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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2450117..2452330- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25710-T1 ID=CAN33_25710-T1|Name=CAN33_25710-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2214bp|location=Sequence derived from alignment at NKJJ01000002.1:2450117..2452330- (Aspergillus niger FDAARGOS_311)
ATGGCCGAGTATGTATATTCACGCACCTCCAATGCAGTTAGCCTATGCTG
TGTTTGCTTGCTAATATTGGTGGCAGTTTTATTGCTTTCCATACTTATTA
CTCTCGCCACAACTTCCTATCCCCGTCTACGATGCTGCCACGCCCCACCA
GCCACAAACGGTCGAATTCCTCCGAGAACAATTCTCTCTCCCCCGACAAG
ACCGTCACGAAAGCCAGATCCACCAATGATTTGTCTGGAACTGCCACTGC
GAAACCGACACCGGGCGTCCGCTCGTCCAGTGTCGGCAATTTCCAGGAAA
CCAGCTTTAGCACTCTGAAAGACCCCAGACTTGCGAGCCACTCGGAAGAC
TCGGAGACGCCAGAGTCAACTCAGTCGCATCATCCAGACCTGAGCAATGA
GGTTGCAGCGTTGAGCGTCAAGTTGGTCCAGGCGATCAACAATCAGACAA
CGCTCGATGACAACCTAGTTGCCACTCGTCAGGAATTGGAGCAGGCACAA
GCCAAGATCCGAGTCCTTGAGTTGGAAAACGAAAAGTACCAGCGAGACAT
TGATCAGGAAGTCTTGATCAAGAAGTCCGACGTGGACTACGAGATGTTGC
GCTTACAAGCTGCCTTGGCTGAAGAGAAGGCTCAGCGCGCCCTTGTGGAA
AAGGAGAAGAAGGGCATTGAACAAGAATTAGAAACACTAACTGCCGCGCT
TTTTGAAGAGGCCAACAAGGTAAGCTCCCTCGGCGTTTGTACGGTTGAGT
CGATCAATTGACTTATTACCTTTTGAACAGATGGTCGCAGCGGCCAAGCT
TGAGCGTGAGGCCGTAGAAAAGAAAAACGAGCAGCTGCGCTCGCAAGTCA
AAGATACCGAAGCACTGCTTGCATCGCATCAAGAACAATTGGCCGAGTTA
AAGTCCGTCTTGCAGGGACTCAACATCGCCAAGGAGGATAGTGAGACTCG
CACAATCATCTCGACAGCTCCGTCATCACCAACTATGCCGCGGCATCCTT
TGCACATCAGCAAGAATTCTGATATCCCCGACATACCAGAGGAGATCCCA
ACTCTAGAAGAGCTCACTCCAGGACCGTCCACCAGTTTCCCCCATCTGAT
CAAGCCGGTCTGTCGAACCGATATTCAAGCTTACGAGGATTTTCGGGAAC
TCTTCACTACATCTCGAGCTTCCAAGCCTGCCAGTCGGGCCACAAGTGGG
TCTTACACTGGCTTGAACGTCATGAGCTTGGCTAGTGGGTTCGGTTCAGC
GTCGTCATCTCCCGCCAAATCTCAAACACATTCTCCTAATGGAAGCGTGT
CTTCCCCACAGCCCGTGACTTCCCATATTCCTCTCAAGGAGACCCGCTTC
TACAAGCGCGTGCTTTCGGAAGACATCGAACCGACCCTCCGGCTTGATGC
TGCGCCCGGGATCTCATGGCTAACGCGGCGCTCAGTATTGAGCGGGATCT
GCGATGGAACTCTCCTGGTCGAGCCCATGCCGCCTTCAGCAAAGAAATAT
