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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2399447..2400868+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25625-T1 ID=CAN33_25625-T1|Name=CAN33_25625-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1422bp|location=Sequence derived from alignment at NKJJ01000002.1:2399447..2400868+ (Aspergillus niger FDAARGOS_311)
ATGCGCCGTCCCAACTATAAGGTATGTCGATGACAGCTTGTACCTCCTTG
TAATAGCAATCAGTATCTGACGTGAGAAAATGTGGTACATATAGAGACGC
AAGACTACCCATGAAGATAGTCCTCCTTCGCACCACAATGGCATAACCGG
TCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGCC
GATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAACCAAGTAA
ACCCCCCTTGACAAATGCTTCCCAGGGGCTGCTGGTGTATATGACCGCTA
ACAGATGCTGCGCAGCGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCCG
GTGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTG
TTTGACGATAATGAATATGGCGCCCACTGTGATTATTATGACCATAGAGA
CTCCTATAACTCACCCATTGCCAAAAATAGAGACCAAGTTGATGGCGATA
CATCCTCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCACTTCCTG
ACTCACGTTCTGTCGTATCTTGAGACTCCACCATATTTGCGCAAACATCT
CTTCCGCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTGG
ACATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGC
ATTGTCGTTTCTAGTTCAGCGCGGAAAAATAACCCGGCCAGCAAGATCAC
TCAGATGAGCAAAGATATCCTTTCCACCGTCGTAACAGCTCTACTAATAA
TGGCCCTGCCACAATAGTTGACACGGGTCTCTCACAGAAAATAGTTCTCC
CAAACATCCACCTCCCAGAACATGCCCGAGTCACTGTTCGATTTCCCCAG
CATGAGTTCCCCTATGCAGAACCCGTACACCCATCCACCCCTCGTGCCGA
AGCGGGTTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCACTCTT
CCGTTTTTACGGAATGTCCCTATGACGGTGGCTACGATCTCTCCTTCGGC
ACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCACA
ACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAA
TATCGCCAGACTTCCAGCATATTCTTGTCGTCTTCGGTGGTGTCGCTGGG
ATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATCCG
CCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCG
GACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGCTA
ACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCATA
CCGATGTCATCACGACGGTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2399447..2400868+ >CAN33_25625-T1 ID=CAN33_25625-T1|Name=CAN33_25625-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4896bp|location=Sequence derived from alignment at NKJJ01000002.1:2399447..2400868+ (Aspergillus niger FDAARGOS_311)
ATGCGCCGTCCCAACTATAAGAGACGCAAGACTACCCATGAAGATAGTCC
TCCTTCGCACCACAATGGCATAACCGGTCCCCTGTTCACCGAAAAGCCCT
CAGCCGTCTTCACCCCCAAGGGTGGCCGATCGCATACACTCAGCGTTGCC
ATTCCGGGCAGCATCATAACCAACGCTCATTCCGTCGAGCAAAAGACCTT
CCTAGCCGGTGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAG
TTGTGGTGTTTGACGATAATGAATATGGCGCCCACTGTGATTATTATGAC
CATAGAGACTCCTATAACTCACCCATTGCCAAAAATAGAGACCAAGTTGA
TGGCGATACATCCTCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGC
ACTTCCTGACTCACGTTCTGTCGTATCTTGAGACTCCACCATATTTGCGC
AAACATCTCTTCCGCATACATCCCAATCTTCGCACCGCTGGATTGCTGCC
CAGCTTGGACATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCC
GTGAAGGCATTGTCGTTTCTAGTTCAGCGCGGAAAAATAACCCGGCCAGC
AAGATCACTCAGATGAGCAAAGATATCCTTTCCACCGTCAAAATAGTTCT
CCCAAACATCCACCTCCCAGAACATGCCCGAGTCACTGTTCGATTTCCCC
AGCATGAGTTCCCCTATGCAGAACCCGTACACCCATCCACCCCTCGTGCC
GAAGCGGGTTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCACTC
TTCCGTTTTTACGGAATGTCCCTATGACGGTGGCTACGATCTCTCCTTCG
GCACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCA
CAACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCA
AATATCGCCAGACTTCCAGCATATTCTTGTCGTCTTCGGTGGTGTCGCTG
GGATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATC
CGCCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACC
CGGACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGC
TAACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCA
TACCGATGTCATCACGACGGTTAGATGCGCCGTCCCAACTATAAGAGACG
CAAGACTACCCATGAAGATAGTCCTCCTTCGCACCACAATGGCATAACCG
GTCCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGC
CGATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAACCAACGC
TCATTCCGTCGAGCAAAAGACCTTCCTAGCCGGTGTAATCGCACGCGCCC
TTGCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATAT
GGCGCCCACTGTGATTATTATGACCATAGAGACTCCTATAACTCACCCAT
