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CAN33_26015-T1, CAN33_26015-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26015-T1
Unique NameCAN33_26015-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2626434..2627882-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26015-T1 ID=CAN33_26015-T1|Name=CAN33_26015-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1449bp|location=Sequence derived from alignment at NKJJ01000002.1:2626434..2627882- (Aspergillus niger FDAARGOS_311)
ATGGCCTTTCGCGGTGAACGTTTCGTCCTTGACCTGGGCTCTGACGATGA
GTCCCCTTCAGCGGACAGCTATGATGGCGCTCAGGGTCCCTCGACCCTCA
ACATCCCCGGGATGATCGGCGAAATCCGTGAACGCTCCCCCGCCGCGGCG
CCCGCCCCGCCTACTCCAAAACCAACCACCACCGGCTTTCCAGCCCATCG
CCGTCGGGCCAAACCCTCTACATTTAAACAGCGACGGGACCCAGCTCCGT
CTGCAACTGCATCCGCCTCTACTTCTGCACCGGGTCCGAAGGATGAGAAA
ACGGCCATCGCGCAGGAAAATGCGCGGCAACTGGCCTCCATGTCGGACGC
GCAGATTGAACATGAGCGCCAGGAACTGATGGAAACCATGGACACGTCTC
TACTTGAGCGCTTCCTTCGTCGAGCTCGTATCGACGCCGACGACACCCCC
ACTACCAGCTCCAAACCTACCCGCGAACAACCCGCCGCTACTGAACCAGT
CCAAGACAACAAAAAAGGAAAAGAAGCAGCAGCAGCAGCAGCAGAACCTG
CTCCTCTTTCACCACCAGCATCAACAACAAAAACGGCAGCAACCACCAAA
CCACCCTCCCCCAAGAACGACACCTCCCAAGATGACGTCCCACCAACCCA
AATTCCCTCGGACCTCCACGCCGCCGCCGAACTTCCCCCCTCAGGCAGCG
TACACTTCCCTGCGCCTCCATCCCAAGCCTTCCCAATGCCCAACCTAGAC
CCGTCCTCACCCTCATTCCTCTCCGACCTCCAAACCCATTACTTTCCTAA
CATCTCACACGACCCCTCCGCCCTCTCCTGGCTACAACCCCCCTCCGCAG
ACCCCGAAGACCCGGACTCCACGTCCGCCTACCACCCCGCCAGCAACGCC
GAAGCCATCCACCCAGCCAACCTACGCTTCTCTCTCCTCGGCACGGTACT
CTCCCCATCAACCTCTCTCTCCCTTCCCACGACCCTGGGCCTACATCATC
ACGGCAAAGACCCCCATGCAGCGGGGTACACCATTCCCGAACTGGCCATC
CTGAGTCAGTCGACGTTCCCGGCGCAACGGTGCATCGCGTGGCAGGTTCT
CGGGCGGATTCTGTTCCGTCTGGGGAAGGGCCAATTCGGAGAAAGGGGGA
GTCCGCTGGTCGAGGGGCTGTGGTCTGTTGTGGAGAAGGAGGGTGTTGTG
GCAGGTATGTTGGCTGAAGCGGATGGTGCGACTCCTGGGACGGGTTCTTC
CCGTCGTGCTGGACAGGAGAAAGAAGGTGACGCAGAGAAGGAGACAACGG
AGAATGCTACTACTGCTGGTGCTGGTGGTACTAGTCGTCGACAACATGCT
AGCGCTACTGCGTGGGCAGTCGAGGGTGTCTGGTTATGGCAGATGGGGGG
TGGAGGTGACCGGGGAGTATTGAAGGAGGGAGCGATTCGGTCTCAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2626434..2627882-

>CAN33_26015-T1 ID=CAN33_26015-T1|Name=CAN33_26015-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2124bp|location=Sequence derived from alignment at NKJJ01000002.1:2626434..2627882- (Aspergillus niger FDAARGOS_311)
CAACCACCAAACCACCCTCCCCCAAGAACGACACCTCCCAAGATGACGTC
CCACCAACCCAAATTCCCTCGGACCTCCACGCCGCCGCCGAACTTCCCCC
CTCAGGCAGCGTACACTTCCCTGCGCCTCCATCCCAAGCCTTCCCAATGC
CCAACCTAGACCCGTCCTCACCCTCATTCCTCTCCGACCTCCAAACCCAT
TACTTTCCTAACATCTCACACGACCCCTCCGCCCTCTCCTGGCTACAACC