GAGTTTCCTTGTTCAATGTGTGGCGAGCGCCGAAACGGTCCCACCAACGA
GAGGACCCATCGGTTCCGGACGTCCGATAGCGAGACCGCCCAGCGATATC
CGCTGTGTGTACTGTGTTTAGAGAGAGTCCGTTCCAGCTGCGAGTTCACT
GGATACCTCCGTCTCATCCTTGACGGCCATGTCCGCATTGGCGATGCCGA
AGAGGAGAAGGATGCATGGGATGAAACTATCCGGCTAAGAGAGAGAATGT
TCTGGTCACGCATCGGAGGTGGAATTATCCCTTTGTTTGCTCACGCCAAT
GGCTTCCAAGGCAATATCCCTACATCTACTGAAAATGTTGAGGCTCCGGT
TGCCGATGGTCGTGATGATTGCCAGCGGTCAATCATCTCCACCGTCCCCG
AGGATATCACCATAGAAACAAAGAACCTAGACGAGATTGACGAGCACAAC
CATGACGAGGGTTCCGTGGCTGACGATCCGTTTGTGTCTGCTCCCTCCGA
GTCAGAATCTACAGCCAGCAGCGCGGCGGTCTCTCCCACGGATGCTAGCG
CACCCGTCGTGAAGACAGACCTCGTTGATGACATGCACGAACAGCCTGAT
GTGCAGGTTGTCGTTCCTGAACCTACACATGATGAAGCTGATAGCGTTAA
GCTCCCAACTCAAGTTGAGGAGACGCCAATCAACCACGACACCACAAAAC
ATGGTGATAACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2450117..2452330- >CAN33_25710-T1 ID=CAN33_25710-T1|Name=CAN33_25710-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6255bp|location=Sequence derived from alignment at NKJJ01000002.1:2450117..2452330- (Aspergillus niger FDAARGOS_311)
ATGGTCGCAGCGGCCAAGCTTGAGCGTGAGGCCGTAGAAAAGAAAAACGA
GCAGCTGCGCTCGCAAGTCAAAGATACCGAAGCACTGCTTGCATCGCATC
AAGAACAATTGGCCGAGTTAAAGTCCGTCTTGCAGGGACTCAACATCGCC
AAGGAGGATAGTGAGACTCGCACAATCATCTCGACAGCTCCGTCATCACC
AACTATGCCGCGGCATCCTTTGCACATCAGCAAGAATTCTGATATCCCCG
ACATACCAGAGGAGATCCCAACTCTAGAAGAGCTCACTCCAGGACCGTCC
ACCAGTTTCCCCCATCTGATCAAGCCGGTCTGTCGAACCGATATTCAAGC
TTACGAGGATTTTCGGGAACTCTTCACTACATCTCGAGCTTCCAAGCCTG
CCAGTCGGGCCACAAGTGGGTCTTACACTGGCTTGAACGTCATGAGCTTG
GCTAGTGGGTTCGGTTCAGCGTCGTCATCTCCCGCCAAATCTCAAACACA
TTCTCCTAATGGAAGCGTGTCTTCCCCACAGCCCGTGACTTCCCATATTC
CTCTCAAGGAGACCCGCTTCTACAAGCGCGTGCTTTCGGAAGACATCGAA
CCGACCCTCCGGCTTGATGCTGCGCCCGGGATCTCATGGCTAACGCGGCG
CTCAGTATTGAGCGGGATCTGCGATGGAACTCTCCTGGTCGAGCCCATGC
CGCCTTCAGCAAAGAAATATGAGTTTCCTTGTTCAATGTGTGGCGAGCGC
CGAAACGGTCCCACCAACGAGAGGACCCATCGGTTCCGGACGTCCGATAG
CGAGACCGCCCAGCGATATCCGCTGTGTGTACTGTGTTTAGAGAGAGTCC
GTTCCAGCTGCGAGTTCACTGGATACCTCCGTCTCATCCTTGACGGCCAT
