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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2475460..2476526+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_25770-T1 ID=CAN33_25770-T1|Name=CAN33_25770-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1067bp|location=Sequence derived from alignment at NKJJ01000002.1:2475460..2476526+ (Aspergillus niger FDAARGOS_311)
ATGGGCGACAAGAAGCGCAAGCTCGCCGAGGAGGCCACCTCCCCCGAAGT
GAAGAAGGCCAAGCGTGAAGACAAGAAGGAGAAGAAGGAGAAGAAGGAGC
GCAAGGCAAAGGAAGTTGTCGAGGAGGTTCCTGTTGTTGAGAAGGAGGAG
AAGAAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAGAAGAA
GGACAAGAAGGAAAAGAAGGAGAAGAAAGAGAAGAAAGACAAGAAGGAAA
AGAAGTCCGAGCCCGAGCCCGAAGCCATGGACGTCGACGAGGCCCCCGCC
GAGAAAGAGAACCAGGAGCCCGAGGCCGAGCCGGAGGTGACCAAGGAAGA
GAAGAAGAAGGAAAAGAAGGAGAAGAAGGATAAGAAGGACAAGAAATCCA
AGAAGGAGAAGAAGCAGGGAGAAACGAATACCGAGGCTCAGCCTACCAGC
GAACAGACCGAAGAGCCTGCTGAGCAGGAGGAGCAGCAGAATAAGAAGAA
TGTGCGGTTTATCTGCTTTGTCGGTACGTATCCAACTCTTTCCCGATGCC
CCATATAGACCCGACCAGATACTAATATAAATTCGTATAGGAAACCTCCC
CTACTCCGCCGACAAAGAGTCCCTCACCAAGCACTTCGAGAAGATCGCCC
CCGTTTCCGTCCGCGTAGCCACCCAGGTCGACAAGCCGACCAAGTGCCGC
GGCTTCGGCTTCATCGAGTTCGACAACTACGACCGCATGAAGACCTGTCT
CAAGCTGTACCATCACTCCATGTTCAACGATGGAAAGTACCCGCCGCGAC
GGATCAATGTGGAGCTGACGTGAGTTATACATACCGACTATTATATTCAG
CAGCAAACTGACATATATGCTATGTAGTGCCGGCGGTGGCGGTAACTCCA
AGGACCGGAAAGACAAGATCGAGGCCAAGAACAAGAAGCTTTTCGAAGAG
AGACAGCGCAACGCCAAGGAAATTCAGAAGGAGAAGAAGCGGTTAGAGCA
GGTCGAGGAGACGGGTGTGGATGACTATGCTCATATTCATCCTAGTCGGA
GGCCCCGGATGGCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2475460..2476526+ >CAN33_25770-T1 ID=CAN33_25770-T1|Name=CAN33_25770-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2826bp|location=Sequence derived from alignment at NKJJ01000002.1:2475460..2476526+ (Aspergillus niger FDAARGOS_311)
ATGGGCGACAAGAAGCGCAAGCTCGCCGAGGAGGCCACCTCCCCCGAAGT
GAAGAAGGCCAAGCGTGAAGACAAGAAGGAGAAGAAGGAGAAGAAGGAGC
GCAAGGCAAAGGAAGTTGTCGAGGAGGTTCCTGTTGTTGAGAAGGAGGAG
AAGAAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAGAAGAA
GGACAAGAAGGAAAAGAAGGAGAAGAAAGAGAAGAAAGACAAGAAGGAAA
AGAAGTCCGAGCCCGAGCCCGAAGCCATGGACGTCGACGAGGCCCCCGCC
GAGAAAGAGAACCAGGAGCCCGAGGCCGAGCCGGAGGTGACCAAGGAAGA
GAAGAAGAAGGAAAAGAAGGAGAAGAAGGATAAGAAGGACAAGAAATCCA
AGAAGGAGAAGAAGCAGGGAGAAACGAATACCGAGGCTCAGCCTACCAGC
GAACAGACCGAAGAGCCTGCTGAGCAGGAGGAGCAGCAGAATAAGAAGAA
TGTGCGGTTTATCTGCTTTGTCGGAAACCTCCCCTACTCCGCCGACAAAG
AGTCCCTCACCAAGCACTTCGAGAAGATCGCCCCCGTTTCCGTCCGCGTA
GCCACCCAGGTCGACAAGCCGACCAAGTGCCGCGGCTTCGGCTTCATCGA
