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CAN33_26100-T1, CAN33_26100-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26100-T1
Unique NameCAN33_26100-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2680239..2681292+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26100-T1 ID=CAN33_26100-T1|Name=CAN33_26100-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1054bp|location=Sequence derived from alignment at NKJJ01000002.1:2680239..2681292+ (Aspergillus niger FDAARGOS_311)
ATGGGCGACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCA
GGAATTCAACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAG
AAGCCTACGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGC
GTCGCTAACCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCA
ATATCAACTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTC
GTGGATGGGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGAT
GGAAAGACCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGG
ATACCCAGGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGG
TGGAGAATGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAG
TTGGTGGGCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAG
GTATGTCTGTCACATTTAATCTAAATCACTGAAGCGATAGGATACTGATT
ATCTCAAACAGCTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCAC
CATCACCAAACTATCAACACAGGACTACCTACCCCTAGAGAACGGCATCC
CATTGGGCCCCATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACC
TTCGGCCCGCAGAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCT
GTCCCGCGTTCCCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCG
AGTTCCAGCACCCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAG
CCGGCCTTCCAATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGA
CGGGAAACCGAGTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTC
GGTTTGTCAATGCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTC
CCGAAGGGGAAGAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGA
GTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2680239..2681292+

>CAN33_26100-T1 ID=CAN33_26100-T1|Name=CAN33_26100-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1986bp|location=Sequence derived from alignment at NKJJ01000002.1:2680239..2681292+ (Aspergillus niger FDAARGOS_311)
ATGGGCGACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCA
GGAATTCAACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAG
AAGCCTACGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGC
GTCGCTAACCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCA
ATATCAACTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTC
GTGGATGGGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGAT
GGAAAGACCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGG
ATACCCAGGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGG
TGGAGAATGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAG
TTGGTGGGCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAG
CTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAAC
TATCAACACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCC
ATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCA
GAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTC
CCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCAC
CCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCA
ATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGA
GTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAAT
GCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAA
GAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAGATGGGCG
ACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCAGGAATTC
AACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAGAAGCCTA
CGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGCGTCGCTA
ACCGCATCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCAATATCAA
CTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTCGTGGATG
GGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGATGGAAAGA
CCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGGATACCCA
GGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGGTGGAGAA
TGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAGTTGGTGG
GCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAGCTACTTC
AACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAACTATCAAC
ACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCCATTGAGC
CCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCAGAACCAA
TTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTCCCCTCGA
TACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCACCCAGACA
CGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCAATTCTAC
ACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGAGTCGGGG
CCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAATGCGGTCA
ATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAAGAAGTAC
GGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030246carbohydrate binding
GO:0016853isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26100CAN33_26100Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26100-T1.exon1CAN33_26100-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_26100-T1.exon2CAN33_26100-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26100-T1.cdsCAN33_26100-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26100-T1CAN33_26100-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR018052
DBxrefInterPro:IPR014718
DBxrefInterPro:IPR008183
DBxrefPFAM:PF01263
ProductAldose 1-epimerase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2680239..2681292 +
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