GTCCGCATTGGCGATGCCGAAGAGGAGAAGGATGCATGGGATGAAACTAT
CCGGCTAAGAGAGAGAATGTTCTGGTCACGCATCGGAGGTGGAATTATCC
CTTTGTTTGCTCACGCCAATGGCTTCCAAGGCAATATCCCTACATCTACT
GAAAATGTTGAGGCTCCGGTTGCCGATGGTCGTGATGATTGCCAGCGGTC
AATCATCTCCACCGTCCCCGAGGATATCACCATAGAAACAAAGAACCTAG
ACGAGATTGACGAGCACAACCATGACGAGGGTTCCGTGGCTGACGATCCG
TTTGTGTCTGCTCCCTCCGAGTCAGAATCTACAGCCAGCAGCGCGGCGGT
CTCTCCCACGGATGCTAGCGCACCCGTCGTGAAGACAGACCTCGTTGATG
ACATGCACGAACAGCCTGATGTGCAGGTTGTCGTTCCTGAACCTACACAT
GATGAAGCTGATAGCGTTAAGCTCCCAACTCAAGTTGAGGAGACGCCAAT
CAACCACGACACCACAAAACATGGTGATAACTGATTTTATTGCTTTCCAT
ACTTATTACTCTCGCCACAACTTCCTATCCCCGTCTACGATGCTGCCACG
CCCCACCAGCCACAAACGGTCGAATTCCTCCGAGAACAATTCTCTCTCCC
CCGACAAGACCGTCACGAAAGCCAGATCCACCAATGATTTGTCTGGAACT
GCCACTGCGAAACCGACACCGGGCGTCCGCTCGTCCAGTGTCGGCAATTT
CCAGGAAACCAGCTTTAGCACTCTGAAAGACCCCAGACTTGCGAGCCACT
CGGAAGACTCGGAGACGCCAGAGTCAACTCAGTCGCATCATCCAGACCTG
AGCAATGAGGTTGCAGCGTTGAGCGTCAAGTTGGTCCAGGCGATCAACAA
TCAGACAACGCTCGATGACAACCTAGTTGCCACTCGTCAGGAATTGGAGC
AGGCACAAGCCAAGATCCGAGTCCTTGAGTTGGAAAACGAAAAGTACCAG
CGAGACATTGATCAGGAAGTCTTGATCAAGAAGTCCGACGTGGACTACGA
GATGTTGCGCTTACAAGCTGCCTTGGCTGAAGAGAAGGCTCAGCGCGCCC
TTGTGGAAAAGGAGAAGAAGGGCATTGAACAAGAATTAGAAACACTAACT
GCCGCGCTTTTTGAAGAGGCCAACAAGATGGCCGAATGGTCGCAGCGGCC
AAGCTTGAGCGTGAGGCCGTAGAAAAGAAAAACGAGCAGCTGCGCTCGCA
AGTCAAAGATACCGAAGCACTGCTTGCATCGCATCAAGAACAATTGGCCG
AGTTAAAGTCCGTCTTGCAGGGACTCAACATCGCCAAGGAGGATAGTGAG
ACTCGCACAATCATCTCGACAGCTCCGTCATCACCAACTATGCCGCGGCA
TCCTTTGCACATCAGCAAGAATTCTGATATCCCCGACATACCAGAGGAGA
TCCCAACTCTAGAAGAGCTCACTCCAGGACCGTCCACCAGTTTCCCCCAT
CTGATCAAGCCGGTCTGTCGAACCGATATTCAAGCTTACGAGGATTTTCG
GGAACTCTTCACTACATCTCGAGCTTCCAAGCCTGCCAGTCGGGCCACAA
GTGGGTCTTACACTGGCTTGAACGTCATGAGCTTGGCTAGTGGGTTCGGT
TCAGCGTCGTCATCTCCCGCCAAATCTCAAACACATTCTCCTAATGGAAG
CGTGTCTTCCCCACAGCCCGTGACTTCCCATATTCCTCTCAAGGAGACCC
GCTTCTACAAGCGCGTGCTTTCGGAAGACATCGAACCGACCCTCCGGCTT
GATGCTGCGCCCGGGATCTCATGGCTAACGCGGCGCTCAGTATTGAGCGG
