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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2454299..2454998+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25715-T1 ID=CAN33_25715-T1|Name=CAN33_25715-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=700bp|location=Sequence derived from alignment at NKJJ01000002.1:2454299..2454998+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACGCAGAGCTTGAAGAGGTCAGTATGAACCTTCCCACCTACGT
TCAACTTTCCCAGTCTTCCATGGACATTCATGCTTGTTGAATCTCCTTCG
GGTCCACACCTTCGACACTTCTCGTATCAAATGCTTAAATGTGGTATAGA
TCAGACGGGCCCGTCTTGCCCAGCTTCAGCAACAGGGTGGTGGCGCACGT
GGTGGCCCTTCGGACGGCAACCAGGAGGAACAGAGAAGGTATGCTTCCCA
GATGTTGTTTTTGCTTCTGCGCTTGTAAATCCTTACTGACTTGTCGCTCC
ACTTTAGGCAAGCTGAAGGTATGCGCAATCTCATAACCCATTAGAATAGG
ACATGCTGGAGGAATCTCTCTGCCTACATCGCTCTCTCTCAAACAATTTG
CTTATTCTTTCACAAATAGCCGACCGCCGCGCCACTATCCTGAACCAGAT
CCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGCCTTGTTAAGG
AATCCCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCTCGCCCAGTCC
GGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGCAGCTGCTGAA
CGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCACAAAATTGTAA
TCAACCGACGCGGCGGCTGGGATGATGATGACGACCTGTTGGATCTGTGA
back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2454299..2454998+ >CAN33_25715-T1 ID=CAN33_25715-T1|Name=CAN33_25715-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1620bp|location=Sequence derived from alignment at NKJJ01000002.1:2454299..2454998+ (Aspergillus niger FDAARGOS_311)
ATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGCCCGTCTTGCCCAGCT
TCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTTCGGACGGCAACCAGG
AGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGCGCCACTATCCTGAAC
CAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGCCTTGT
TAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCTCGCCC
AGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGCAGCTG
CTGAACGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCACAAAAT
TGTAATCAACCGACGCGGCGGCTGGGATGATGATGACGACCTGTTGGATC
TGTGAATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGCCCGTCTTGCC
CAGCTTCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTTCGGACGGCAA
CCAGGAGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGCGCCACTATCC
TGAACCAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGC
CTTGTTAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCT
CGCCCAGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGC
AGCTGCTGAACGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCAC
AAAATTGTAATCAACCGACGCGGCGGCTGGGATGATGATGACGACCTGTT
GGATCTGTGAATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGCCCGTC
TTGCCCAGCTTCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTTCGGAC
GGCAACCAGGAGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGCGCCAC
TATCCTGAACCAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCA
TCCGCCTTGTTAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTCTCATC
ATGCTCGCCCAGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCT
CAAGCAGCTGCTGAACGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGG
AGCACAAAATTGTAATCAACCGACGCGGCGGCTGGGATGATGATGACGAC
CTGTTGGATCTGTGAATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGC
CCGTCTTGCCCAGCTTCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTT
CGGACGGCAACCAGGAGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGC
GCCACTATCCTGAACCAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGG
TCGCATCCGCCTTGTTAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTC
TCATCATGCTCGCCCAGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGAC
CAGCTCAAGCAGCTGCTGAACGCCATGGCCGAGAACCAGCGCAAGGATGA
GGAGGAGCACAAAATTGTAATCAACCGACGCGGCGGCTGGGATGATGATG
ACGACCTGTTGGATCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265HEP |
| DBxref | InterPro:IPR002836 |
| DBxref | InterPro:IPR036883 |
| DBxref | PFAM:PF01984 |
| Product | Double-stranded DNA-binding domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2454299..2454998 + |
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