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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2645185..2646756- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26040-T1 ID=CAN33_26040-T1|Name=CAN33_26040-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1572bp|location=Sequence derived from alignment at NKJJ01000002.1:2645185..2646756- (Aspergillus niger FDAARGOS_311)
ATGCCAGACCTGCGCCGTCAAGTATTGGAGAGTGGCAAAACCATCTCTCG
CAAAGCTGCTTCCCGCGAAGGCTCTCGACGTACTTCGCGCGCCAACTCTA
CCCAGAATTCCCGCCATTCCTCTCAGAATCAAAGTCGACATGCCTCAGAC
GAGGAAGACCTTGACAGTCTAAGCGATGACACGGCCATGAGGTGAGCATT
CCATGATCACTGCTTTCTCCCCCTCCAATTTATTTTTCTCTTTGGTTTCC
CCCCAAACACGGAATGATGTCATCGTCGTCCGTTCCCTCTGTGTGCTCCG
TTACTAATGCGTGTTTTACGACCCAGCATTGGCTCGTTGGACGATCTAAC
CGATAACCCCGATCTGGACAACCATGACTGGGTTGAGGAGCTTGGGGACG
TCATCGAAGATATTCTGGACCGCAAACGCAGCAGCAATTTGAGTCGCGAA
GAGGCTTACGCTGCGTTTTGCCGACTAGCCAAATATCACTATGTCGAGGA
ACAAATTCGCGGTCGCGTTCTGGACTTGGTAGCGGCATTCAACCGCAGTA
TCAAGTTCGAGACCAGTGTGCGCGAAACCACTCTGGCGCTCCGTGCTGTC
GAGCTCCTCGCCATTTCAGCCTACGATAATACCATCTACGAACATGTCGA
GCCCTTGTTGACTCGCACCGTGCGAGATTCAACCTCTAACACGGTCAAGG
CAGCAGCGATCCACTGTCTGGGCGTCTGCACCATCCATGCAGGCGCTAGC
GAAGATGGGATTCTCGACCAGATGACGTTTTTCTTGGACATTGCTGCCTC
GGACGGGCAGTCGATCGGTGCTGGGGACGACGCAGCCAGCGTCGTTGCTG
CTCTGCAAGAATGGGGCGTGCTTGCGACCTATATCGACGATCTTGAAGGC
GAAAGCGAGGATGCCGTGCAGATCTTCATGGACCAGCTGAACAGTGGCGA
TTCTGCGGTCCAGATTGCTGCCGGCGAGAACATTGCGCTCTTGTACGAGA
AGAGCTATACTCCACAGGAGGACGATGAGGACGACGAGGACGAGGAGGAA
GAATCGGAAGAGGAAACCTTCTTGTCCGGAGGTCGCGGCAACGGCCCCAA
GTTGATCAAGCGCTACAACGCCTACCACAACACGCACGAGCTCGAGCAGC
AACTCCATTCGCTGGCCAAAGTCCACAGCAAACGGATCAGCAAACGCGAT
AAGAAGAGTCTACACAGCAACTTCGCCTCCATCCTTACGACGGTGGAGAA
TCCCCGTCGGGGACCCATGTACAACACCGCTATCGACCAGGACACCAACC
GCCACTACGGCAGCAAGCTGACGGTCAAGATTGGCCGACAGGGCGTGATG
AACATCGATCGCTGGTGGAAATGGACGCGGCTGAGCTCGCTTCGACGCAC
CCTGCAGGGCGGCTTCGCAGCGCACTACTATCAAGGCAACCGCGCCGTGC
TGGAAAGCCTTCCGGTGATCATGCGCATGGACACGCCGTCGGACCGAGGG
TATGCCAAGCGCACGGCCAAACATCGGGATAGTCGTCGGTGGGCGGTCCA
CGAGGCCTCGGACGAAGACTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2645185..2646756- >CAN33_26040-T1 ID=CAN33_26040-T1|Name=CAN33_26040-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3897bp|location=Sequence derived from alignment at NKJJ01000002.1:2645185..2646756- (Aspergillus niger FDAARGOS_311)