GATCTGCGATGGAACTCTCCTGGTCGAGCCCATGCCGCCTTCAGCAAAGA
AATATGAGTTTCCTTGTTCAATGTGTGGCGAGCGCCGAAACGGTCCCACC
AACGAGAGGACCCATCGGTTCCGGACGTCCGATAGCGAGACCGCCCAGCG
ATATCCGCTGTGTGTACTGTGTTTAGAGAGAGTCCGTTCCAGCTGCGAGT
TCACTGGATACCTCCGTCTCATCCTTGACGGCCATGTCCGCATTGGCGAT
GCCGAAGAGGAGAAGGATGCATGGGATGAAACTATCCGGCTAAGAGAGAG
AATGTTCTGGTCACGCATCGGAGGTGGAATTATCCCTTTGTTTGCTCACG
CCAATGGCTTCCAAGGCAATATCCCTACATCTACTGAAAATGTTGAGGCT
CCGGTTGCCGATGGTCGTGATGATTGCCAGCGGTCAATCATCTCCACCGT
CCCCGAGGATATCACCATAGAAACAAAGAACCTAGACGAGATTGACGAGC
ACAACCATGACGAGGGTTCCGTGGCTGACGATCCGTTTGTGTCTGCTCCC
TCCGAGTCAGAATCTACAGCCAGCAGCGCGGCGGTCTCTCCCACGGATGC
TAGCGCACCCGTCGTGAAGACAGACCTCGTTGATGACATGCACGAACAGC
CTGATGTGCAGGTTGTCGTTCCTGAACCTACACATGATGAAGCTGATAGC
GTTAAGCTCCCAACTCAAGTTGAGGAGACGCCAATCAACCACGACACCAC
AAAACATGGTGATAACTGATTTTATTGCTTTCCATACTTATTACTCTCGC
CACAACTTCCTATCCCCGTCTACGATGCTGCCACGCCCCACCAGCCACAA
ACGGTCGAATTCCTCCGAGAACAATTCTCTCTCCCCCGACAAGACCGTCA
CGAAAGCCAGATCCACCAATGATTTGTCTGGAACTGCCACTGCGAAACCG
ACACCGGGCGTCCGCTCGTCCAGTGTCGGCAATTTCCAGGAAACCAGCTT
TAGCACTCTGAAAGACCCCAGACTTGCGAGCCACTCGGAAGACTCGGAGA
CGCCAGAGTCAACTCAGTCGCATCATCCAGACCTGAGCAATGAGGTTGCA
GCGTTGAGCGTCAAGTTGGTCCAGGCGATCAACAATCAGACAACGCTCGA
TGACAACCTAGTTGCCACTCGTCAGGAATTGGAGCAGGCACAAGCCAAGA
TCCGAGTCCTTGAGTTGGAAAACGAAAAGTACCAGCGAGACATTGATCAG
GAAGTCTTGATCAAGAAGTCCGACGTGGACTACGAGATGTTGCGCTTACA
AGCTGCCTTGGCTGAAGAGAAGGCTCAGCGCGCCCTTGTGGAAAAGGAGA
AGAAGGGCATTGAACAAGAATTAGAAACACTAACTGCCGCGCTTTTTGAA
GAGGCCAACAAGATGGCCGAATGGTCGCAGCGGCCAAGCTTGAGCGTGAG
GCCGTAGAAAAGAAAAACGAGCAGCTGCGCTCGCAAGTCAAAGATACCGA
AGCACTGCTTGCATCGCATCAAGAACAATTGGCCGAGTTAAAGTCCGTCT
TGCAGGGACTCAACATCGCCAAGGAGGATAGTGAGACTCGCACAATCATC
TCGACAGCTCCGTCATCACCAACTATGCCGCGGCATCCTTTGCACATCAG
CAAGAATTCTGATATCCCCGACATACCAGAGGAGATCCCAACTCTAGAAG
AGCTCACTCCAGGACCGTCCACCAGTTTCCCCCATCTGATCAAGCCGGTC
TGTCGAACCGATATTCAAGCTTACGAGGATTTTCGGGAACTCTTCACTAC
ATCTCGAGCTTCCAAGCCTGCCAGTCGGGCCACAAGTGGGTCTTACACTG
GCTTGAACGTCATGAGCTTGGCTAGTGGGTTCGGTTCAGCGTCGTCATCT