GTTCGACAACTACGACCGCATGAAGACCTGTCTCAAGCTGTACCATCACT
CCATGTTCAACGATGGAAAGTACCCGCCGCGACGGATCAATGTGGAGCTG
ACTGCCGGCGGTGGCGGTAACTCCAAGGACCGGAAAGACAAGATCGAGGC
CAAGAACAAGAAGCTTTTCGAAGAGAGACAGCGCAACGCCAAGGAAATTC
AGAAGGAGAAGAAGCGGTTAGAGCAGGTCGAGGAGACGGGTGTGGATGAC
TATGCTCATATTCATCCTAGTCGGAGGCCCCGGATGGCTTAGATGGGCGA
CAAGAAGCGCAAGCTCGCCGAGGAGGCCACCTCCCCCGAAGTGAAGAAGG
CCAAGCGTGAAGACAAGAAGGAGAAGAAGGAGAAGAAGGAGCGCAAGGCA
AAGGAAGTTGTCGAGGAGGTTCCTGTTGTTGAGAAGGAGGAGAAGAAGGA
AAAGAAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAGAAGAAGGACAAGA
AGGAAAAGAAGGAGAAGAAAGAGAAGAAAGACAAGAAGGAAAAGAAGTCC
GAGCCCGAGCCCGAAGCCATGGACGTCGACGAGGCCCCCGCCGAGAAAGA
GAACCAGGAGCCCGAGGCCGAGCCGGAGGTGACCAAGGAAGAGAAGAAGA
AGGAAAAGAAGGAGAAGAAGGATAAGAAGGACAAGAAATCCAAGAAGGAG
AAGAAGCAGGGAGAAACGAATACCGAGGCTCAGCCTACCAGCGAACAGAC
CGAAGAGCCTGCTGAGCAGGAGGAGCAGCAGAATAAGAAGAATGTGCGGT
TTATCTGCTTTGTCGGAAACCTCCCCTACTCCGCCGACAAAGAGTCCCTC
ACCAAGCACTTCGAGAAGATCGCCCCCGTTTCCGTCCGCGTAGCCACCCA
GGTCGACAAGCCGACCAAGTGCCGCGGCTTCGGCTTCATCGAGTTCGACA
ACTACGACCGCATGAAGACCTGTCTCAAGCTGTACCATCACTCCATGTTC
AACGATGGAAAGTACCCGCCGCGACGGATCAATGTGGAGCTGACTGCCGG
CGGTGGCGGTAACTCCAAGGACCGGAAAGACAAGATCGAGGCCAAGAACA
AGAAGCTTTTCGAAGAGAGACAGCGCAACGCCAAGGAAATTCAGAAGGAG
AAGAAGCGGTTAGAGCAGGTCGAGGAGACGGGTGTGGATGACTATGCTCA
TATTCATCCTAGTCGGAGGCCCCGGATGGCTTAGATGGGCGACAAGAAGC
GCAAGCTCGCCGAGGAGGCCACCTCCCCCGAAGTGAAGAAGGCCAAGCGT
GAAGACAAGAAGGAGAAGAAGGAGAAGAAGGAGCGCAAGGCAAAGGAAGT
TGTCGAGGAGGTTCCTGTTGTTGAGAAGGAGGAGAAGAAGGAAAAGAAGG
AAAAGAAGGAAAAGAAGGAAAAGAAGGAGAAGAAGGACAAGAAGGAAAAG
AAGGAGAAGAAAGAGAAGAAAGACAAGAAGGAAAAGAAGTCCGAGCCCGA
GCCCGAAGCCATGGACGTCGACGAGGCCCCCGCCGAGAAAGAGAACCAGG
AGCCCGAGGCCGAGCCGGAGGTGACCAAGGAAGAGAAGAAGAAGGAAAAG
AAGGAGAAGAAGGATAAGAAGGACAAGAAATCCAAGAAGGAGAAGAAGCA
GGGAGAAACGAATACCGAGGCTCAGCCTACCAGCGAACAGACCGAAGAGC
CTGCTGAGCAGGAGGAGCAGCAGAATAAGAAGAATGTGCGGTTTATCTGC
TTTGTCGGAAACCTCCCCTACTCCGCCGACAAAGAGTCCCTCACCAAGCA
CTTCGAGAAGATCGCCCCCGTTTCCGTCCGCGTAGCCACCCAGGTCGACA
AGCCGACCAAGTGCCGCGGCTTCGGCTTCATCGAGTTCGACAACTACGAC
CGCATGAAGACCTGTCTCAAGCTGTACCATCACTCCATGTTCAACGATGG
AAAGTACCCGCCGCGACGGATCAATGTGGAGCTGACTGCCGGCGGTGGCG
GTAACTCCAAGGACCGGAAAGACAAGATCGAGGCCAAGAACAAGAAGCTT
TTCGAAGAGAGACAGCGCAACGCCAAGGAAATTCAGAAGGAGAAGAAGCG
GTTAGAGCAGGTCGAGGAGACGGGTGTGGATGACTATGCTCATATTCATC
CTAGTCGGAGGCCCCGGATGGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265DRM |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2475460..2476526 + |
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