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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1589402..1590551- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2580-T1 ID=CAN33_2580-T1|Name=CAN33_2580-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1150bp|location=Sequence derived from alignment at NKJJ01000004.1:1589402..1590551- (Aspergillus niger FDAARGOS_311)
ATGGACCCTACCGAGTTGCACGATACCACCATGGTCGATGAGACCTCCCC
CAACAACGTCGACATGATTGACGATGTCGATATTGAGACGACGCCCAAGA
CTGAGGAAGAGTACGCTCAGTCTATGCTGACTCTTCGCGCCATCGTTTCG
TCCAAAGAAGCCGGCATCATCATTGGCAAGTCTGGCAAGAATGTTGCTGA
CCTGCGTGACGAAACCGGCGTCAAGGCTGGTGTGAGCAAGGTGGTTCCTG
GTGTTCATGACCGCGTCTTAACCGTCACTGGTCCTCTGAACGGCACTGCC
AGAGCCTATGCCTTGGTTGCCAAGGGTTTGCTCGAGGGCGCCCCGCAGAT
GGGCATGGGTGGCATTGTGTCCAACAATGGAACTCACCGTAAGTCATCCA
AGTTCTTCTACTCAACCAATATTTACTAGTGCCTTACAAACTGACTCTTG
TGTAGCCGTTCGGCTTTTGATCTCTCACAACCAGATGGGTACTATCATCG
GACGCCAAGGTCTCAAGATCAAGCACATTCAGGATGCATCGGGTGTGCGC
ATGGTCGCGCAGAAGGAAATGCTTCCCCAGTCGACTGAGCGCATTGTCGA
AGTGCAGGGCACCCCCGAGGGTATCGAGAAGGCCGTCTGGGAAATCGGAA
AATGCCTGATTGACGACTGGCAGCGCGGTACCGGTACTATTCTCTACAAC
CCCGCTGTCCGTGCGTCTGTTGGAACCACCACCAGCACCAGCACCATGAA
CCAGAGCGTCGGCAATGGCTACAACAGCCGTCCTTACAACCGCACCGGTA
ACGGTGCTGACTTCAGCGACCAGTCCGGTGGCTACGGCAGGCGATCCAAC
CCCGACACCAGCAACCGTGGTTATCCGCTTGTCACCGAAGATGGCGAGGA
AATCCAAACACAGAACATCAGCATCCCCGCCGACATGGTTGGCTGCATCA
TTGGCAGAGGTGGTAGCAAGATCACCGAGATCCGTAGGAGCTCTGGAGCC
CGGATCTCCATCGCCAAGGCTCCCCATGACGAAACGGGCGAGCGTATGTT
CACCATCATGGGTAGCGCTCAGGCGAATGAGAAGGCTCTTTACCTTCTGT
ATGAGAACCTCGAGGCTGAGAAGACCCGCCGCAGCCAGCTTCAGGAGTAA
back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1589402..1590551- >CAN33_2580-T1 ID=CAN33_2580-T1|Name=CAN33_2580-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2166bp|location=Sequence derived from alignment at NKJJ01000004.1:1589402..1590551- (Aspergillus niger FDAARGOS_311)
CCGTTCGGCTTTTGATCTCTCACAACCAGATGGGTACTATCATCGGACGC
CAAGGTCTCAAGATCAAGCACATTCAGGATGCATCGGGTGTGCGCATGGT
CGCGCAGAAGGAAATGCTTCCCCAGTCGACTGAGCGCATTGTCGAAGTGC
AGGGCACCCCCGAGGGTATCGAGAAGGCCGTCTGGGAAATCGGAAAATGC
CTGATTGACGACTGGCAGCGCGGTACCGGTACTATTCTCTACAACCCCGC
TGTCCGTGCGTCTGTTGGAACCACCACCAGCACCAGCACCATGAACCAGA
