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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2343071..2344504+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25530-T1 ID=CAN33_25530-T1|Name=CAN33_25530-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1434bp|location=Sequence derived from alignment at NKJJ01000002.1:2343071..2344504+ (Aspergillus niger FDAARGOS_311)
ATGTCTAAAAAGCCCGCCGATGTGGCGTCGAAAGAGCGCAACGAATACAT
TCCGTCTTTCATTTCGAAAAAGCCGTTCTACATTGACGACGACTCTCAAG
CCAATGACTATCTAGAGCATCAACGTCTGCAAAAGTCGACGGCAGAGCAG
TCAAAATGGTACGAGCGCGGCAAGCGTGCTGGTCCCGCGGCCACCAAGTA
CCGGAAAGGCGCCTGTGAGAACTGCGGCGCCATGACCCACAAAACGAAAG
AGTGTCTGAGTCGCCCTCGGAAGCACGGTGCCAAATGGACCGGTAAAGAT
ATCCAGGCGGATGAAGTCATACAAGACGTCAACATGGGGTGGGATGCGAA
GAGAGATCGGTGGAACGGCTACGATCCGAGCGAATATCGACAAGTGGTGG
AGGAATACGAGGAACTTGAGAAATTGAAACGGGTCACAAAACAGGATGGC
GATAATGAGGGCAAGGATGGTGAGGGCGATGACGATGAAGATGCGCCCCA
GGAGGAAGCCCGCTACGCTGAGGAGTCCGACATGGGAAGACAACAGAGCA
CCGCCACTCGCAACCTCCGTATCCGAGAAGATACGGCAAAGTATTTGCTG
AACTTAGACCTTGATTCAGCCAAGTACGACCCGAAGACACGACGGATGGT
TGATATGGGTGCACAGGATGACCAAGCAGCAGCACTTGTTGCCGAGGAGA
ACTTTGTCCGCGCTTCGGGTGATGCTGCAGAGTTTGAGAAGGCACAAAGA
TATGCCTGGGAATCGCAGGAACGTGGTGCGCAGAAGGTCCACCTGCAGGC
AAACCCCACAGCTGGAGAAGTCATGCGGAAGAAGGAGGAGGCGGAGAGTT
TGGCCAAACGTGATGCTCAACGAAAGGCTCTTTTGGAAAAGTATGGTGGT
CAAGAGCACCTCGACCCCACACCGCTGCGGGATACAATGGTCGTCGAGAA
CGAACAGTTTGTCGAATATGACGAAACGGGTGCGATTAAGGGCGCACCAA
AGAAGGCGGCCAAATCGAAATATGCTGAAGACATCTTTACGAACAACCAC
ACATGCGTTTGGGGAAGTTGGTGGCACAACTTTGAGTGGGGATATGCCTG
CTGCTTTTCTACCGTCAAAAACAGTTACTGTACTGGTGAAGATGGGAAGC
GCGCATTCCAGGAAGCGGATCAGCTGCTGATGCTACCTGAGAACGGGGAC
GATGCTGATGAGCCGTCCGGTGAACATGAGGAAGCTAACGACGGGCATGA
AACTATTGACGATGCTCAAACCTCAGAGCAGCCAAAGGATTCATCTAACA
CCAATACGAAGAAGAGAACGCTCATCGAGGTGCAGTCTGGCATTACCGAG
GAAGAAATCGAATCATACAAGCGAAGCCGACTTGCGGCGGACGATCCTAT
GGCCGCATTCATCGGCAAAGACGACCTTGTATAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2343071..2344504+ >CAN33_25530-T1 ID=CAN33_25530-T1|Name=CAN33_25530-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1434bp|location=Sequence derived from alignment at NKJJ01000002.1:2343071..2344504+ (Aspergillus niger FDAARGOS_311)
ATGTCTAAAAAGCCCGCCGATGTGGCGTCGAAAGAGCGCAACGAATACAT
TCCGTCTTTCATTTCGAAAAAGCCGTTCTACATTGACGACGACTCTCAAG
CCAATGACTATCTAGAGCATCAACGTCTGCAAAAGTCGACGGCAGAGCAG
TCAAAATGGTACGAGCGCGGCAAGCGTGCTGGTCCCGCGGCCACCAAGTA
CCGGAAAGGCGCCTGTGAGAACTGCGGCGCCATGACCCACAAAACGAAAG
AGTGTCTGAGTCGCCCTCGGAAGCACGGTGCCAAATGGACCGGTAAAGAT
ATCCAGGCGGATGAAGTCATACAAGACGTCAACATGGGGTGGGATGCGAA
GAGAGATCGGTGGAACGGCTACGATCCGAGCGAATATCGACAAGTGGTGG
AGGAATACGAGGAACTTGAGAAATTGAAACGGGTCACAAAACAGGATGGC
GATAATGAGGGCAAGGATGGTGAGGGCGATGACGATGAAGATGCGCCCCA
GGAGGAAGCCCGCTACGCTGAGGAGTCCGACATGGGAAGACAACAGAGCA
CCGCCACTCGCAACCTCCGTATCCGAGAAGATACGGCAAAGTATTTGCTG
AACTTAGACCTTGATTCAGCCAAGTACGACCCGAAGACACGACGGATGGT
TGATATGGGTGCACAGGATGACCAAGCAGCAGCACTTGTTGCCGAGGAGA
ACTTTGTCCGCGCTTCGGGTGATGCTGCAGAGTTTGAGAAGGCACAAAGA
TATGCCTGGGAATCGCAGGAACGTGGTGCGCAGAAGGTCCACCTGCAGGC
AAACCCCACAGCTGGAGAAGTCATGCGGAAGAAGGAGGAGGCGGAGAGTT
TGGCCAAACGTGATGCTCAACGAAAGGCTCTTTTGGAAAAGTATGGTGGT
CAAGAGCACCTCGACCCCACACCGCTGCGGGATACAATGGTCGTCGAGAA
CGAACAGTTTGTCGAATATGACGAAACGGGTGCGATTAAGGGCGCACCAA
AGAAGGCGGCCAAATCGAAATATGCTGAAGACATCTTTACGAACAACCAC
ACATGCGTTTGGGGAAGTTGGTGGCACAACTTTGAGTGGGGATATGCCTG
CTGCTTTTCTACCGTCAAAAACAGTTACTGTACTGGTGAAGATGGGAAGC
GCGCATTCCAGGAAGCGGATCAGCTGCTGATGCTACCTGAGAACGGGGAC
GATGCTGATGAGCCGTCCGGTGAACATGAGGAAGCTAACGACGGGCATGA
AACTATTGACGATGCTCAAACCTCAGAGCAGCCAAAGGATTCATCTAACA
CCAATACGAAGAAGAGAACGCTCATCGAGGTGCAGTCTGGCATTACCGAG
GAAGAAATCGAATCATACAAGCGAAGCCGACTTGCGGCGGACGATCCTAT
GGCCGCATTCATCGGCAAAGACGACCTTGTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262NNS |
| DBxref | InterPro:IPR021715 |
| DBxref | PFAM:PF11708 |
| Product | mRNA splicing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2343071..2344504 + |
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