You are here

Home

CAN33_25620-T1, CAN33_25620-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25620-T1
Unique NameCAN33_25620-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2398364..2399155+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25620-T1 ID=CAN33_25620-T1|Name=CAN33_25620-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=792bp|location=Sequence derived from alignment at NKJJ01000002.1:2398364..2399155+ (Aspergillus niger FDAARGOS_311)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCACTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACGGACGAGAAGACAGCTGAGGCGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTCAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGACCCGCGAGCA
GATCATAGCGGGTTCGGTACTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:2398364..2399155+

>CAN33_25620-T1 ID=CAN33_25620-T1|Name=CAN33_25620-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=792bp|location=Sequence derived from alignment at NKJJ01000002.1:2398364..2399155+ (Aspergillus niger FDAARGOS_311)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCACTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACGGACGAGAAGACAGCTGAGGCGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTCAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGACCCGCGAGCA
GATCATAGCGGGTTCGGTACTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009264deoxyribonucleotide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004139deoxyribose-phosphate aldolase activity
GO:0003824catalytic activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25620CAN33_25620Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25620-T1.exon1CAN33_25620-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25620-T1.cdsCAN33_25620-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25620-T1CAN33_25620-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR028581
DBxrefInterPro:IPR011343
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR002915
DBxrefPFAM:PF01791
Productdeoxyribose-phosphate aldolase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2398364..2399155 +
Powered by Drupal