CCCGCCAAATCTCAAACACATTCTCCTAATGGAAGCGTGTCTTCCCCACA
GCCCGTGACTTCCCATATTCCTCTCAAGGAGACCCGCTTCTACAAGCGCG
TGCTTTCGGAAGACATCGAACCGACCCTCCGGCTTGATGCTGCGCCCGGG
ATCTCATGGCTAACGCGGCGCTCAGTATTGAGCGGGATCTGCGATGGAAC
TCTCCTGGTCGAGCCCATGCCGCCTTCAGCAAAGAAATATGAGTTTCCTT
GTTCAATGTGTGGCGAGCGCCGAAACGGTCCCACCAACGAGAGGACCCAT
CGGTTCCGGACGTCCGATAGCGAGACCGCCCAGCGATATCCGCTGTGTGT
ACTGTGTTTAGAGAGAGTCCGTTCCAGCTGCGAGTTCACTGGATACCTCC
GTCTCATCCTTGACGGCCATGTCCGCATTGGCGATGCCGAAGAGGAGAAG
GATGCATGGGATGAAACTATCCGGCTAAGAGAGAGAATGTTCTGGTCACG
CATCGGAGGTGGAATTATCCCTTTGTTTGCTCACGCCAATGGCTTCCAAG
GCAATATCCCTACATCTACTGAAAATGTTGAGGCTCCGGTTGCCGATGGT
CGTGATGATTGCCAGCGGTCAATCATCTCCACCGTCCCCGAGGATATCAC
CATAGAAACAAAGAACCTAGACGAGATTGACGAGCACAACCATGACGAGG
GTTCCGTGGCTGACGATCCGTTTGTGTCTGCTCCCTCCGAGTCAGAATCT
ACAGCCAGCAGCGCGGCGGTCTCTCCCACGGATGCTAGCGCACCCGTCGT
GAAGACAGACCTCGTTGATGACATGCACGAACAGCCTGATGTGCAGGTTG
TCGTTCCTGAACCTACACATGATGAAGCTGATAGCGTTAAGCTCCCAACT
CAAGTTGAGGAGACGCCAATCAACCACGACACCACAAAACATGGTGATAA
CTGATTTTATTGCTTTCCATACTTATTACTCTCGCCACAACTTCCTATCC
CCGTCTACGATGCTGCCACGCCCCACCAGCCACAAACGGTCGAATTCCTC
CGAGAACAATTCTCTCTCCCCCGACAAGACCGTCACGAAAGCCAGATCCA
CCAATGATTTGTCTGGAACTGCCACTGCGAAACCGACACCGGGCGTCCGC
TCGTCCAGTGTCGGCAATTTCCAGGAAACCAGCTTTAGCACTCTGAAAGA
CCCCAGACTTGCGAGCCACTCGGAAGACTCGGAGACGCCAGAGTCAACTC
AGTCGCATCATCCAGACCTGAGCAATGAGGTTGCAGCGTTGAGCGTCAAG
TTGGTCCAGGCGATCAACAATCAGACAACGCTCGATGACAACCTAGTTGC
CACTCGTCAGGAATTGGAGCAGGCACAAGCCAAGATCCGAGTCCTTGAGT
TGGAAAACGAAAAGTACCAGCGAGACATTGATCAGGAAGTCTTGATCAAG
AAGTCCGACGTGGACTACGAGATGTTGCGCTTACAAGCTGCCTTGGCTGA
AGAGAAGGCTCAGCGCGCCCTTGTGGAAAAGGAGAAGAAGGGCATTGAAC
AAGAATTAGAAACACTAACTGCCGCGCTTTTTGAAGAGGCCAACAAGATG
GCCGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| DBxref | InterPro:IPR009449 |
| DBxref | PFAM:PF06428 |
| Product | GDP/GTP exchange factor Sec2p family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2450117..2452330 - |
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