2307189..2308514+

>CAN33_25475-T1 ID=CAN33_25475-T1|Name=CAN33_25475-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3627bp|location=Sequence derived from alignment at NKJJ01000002.1:2307189..2308514+ (Aspergillus niger FDAARGOS_311)
ATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGGAGATGGCGG
GGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGGATGAGATGA
AACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCCACACAGAAC
GGGAACCCCAACCAAGGCGACGGCTCCTCCGATGGCACCGTCAAGCCGGA
CAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGGCGGCAAACC
CGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGAGTCAAGCGC
AAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCCTGCTCTGCT
CATATCGGACTTGTATTGGTGGACCACGGATGACGACATCCGCGGCTGGG
TGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACGTTCAGCGAA
CACAAAGTGAACGGTAAAAGCAAAGGACAAGCGTTCCTCGAATTCACCAC
TCTCCAGGCAGCTACAGCGACGAAACACAAGATCGAGTCATTCAGCGCCG
GCGGACAAACGCGCAAGCACATGGTCACCTACACCAGCCCGCAACCGAAC
CCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCGCAAGGACAACCAGGC
GCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACCCGAACATGAACTTTA
GCGGTGGCATGAACAACATGGGCGGAGGCTATCGGGGCGGACGCGGTGGA
TACAACAACCGCGGCGGCATGTCCGGCGGCATGGGTGGTAACTTCGGCAA
CAACCGTAACTTCCAGAACCCGATGGGTGGCTTCCAAGGGCCGATGGTGG
GCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAGAACTACGGCTTCAAC
AACCGCGGGGGCATGATGGGCGGTATGCGCGGTGGCCCTGGAGGCATGCG
CGGTCGTGGTGGTGGCATGGCAGGACCCAATATGATGGGGATGCCCGGAA
TGAATCCGATGGGAGGGATGGGGATGAATGCGATGCCGGGGGCAATGAAT
CCGATGATGGGAGGTATGACGGGCAACATGGGGATGCAGGGACAAGGTGG
ATTCCAGGGCCCCAACCCAGCCTTTAACCAGGGATTCTTTCCTCCCAACC
AGGGCGTCGGCGATGGATCATGGAACCCTCATGGGGCCAAGCGCAGTCGC
CAGGAGTGAATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGG
AGATGGCGGGGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGG
ATGAGATGAAACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCC
ACACAGAACGGGAACCCCAACCAAGGCGACGGCTCCTCCGATGGCACCGT
CAAGCCGGACAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGG
CGGCAAACCCGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGA
GTCAAGCGCAAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCC
TGCTCTGCTCATATCGGACTTGTATTGGTGGACCACGGATGACGACATCC
GCGGCTGGGTGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACG
TTCAGCGAACACAAAGTGAACGGTAAAAGCAAAGGACAAGCGTTCCTCGA
ATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGATCGAGTCAT
TCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTACACCAGCCCG
CAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCGCAAGGA
CAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACCCGAACA
TGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTATCGGGGCGGA
CGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCATGGGTGGTAA
CTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCTTCCAAGGGC
CGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAGAACTAC
GGCTTCAACAACCGCGGGGGCATGATGGGCGGTATGCGCGGTGGCCCTGG
AGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATATGATGGGGA
TGCCCGGAATGAATCCGATGGGAGGGATGGGGATGAATGCGATGCCGGGG
GCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGGGATGCAGGG
ACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGGGATTCTTTC
CTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCATGGGGCCAAG
CGCAGTCGCCAGGAGTGAATGGCTACCGAAGATGATAACTTCGATATTGA
CATCTATGGAGATGGCGGGGGCTACAACGCCAATGAGCAGGGCGACTTTA
AGCCCGAGGATGAGATGAAACATGATGACACAGAGCTTATCCTAGATGCG
CCGGAACCCACACAGAACGGGAACCCCAACCAAGGCGACGGCTCCTCCGA
TGGCACCGTCAAGCCGGACAGTGAAGGCGGCGCTCCCCATAGTGACCCTG
TAACCCAGGCGGCAAACCCGCAATCCGCGGCCAAGGACGCCCCTGCTCCC
CAGCAGGGAGTCAAGCGCAAGGAGCACGATGATCGACCGACAGACCCTGA
TGCTACCCCTGCTCTGCTCATATCGGACTTGTATTGGTGGACCACGGATG
ACGACATCCGCGGCTGGGTGTGCCAGGCGGACTGCGAGGATGAACTGAAG
GACGTAACGTTCAGCGAACACAAAGTGAACGGTAAAAGCAAAGGACAAGC
GTTCCTCGAATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGA
TCGAGTCATTCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTAC
ACCAGCCCGCAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGAT
GCGCAAGGACAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCA
ACCCGAACATGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTAT
CGGGGCGGACGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCAT
GGGTGGTAACTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCT
TCCAAGGGCCGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATG
CAGAACTACGGCTTCAACAACCGCGGGGGCATGATGGGCGGTATGCGCGG
TGGCCCTGGAGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATA
TGATGGGGATGCCCGGAATGAATCCGATGGGAGGGATGGGGATGAATGCG
ATGCCGGGGGCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGG
GATGCAGGGACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGG
GATTCTTTCCTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCAT
GGGGCCAAGCGCAGTCGCCAGGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25475CAN33_25475Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25475-T1.exon1CAN33_25475-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25475-T1.exon2CAN33_25475-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25475-T1.exon3CAN33_25475-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25475-T1.cdsCAN33_25475-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25475-T1CAN33_25475-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
ProductRNA recognition motif (RRM RBD or RNP domain) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2307189..2308514 +
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