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CAN33_25845-T1, CAN33_25845-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_25845-T1
Unique NameCAN33_25845-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2519090..2519805+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_25845-T1 ID=CAN33_25845-T1|Name=CAN33_25845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=716bp|location=Sequence derived from alignment at NKJJ01000002.1:2519090..2519805+ (Aspergillus niger FDAARGOS_311)
ATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAGCA
GCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAGCT
CCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCGAG
AGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGGTGCGTATTGAGA
TCAATTGATGCCGAGATCTTGCAAGGATGTGGTTGTGCTAACTCAATGGC
TGTCTTACTGCTCCAGATCTGTGGCGCAAGCTCTCCATCTAGTATGTGGG
CTAGCTATTACTACCGCAATTGACTTCTAGTAACATTCTACTTTTTCGCA
GCGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACGCCTACAACCTT
TGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCGCTCGAGGAGCG
TACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTTCCCCTGGGGAG
ACGGTGACAAGGTGCGTCCCAGACATTTTACTCTCATGCAATGCCAATCT
GAGTGCTGACGATTTTATTTCTTTCTCCAGACCATCTTGTAAGTTCCTTA
CACCCGAAATTTCCAGCGTCGGGCATAACTCGACAGTCAATAATAACGAT
GCCTTCTAACAAACTCACAGCTGGAACTCCGACGTCAACTACCACAACAA
GGACAAGGCTACCTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2519090..2519805+

>CAN33_25845-T1 ID=CAN33_25845-T1|Name=CAN33_25845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2130bp|location=Sequence derived from alignment at NKJJ01000002.1:2519090..2519805+ (Aspergillus niger FDAARGOS_311)
ATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAGCA
GCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAGCT
CCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCGAG
AGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGCGCAA
GCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACG
CCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCG
CTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTT
CCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTCAACT
ACCACAACAAGGACAAGGCTACCTAAATGTTCCCTCAGCGCAACGCCCTT
CGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGCTC
CACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTGGG
CCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACGCT
GCTGCTACCAGTGATCTGTGGCGCAAGCTCTCCATCTACGCCGTCATTCC
TGTCCTGATTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCACT
GGGAACACTGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACCCC
TACCAGAACATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAGAC
CATCTTCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTACCT
AAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAG
CAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAG
CTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCG
AGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGCGC
AAGCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAA
CGCCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCC
CGCTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAAC
TTCCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTCAA
CTACCACAACAAGGACAAGGCTACCTAAATGTTCCCTCAGCGCAACGCCC
TTCGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGC
TCCACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTG
GGCCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACG
CTGCTGCTACCAGTGATCTGTGGCGCAAGCTCTCCATCTACGCCGTCATT
CCTGTCCTGATTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCA
CTGGGAACACTGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACC
CCTACCAGAACATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAG
ACCATCTTCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTAC
CTAAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCC
AGCAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAAC
AGCTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCG
CGAGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGC
GCAAGCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATC
AACGCCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCC
CCCGCTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGA
ACTTCCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTC
AACTACCACAACAAGGACAAGGCTACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005751mitochondrial respiratory chain complex IV
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_25845CAN33_25845Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25845-T1CAN33_25845-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25845-T1.exon1CAN33_25845-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_25845-T1.exon2CAN33_25845-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_25845-T1.exon3CAN33_25845-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_25845-T1.exon4CAN33_25845-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_25845-T1.exon5CAN33_25845-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_25845-T1.cdsCAN33_25845-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteBUSCO:EOG092654RM
DBxrefInterPro:IPR018507
DBxrefInterPro:IPR036418
DBxrefInterPro:IPR001349
DBxrefPFAM:PF02046
ProductCytochrome c oxidase subunit VIa family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2519090..2519805 +
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