GTCGCGGCAACGGCCCCAAGTTGATCAAGCGCTACAACGCCTACCACAAC
ACGCACGAGCTCGAGCAGCAACTCCATTCGCTGGCCAAAGTCCACAGCAA
ACGGATCAGCAAACGCGATAAGAAGAGTCTACACAGCAACTTCGCCTCCA
TCCTTACGACGGTGGAGAATCCCCGTCGGGGACCCATGTACAACACCGCT
ATCGACCAGGACACCAACCGCCACTACGGCAGCAAGCTGACGGTCAAGAT
TGGCCGACAGGGCGTGATGAACATCGATCGCTGGTGGAAATGGACGCGGC
TGAGCTCGCTTCGACGCACCCTGCAGGGCGGCTTCGCAGCGCACTACTAT
CAAGGCAACCGCGCCGTGCTGGAAAGCCTTCCGGTGATCATGCGCATGGA
CACGCCGTCGGACCGAGGGTATGCCAAGCGCACGGCCAAACATCGGGATA
GTCGTCGGTGGGCGGTCCACGAGGCCTCGGACGAAGACTAGCATTGGCTC
GTTGGACGATCTAACCGATAACCCCGATCTGGACAACCATGACTGGGTTG
AGGAGCTTGGGGACGTCATCGAAGATATTCTGGACCGCAAACGCAGCAGC
AATTTGAGTCGCGAAGAGGCTTACGCTGCGTTTTGCCGACTAGCCAAATA
TCACTATGTCGAGGAACAAATTCGCGGTCGCGTTCTGGACTTGGTAGCGG
CATTCAACCGCAGTATCAAGTTCGAGACCAGTGTGCGCGAAACCACTCTG
GCGCTCCGTGCTGTCGAGCTCCTCGCCATTTCAGCCTACGATAATACCAT
CTACGAACATGTCGAGCCCTTGTTGACTCGCACCGTGCGAGATTCAACCT
CTAACACGGTCAAGGCAGCAGCGATCCACTGTCTGGGCGTCTGCACCATC
CATGCAGGCGCTAGCGAAGATGGGATTCTCGACCAGATGACGTTTTTCTT
GGACATTGCTGCCTCGGACGGGCAGTCGATCGGTGCTGGGGACGACGCAG
CCAGCGTCGTTGCTGCTCTGCAAGAATGGGGCGTGCTTGCGACCTATATC
GACGATCTTGAAGGCGAAAGCGAGGATGCCGTGCAGATCTTCATGGACCA
GCTGAACAATGCCAGACCTGCGCCGTCAAGTATTGGAGAGTGGCAAAACC
ATCTCTCGCAAAGCTGCTTCCCGCGAAGGCTCTCGACGTACTTCGCGCGC
CAACTCTACCCAGAATTCCCGCCATTCCTCTCAGAATCAAAGTCGACATG
CCTCAGACGAGGAAGACCTTGACAGTCTAAGCGATGACACGGCCATGAGG
TCGCGGCAACGGCCCCAAGTTGATCAAGCGCTACAACGCCTACCACAACA
CGCACGAGCTCGAGCAGCAACTCCATTCGCTGGCCAAAGTCCACAGCAAA
CGGATCAGCAAACGCGATAAGAAGAGTCTACACAGCAACTTCGCCTCCAT
CCTTACGACGGTGGAGAATCCCCGTCGGGGACCCATGTACAACACCGCTA
TCGACCAGGACACCAACCGCCACTACGGCAGCAAGCTGACGGTCAAGATT
GGCCGACAGGGCGTGATGAACATCGATCGCTGGTGGAAATGGACGCGGCT
GAGCTCGCTTCGACGCACCCTGCAGGGCGGCTTCGCAGCGCACTACTATC
AAGGCAACCGCGCCGTGCTGGAAAGCCTTCCGGTGATCATGCGCATGGAC
ACGCCGTCGGACCGAGGGTATGCCAAGCGCACGGCCAAACATCGGGATAG
TCGTCGGTGGGCGGTCCACGAGGCCTCGGACGAAGACTAGCATTGGCTCG
TTGGACGATCTAACCGATAACCCCGATCTGGACAACCATGACTGGGTTGA
GGAGCTTGGGGACGTCATCGAAGATATTCTGGACCGCAAACGCAGCAGCA
ATTTGAGTCGCGAAGAGGCTTACGCTGCGTTTTGCCGACTAGCCAAATAT
CACTATGTCGAGGAACAAATTCGCGGTCGCGTTCTGGACTTGGTAGCGGC
ATTCAACCGCAGTATCAAGTTCGAGACCAGTGTGCGCGAAACCACTCTGG
