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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2344814..2345779+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25535-T1 ID=CAN33_25535-T1|Name=CAN33_25535-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=966bp|location=Sequence derived from alignment at NKJJ01000002.1:2344814..2345779+ (Aspergillus niger FDAARGOS_311)
ATGCAGTCATGTGACAGGCTCACCCTTGAGGCTGTCGGCGAATCACGGGA
CCAGGGCACAAGCCCTGACAACCACAACTCGCTAAGCGACACCACCCCAG
ATCCCAGAGCAACTTCGATACGCCCAGCGACGACGACAACGACAACCAGC
CCTTCAACGGAATCGCCAGGTAGGTCCATTTTGCGCCCTCACGTGGGATT
ATTGTCATTTTTCCCCAGGCCGGGAATTTTTTTTTTATCTGGATTTTTCG
TCGCTAACAAATTGTGCCATATAGTTCCACATAATTCAAGATGAGTACGT
GCCAACGCGATATACCACCGCCCAGTCCGATCTATCGACGAGAACAATAT
CCAGACTGACATACCGATTCTGTTTACAGCGAAGGGTACCTCCAGCTTCG
GAAAGCGCCACAACAAGACTCACACTCTTTGCCGGCGTTGTGGTCAGTAT
TTTACACTACTCCGAAAATTTATATATATCCTCCGGGCGGAAATTATTAT
ATACGGGATATCTCTACAATCAACGGAACGGGAGAGAAGGAACGGAATAA
TAAATGACTGCCGGGAGAGATATATATGAAGGTTATCGGGAAACGACCAG
ATGGGCTAATACGTTCGGATTGAATTCAGGCCGCCGCTCCTTCCACGTCC
AGAAGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAG
TGTACGAATCCTTTTCCCCAAAATCCCACCATCGAAGAACAGCCGCTGGT
TCCTTGAAACCTTGGATACGGATTGTATGAAAGTGTTTGGATGAACATAT
TGGCTTACGAAGTTCGTTTTATACAGTCAACTGGAGCGAGAAGGCCAAGC
GCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAAGGAGGTCCAC
CGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGGGCGCTCGTGG
TCCCGAGAACCACTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2344814..2345779+ >CAN33_25535-T1 ID=CAN33_25535-T1|Name=CAN33_25535-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1143bp|location=Sequence derived from alignment at NKJJ01000002.1:2344814..2345779+ (Aspergillus niger FDAARGOS_311)
ATGCAGTCATGTGACAGGCTCACCCTTGAGGCTGTCGGCGAATCACGGGA
CCAGGGCACAAGCCCTGACAACCACAACTCGCTAAGCGACACCACCCCAG
ATCCCAGAGCAACTTCGATACGCCCAGCGACGACGACAACGACAACCAGC
CCTTCAACGGAATCGCCAGGCCGCCGCTCCTTCCACGTCCAGAAGTCGAC
TTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGTTCAACTGGA
GCGAGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATGCGTCAC
CTCAAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCC
CAAGGGCGCTCGTGGTCCCGAGAACCACTAGATGCAGTCATGTGACAGGC
TCACCCTTGAGGCTGTCGGCGAATCACGGGACCAGGGCACAAGCCCTGAC
AACCACAACTCGCTAAGCGACACCACCCCAGATCCCAGAGCAACTTCGAT
ACGCCCAGCGACGACGACAACGACAACCAGCCCTTCAACGGAATCGCCAG
GCCGCCGCTCCTTCCACGTCCAGAAGTCGACTTGCTCCAACTGCGGTTAC
CCTGCCGCTAAGACTCGCAAGTTCAACTGGAGCGAGAAGGCCAAGCGCAG
AAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAAGGAGGTCCACCGCC
GCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGGGCGCTCGTGGTCCC
GAGAACCACTAGATGCAGTCATGTGACAGGCTCACCCTTGAGGCTGTCGG
CGAATCACGGGACCAGGGCACAAGCCCTGACAACCACAACTCGCTAAGCG
ACACCACCCCAGATCCCAGAGCAACTTCGATACGCCCAGCGACGACGACA
ACGACAACCAGCCCTTCAACGGAATCGCCAGGCCGCCGCTCCTTCCACGT
CCAGAAGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCA
AGTTCAACTGGAGCGAGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGC
AGAATGCGTCACCTCAAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCA
GGTCGGCACCCCCAAGGGCGCTCGTGGTCCCGAGAACCACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011332 |
| DBxref | InterPro:IPR011331 |
| DBxref | InterPro:IPR001569 |
| DBxref | PFAM:PF01907 |
| Product | Ribosomal protein L37e family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2344814..2345779 + |
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