CCCCTCCGCAGACCCCGAAGACCCGGACTCCACGTCCGCCTACCACCCCG
CCAGCAACGCCGAAGCCATCCACCCAGCCAACCTACGCTTCTCTCTCCTC
GGCACGGTACTCTCCCCATCAACCTCTCTCTCCCTTCCCACGACCCTGGG
CCTACATCATCACGGCAAAGACCCCCATGCAGCGGGGTACACCATTCCCG
AACTGGCCATCCTGAGTCAGTCGACGTTCCCGGCGCAACGGTGCATCGCG
TGGCAGGTTCTCGGGCGGATTCTGTTCCGTCTGGGGAAGGGCCAATTCGG
AGAAAGGGGGAGTCCGCTGGTCGAGGGGCTGTGGTCTGTTGTGGAGAAGG
AGGGTGTTGTGGCAGGTATGTTGGCTGAAGCGGATGGTGCGACTCCTGGG
ACGGGTTCTTCCCGTCGTGCTGGACAGGAGAAAGAAGGTGACGCAGAGAA
GGAGACAACGGAGAATGCTACTACTGCTGGTGCTGGTGGTACTAGTCGTC
GACAACATGCTAGCGCTACTGCGTGGGCAGTCGAGGGTGTCTGGTTATGG
CAGATGGGGGGTGGAGGTGACCGGGGAGTATTGAAGGAGGGAGCGATTCG
GTCTCAGTGAATGGCCTTTCGCGGTGAACGTTTCGTCCTTGACCTGGGCT
CTGACGATGAGTCCCCTTCAGCGGACAGCTATGATGGCGCTCAGGGTCCC
TCGACCCTCAACATCCCCGGGATGATCGGCGAAATCCGTGAACGCTCCCC
CGCCGCGGCGCCCGCCCCGCCTACTCCAAAACCAACCACCACCGGCTTTC
CAGCCCATCGCCCAACCACCAAACCACCCTCCCCCAAGAACGACACCTCC
CAAGATGACGTCCCACCAACCCAAATTCCCTCGGACCTCCACGCCGCCGC
CGAACTTCCCCCCTCAGGCAGCGTACACTTCCCTGCGCCTCCATCCCAAG
CCTTCCCAATGCCCAACCTAGACCCGTCCTCACCCTCATTCCTCTCCGAC
CTCCAAACCCATTACTTTCCTAACATCTCACACGACCCCTCCGCCCTCTC
CTGGCTACAACCCCCCTCCGCAGACCCCGAAGACCCGGACTCCACGTCCG
CCTACCACCCCGCCAGCAACGCCGAAGCCATCCACCCAGCCAACCTACGC
TTCTCTCTCCTCGGCACGGTACTCTCCCCATCAACCTCTCTCTCCCTTCC
CACGACCCTGGGCCTACATCATCACGGCAAAGACCCCCATGCAGCGGGGT
ACACCATTCCCGAACTGGCCATCCTGAGTCAGTCGACGTTCCCGGCGCAA
CGGTGCATCGCGTGGCAGGTTCTCGGGCGGATTCTGTTCCGTCTGGGGAA
GGGCCAATTCGGAGAAAGGGGGAGTCCGCTGGTCGAGGGGCTGTGGTCTG
TTGTGGAGAAGGAGGGTGTTGTGGCAGGTATGTTGGCTGAAGCGGATGGT
GCGACTCCTGGGACGGGTTCTTCCCGTCGTGCTGGACAGGAGAAAGAAGG
TGACGCAGAGAAGGAGACAACGGAGAATGCTACTACTGCTGGTGCTGGTG
GTACTAGTCGTCGACAACATGCTAGCGCTACTGCGTGGGCAGTCGAGGGT
GTCTGGTTATGGCAGATGGGGGGTGGAGGTGACCGGGGAGTATTGAAGGA
GGGAGCGATTCGGTCTCAGTGAATGGCCTTTCGCGGTGAACGTTTCGTCC
TTGACCTGGGCTCTGACGATGAGTCCCCTTCAGCGGACAGCTATGATGGC
GCTCAGGGTCCCTCGACCCTCAACATCCCCGGGATGATCGGCGAAATCCG
TGAACGCTCCCCCGCCGCGGCGCCCGCCCCGCCTACTCCAAAACCAACCA
CCACCGGCTTTCCAGCCCATCGCC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26015CAN33_26015Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26015-T1CAN33_26015-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26015-T1.cdsCAN33_26015-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26015-T1.exon2CAN33_26015-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26015-T1.exon1CAN33_26015-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092606AD
DBxrefInterPro:IPR013929
DBxrefPFAM:PF08620
ProductRPAP1-like C-terminal family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2626434..2627882 -
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