CGCTCCGTGCTGTCGAGCTCCTCGCCATTTCAGCCTACGATAATACCATC
TACGAACATGTCGAGCCCTTGTTGACTCGCACCGTGCGAGATTCAACCTC
TAACACGGTCAAGGCAGCAGCGATCCACTGTCTGGGCGTCTGCACCATCC
ATGCAGGCGCTAGCGAAGATGGGATTCTCGACCAGATGACGTTTTTCTTG
GACATTGCTGCCTCGGACGGGCAGTCGATCGGTGCTGGGGACGACGCAGC
CAGCGTCGTTGCTGCTCTGCAAGAATGGGGCGTGCTTGCGACCTATATCG
ACGATCTTGAAGGCGAAAGCGAGGATGCCGTGCAGATCTTCATGGACCAG
CTGAACAATGCCAGACCTGCGCCGTCAAGTATTGGAGAGTGGCAAAACCA
TCTCTCGCAAAGCTGCTTCCCGCGAAGGCTCTCGACGTACTTCGCGCGCC
AACTCTACCCAGAATTCCCGCCATTCCTCTCAGAATCAAAGTCGACATGC
CTCAGACGAGGAAGACCTTGACAGTCTAAGCGATGACACGGCCATGAGGT
CGCGGCAACGGCCCCAAGTTGATCAAGCGCTACAACGCCTACCACAACAC
GCACGAGCTCGAGCAGCAACTCCATTCGCTGGCCAAAGTCCACAGCAAAC
GGATCAGCAAACGCGATAAGAAGAGTCTACACAGCAACTTCGCCTCCATC
CTTACGACGGTGGAGAATCCCCGTCGGGGACCCATGTACAACACCGCTAT
CGACCAGGACACCAACCGCCACTACGGCAGCAAGCTGACGGTCAAGATTG
GCCGACAGGGCGTGATGAACATCGATCGCTGGTGGAAATGGACGCGGCTG
AGCTCGCTTCGACGCACCCTGCAGGGCGGCTTCGCAGCGCACTACTATCA
AGGCAACCGCGCCGTGCTGGAAAGCCTTCCGGTGATCATGCGCATGGACA
CGCCGTCGGACCGAGGGTATGCCAAGCGCACGGCCAAACATCGGGATAGT
CGTCGGTGGGCGGTCCACGAGGCCTCGGACGAAGACTAGCATTGGCTCGT
TGGACGATCTAACCGATAACCCCGATCTGGACAACCATGACTGGGTTGAG
GAGCTTGGGGACGTCATCGAAGATATTCTGGACCGCAAACGCAGCAGCAA
TTTGAGTCGCGAAGAGGCTTACGCTGCGTTTTGCCGACTAGCCAAATATC
ACTATGTCGAGGAACAAATTCGCGGTCGCGTTCTGGACTTGGTAGCGGCA
TTCAACCGCAGTATCAAGTTCGAGACCAGTGTGCGCGAAACCACTCTGGC
GCTCCGTGCTGTCGAGCTCCTCGCCATTTCAGCCTACGATAATACCATCT
ACGAACATGTCGAGCCCTTGTTGACTCGCACCGTGCGAGATTCAACCTCT
AACACGGTCAAGGCAGCAGCGATCCACTGTCTGGGCGTCTGCACCATCCA
TGCAGGCGCTAGCGAAGATGGGATTCTCGACCAGATGACGTTTTTCTTGG
ACATTGCTGCCTCGGACGGGCAGTCGATCGGTGCTGGGGACGACGCAGCC
AGCGTCGTTGCTGCTCTGCAAGAATGGGGCGTGCTTGCGACCTATATCGA
CGATCTTGAAGGCGAAAGCGAGGATGCCGTGCAGATCTTCATGGACCAGC
TGAACAATGCCAGACCTGCGCCGTCAAGTATTGGAGAGTGGCAAAACCAT
CTCTCGCAAAGCTGCTTCCCGCGAAGGCTCTCGACGTACTTCGCGCGCCA
ACTCTACCCAGAATTCCCGCCATTCCTCTCAGAATCAAAGTCGACATGCC
TCAGACGAGGAAGACCTTGACAGTCTAAGCGATGACACGGCCATGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR007701 |
| DBxref | PFAM:PF05004 |
| Product | Interferon-related developmental regulator (IFRD) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2645185..2646756 - |
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