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CAN33_25775-T1, CAN33_25775-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25775-T1
Unique NameCAN33_25775-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2477078..2478039-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25775-T1 ID=CAN33_25775-T1|Name=CAN33_25775-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=962bp|location=Sequence derived from alignment at NKJJ01000002.1:2477078..2478039- (Aspergillus niger FDAARGOS_311)
ATGGCCACTGGTCCAGCTACTCAATCCCTCAAGGTCAGCATCATCCACCT
GCGTGTCCGTCTGTCAGATTGCGGCTAACGGAGCGCTGGTGCACACAGTG
TGTGGTGACGGGTGATGGTGCGGTAGGAAAAGTATGTTGCTCCCCTTTCA
GCCAGCTCGACCTCTCTCTCCCTCCCCCTCCCTCCCCCCTCTCGCTTCCT
AGATCGGTCGATTTCGTTATCGCTGTTGCTAATCGAACGATAGACATGTC
TCCTGATTTCGTACACGACCAACGCTTTCCCCGGCGAATATATCCCTACC
GTGTCCGTACCCCCCTTGGACCCTGATACTCCTCGTCTGATGCGGACCTC
GTGTGTTGACCGGATTCCCGCAGATTTGATAACTACACCGCTAGTGTCAT
GGTAGATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGG
AAGATTACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTC
CTGATCTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGC
CAAGGTGCTTCCTTCACCATCCCTATCGACCGGAGACCCGCTTACTGACC
CTGACGGATGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCC
CCATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACC
ATAGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGC
TCTGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGG
CCCTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGGTAT
GTTCGAACAAACCCATATACTACTGGAATTGGGGGACTAACGTTCACATA
GCGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGC
GTGATTCTGTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2477078..2478039-

>CAN33_25775-T1 ID=CAN33_25775-T1|Name=CAN33_25775-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3600bp|location=Sequence derived from alignment at NKJJ01000002.1:2477078..2478039- (Aspergillus niger FDAARGOS_311)
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAC1CAN33_25775Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25775-T1CAN33_25775-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25775-T1.cdsCAN33_25775-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25775-T1.exon6CAN33_25775-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_25775-T1.exon5CAN33_25775-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_25775-T1.exon4CAN33_25775-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_25775-T1.exon3CAN33_25775-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_25775-T1.exon2CAN33_25775-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25775-T1.exon1CAN33_25775-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase protein rac1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2477078..2478039 -
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