TGCCAAAAATAGAGACCAAGTTGATGGCGATACATCCTCTCCAAAAGCCT
ATACCGCGAATTCAGACCCCTCGCACTTCCTGACTCACGTTCTGTCGTAT
CTTGAGACTCCACCATATTTGCGCAAACATCTCTTCCGCATACATCCCAA
TCTTCGCACCGCTGGATTGCTGCCCAGCTTGGACATGCCTCATCACTTGC
GTGCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGTCGTTTCTAGTTCA
GCGCGGAAAAATAACCCGGCCAGCAAGATCACTCAGATGAGCAAAGATAT
CCTTTCCACCGTCAAAATAGTTCTCCCAAACATCCACCTCCCAGAACATG
CCCGAGTCACTGTTCGATTTCCCCAGCATGAGTTCCCCTATGCAGAACCC
GTACACCCATCCACCCCTCGTGCCGAAGCGGGTTATTACTGGGGCTACTA
TGTGCGACGATGTCGATCTCACTCTTCCGTTTTTACGGAATGTCCCTATG
ACGGTGGCTACGATCTCTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTC
TCCGCAGTGCTAGAGGAGAAGCCACAACAAGCACATGATCGCTACAAGCA
AGGCCACTCCTTTTGTCGGGATCAAATATCGCCAGACTTCCAGCATATTC
TTGTCGTCTTCGGTGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGAT
CCTCAACTCCGTGACATGGCCATCCGCCCATCCGATGCTGGCAAGCTCTT
CGACTACTGGGTAAATTTCCTACCCGGACAGGGAAGCAGAACCATCCGCA
CTGAAGAAGCCGTTTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGAT
GGCACCCATCGGTTGAGAAAGGCATACCGATGTCATCACGACGGTTAGAT
GCGCCGTCCCAACTATAAGAGACGCAAGACTACCCATGAAGATAGTCCTC
CTTCGCACCACAATGGCATAACCGGTCCCCTGTTCACCGAAAAGCCCTCA
GCCGTCTTCACCCCCAAGGGTGGCCGATCGCATACACTCAGCGTTGCCAT
TCCGGGCAGCATCATAACCAACGCTCATTCCGTCGAGCAAAAGACCTTCC
TAGCCGGTGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTT
GTGGTGTTTGACGATAATGAATATGGCGCCCACTGTGATTATTATGACCA
TAGAGACTCCTATAACTCACCCATTGCCAAAAATAGAGACCAAGTTGATG
GCGATACATCCTCTCCAAAAGCCTATACCGCGAATTCAGACCCCTCGCAC
TTCCTGACTCACGTTCTGTCGTATCTTGAGACTCCACCATATTTGCGCAA
ACATCTCTTCCGCATACATCCCAATCTTCGCACCGCTGGATTGCTGCCCA
GCTTGGACATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGT
GAAGGCATTGTCGTTTCTAGTTCAGCGCGGAAAAATAACCCGGCCAGCAA
GATCACTCAGATGAGCAAAGATATCCTTTCCACCGTCAAAATAGTTCTCC
CAAACATCCACCTCCCAGAACATGCCCGAGTCACTGTTCGATTTCCCCAG
CATGAGTTCCCCTATGCAGAACCCGTACACCCATCCACCCCTCGTGCCGA
AGCGGGTTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCACTCTT
CCGTTTTTACGGAATGTCCCTATGACGGTGGCTACGATCTCTCCTTCGGC
ACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCACA
ACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAA
TATCGCCAGACTTCCAGCATATTCTTGTCGTCTTCGGTGGTGTCGCTGGG
ATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATCCG
CCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCG
GACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGCTA
ACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCATA
CCGATGTCATCACGACGGTTAGATGCGCCGTCCCAACTATAAGAGACGCA
AGACTACCCATGAAGATAGTCCTCCTTCGCACCACAATGGCATAACCGGT
CCCCTGTTCACCGAAAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCG
ATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAACCAACGCTC
ATTCCGTCGAGCAAAAGACCTTCCTAGCCGGTGTAATCGCACGCGCCCTT
GCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATATGG
CGCCCACTGTGATTATTATGACCATAGAGACTCCTATAACTCACCCATTG
CCAAAAATAGAGACCAAGTTGATGGCGATACATCCTCTCCAAAAGCCTAT
ACCGCGAATTCAGACCCCTCGCACTTCCTGACTCACGTTCTGTCGTATCT
TGAGACTCCACCATATTTGCGCAAACATCTCTTCCGCATACATCCCAATC
TTCGCACCGCTGGATTGCTGCCCAGCTTGGACATGCCTCATCACTTGCGT
GCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGTCGTTTCTAGTTCAGC
GCGGAAAAATAACCCGGCCAGCAAGATCACTCAGATGAGCAAAGATATCC
TTTCCACCGTCAAAATAGTTCTCCCAAACATCCACCTCCCAGAACATGCC
CGAGTCACTGTTCGATTTCCCCAGCATGAGTTCCCCTATGCAGAACCCGT
ACACCCATCCACCCCTCGTGCCGAAGCGGGTTATTACTGGGGCTACTATG
TGCGACGATGTCGATCTCACTCTTCCGTTTTTACGGAATGTCCCTATGAC
GGTGGCTACGATCTCTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTC
CGCAGTGCTAGAGGAGAAGCCACAACAAGCACATGATCGCTACAAGCAAG
GCCACTCCTTTTGTCGGGATCAAATATCGCCAGACTTCCAGCATATTCTT
GTCGTCTTCGGTGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCC
TCAACTCCGTGACATGGCCATCCGCCCATCCGATGCTGGCAAGCTCTTCG
ACTACTGGGTAAATTTCCTACCCGGACAGGGAAGCAGAACCATCCGCACT
GAAGAAGCCGTTTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGG
CACCCATCGGTTGAGAAAGGCATACCGATGTCATCACGACGGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029028 |
| DBxref | InterPro:IPR003750 |
| DBxref | InterPro:IPR029026 |
| DBxref | PFAM:PF02598 |
| Product | putative RNA methyltransferase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2399447..2400868 + |
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