GCGTCGGCAATGGCTACAACAGCCGTCCTTACAACCGCACCGGTAACGGT
GCTGACTTCAGCGACCAGTCCGGTGGCTACGGCAGGCGATCCAACCCCGA
CACCAGCAACCGTGGTTATCCGCTTGTCACCGAAGATGGCGAGGAAATCC
AAACACAGAACATCAGCATCCCCGCCGACATGGTTGGCTGCATCATTGGC
AGAGGTGGTAGCAAGATCACCGAGATCCGTAGGAGCTCTGGAGCCCGGAT
CTCCATCGCCAAGGCTCCCCATGACGAAACGGGCGAGCGTATGTTCACCA
TCATGGGTAGCGCTCAGGCGAATGAGAAGGCTCTTTACCTTCTGTATGAG
AACCTCGAGGCTGAGAAGACCCGCCGCAGCCAGCTTCAGGAGTAAATGGA
CCCTACCGAGTTGCACGATACCACCATGGTCGATGAGACCTCCCCCAACA
ACGTCGACATGATTGACGATGTCGATATTGAGACGACGCCCAAGACTGAG
GAAGAGTACGCTCAGTCTATGCTGACTCTTCGCGCCATCGTTTCGTCCAA
AGAAGCCGGCATCATCATTGGCAAGTCTGGCAAGAATGTTGCTGACCTGC
GTGACGAAACCGGCGTCAAGGCTGGTGTGAGCAAGGTGGTTCCTGGTGTT
CATGACCGCGTCTTAACCGTCACTGGTCCTCTGAACGGCACTGCCAGAGC
CTATGCCTTGGTTGCCAAGGGTTTGCTCGAGGGCGCCCCGCAGATGGGCA
TGGGTGGCATTGTGTCCAACAATGGAACTCACCCCGTTCGGCTTTTGATC
TCTCACAACCAGATGGGTACTATCATCGGACGCCAAGGTCTCAAGATCAA
GCACATTCAGGATGCATCGGGTGTGCGCATGGTCGCGCAGAAGGAAATGC
TTCCCCAGTCGACTGAGCGCATTGTCGAAGTGCAGGGCACCCCCGAGGGT
ATCGAGAAGGCCGTCTGGGAAATCGGAAAATGCCTGATTGACGACTGGCA
GCGCGGTACCGGTACTATTCTCTACAACCCCGCTGTCCGTGCGTCTGTTG
GAACCACCACCAGCACCAGCACCATGAACCAGAGCGTCGGCAATGGCTAC
AACAGCCGTCCTTACAACCGCACCGGTAACGGTGCTGACTTCAGCGACCA
GTCCGGTGGCTACGGCAGGCGATCCAACCCCGACACCAGCAACCGTGGTT
ATCCGCTTGTCACCGAAGATGGCGAGGAAATCCAAACACAGAACATCAGC
ATCCCCGCCGACATGGTTGGCTGCATCATTGGCAGAGGTGGTAGCAAGAT
CACCGAGATCCGTAGGAGCTCTGGAGCCCGGATCTCCATCGCCAAGGCTC
CCCATGACGAAACGGGCGAGCGTATGTTCACCATCATGGGTAGCGCTCAG
GCGAATGAGAAGGCTCTTTACCTTCTGTATGAGAACCTCGAGGCTGAGAA
GACCCGCCGCAGCCAGCTTCAGGAGTAAATGGACCCTACCGAGTTGCACG
ATACCACCATGGTCGATGAGACCTCCCCCAACAACGTCGACATGATTGAC
GATGTCGATATTGAGACGACGCCCAAGACTGAGGAAGAGTACGCTCAGTC
TATGCTGACTCTTCGCGCCATCGTTTCGTCCAAAGAAGCCGGCATCATCA
TTGGCAAGTCTGGCAAGAATGTTGCTGACCTGCGTGACGAAACCGGCGTC
AAGGCTGGTGTGAGCAAGGTGGTTCCTGGTGTTCATGACCGCGTCTTAAC
CGTCACTGGTCCTCTGAACGGCACTGCCAGAGCCTATGCCTTGGTTGCCA
AGGGTTTGCTCGAGGGCGCCCCGCAGATGGGCATGGGTGGCATTGTGTCC
AACAATGGAACTCACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004088 |
| DBxref | InterPro:IPR036612 |
| DBxref | InterPro:IPR004087 |
| DBxref | PFAM:PF00013 |
| Product | KH domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1589402..1590551 - |
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