You are here

Home

CAN33_26235-T1, CAN33_26235-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26235-T1
Unique NameCAN33_26235-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2776735..2778427+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26235-T1 ID=CAN33_26235-T1|Name=CAN33_26235-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1693bp|location=Sequence derived from alignment at NKJJ01000002.1:2776735..2778427+ (Aspergillus niger FDAARGOS_311)
ATGACCGACGCCTTAGCCTCTCAGCTGAATAACACTACTTTAGGGTACAT
TCACTGTCGCACGCTGGTTGATCCATATGATGAGGCTAACTTGAACACTT
CGAAGGGATGCGAGCTCAGACGCGAAGTGGAAGGAGCAATTGAATGTCCC
TGCCAAAGATGCAAGACCACAAACTGAGGTTCGTCTGACTTATGAACAAA
TGGTATAAATGTCGATAGCGATCTAATGCGGCTTAGGATGTGACTGCTAC
GAAAGGCTTGGAATTCGAAGACTTCTATATCAAACGCGAACTGATGATGG
GTATATTCGAAGCTGGGTTCGAAAAGCCTTCTCCAATTCAGGAAGAGACG
ATACCAGTTGCTCTTACAGGCAGGGATATCTTGGCGCGAGCCAAGAATGG
CACAGGAAAAACAGCAGCTTTCGTTATCCCTACCTTGGAGCGCATCAATC
CTAAAAGCACCAAGACACAAGCCCTTATCCTTGTTCCTACGAGAGAGCTG
GCGCTCCAAACGTCACATGTCTGCAAAACCTTGGGAAAGCATCTTGGTAT
CAATGTCATGGTCACCACAGGAGGTACTGGCTTGATGGATGACATCATTC
GGCTGAACGACGCAGTCCATATTCTCGTTGGGACCCCAGGAAGAGTCCTG
GACCTGGCCAGCAAAGGGGTTGCTGACCTTTCCGAGTGTCCTACCTTTGT
TATGGACGAGGCTGATAAATTGCTGTCACCTGAATTCACGCCAGTCATCG
AGCAACTACTATCATTCCATCCTAAAGACCGCCAGGTTATGCTTTTCAGC
GCCACCTTTCCACTTATTGTGAAGTCATTCAAGGTATGCTTCGTACACAA
AGATATCGCATTTCTCCTCGTGGGTGCTGATATTTTTAGGACAAACACAT
GCGCAATCCTTACGAGATCAATCTCATGGATGAGCTCACTCTCCGCGGTA
TTACGCAGTATTATGCTTTTGTTGAGGAAAAGCAGAAGGTCCACTGCTTG
AACACACTCTTCTCCAAGTTACAAATCAATCAATCTATAATCTTCTGCAA
TTCTACTAACCGAGTCGAGTTGCTCGCGAAGAAGATAACGGAATTGGGTT
ATTCTTGCTTCTATTCCCATGCCAGAATGCTTCAGCAGCATCGCAACCGG
GTGTTCCACGATTTCAGGAATGGCGTTTGCCGGAACCTTGTTTGCTCGGA
TTTGTTAACTCGAGGTATTGATATTCAAGCCGTCAATGTTGTCATAAATT
TTGATTTTCCGAAGAACGCCGAGACTTATCTGCACCGAATTGGTCGCTCT
GGTCGCTTTGGACATCTTGGTCTTGCTATCAACCTTATCAATTGGGAAGA
CCGGTTCAATTTATATAAGATTGAGCAGGAACTTGGAACTGAGATCCAGC
CGATTCCGCAAAACATCGACAAGAAGCTTTATGTCTACGACTCACCGGAC
ACAATTCCACGCCCTATTGCCAACCCATCCCAGCCTCAGATTACTGCTCA
AGCCGCGAATGCAAACATTGGTGAGCGTCGTCACAATCACCATATGAATG
GCGGGCAGTACCAGTACGGTAGGGGCCGGGGCTCTTATCGCGGAGGTCGT
GGACAAGGCCAGCGTCGCAATATGCAGAACGAAACCAAGTTTGGCACTCA
AGGACAGTCAAGCGGCAAGTCCCACCCGACGCAAGTGTCATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:2776735..2778427+

>CAN33_26235-T1 ID=CAN33_26235-T1|Name=CAN33_26235-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6072bp|location=Sequence derived from alignment at NKJJ01000002.1:2776735..2778427+ (Aspergillus niger FDAARGOS_311)
ATGACCGACGCCTTAGCCTCTCAGCTGAATAACACTACTTTAGGGGATGC
GAGCTCAGACGCGAAGTGGAAGGAGCAATTGAATGTCCCTGCCAAAGATG
CAAGACCACAAACTGAGGATGTGACTGCTACGAAAGGCTTGGAATTCGAA
GACTTCTATATCAAACGCGAACTGATGATGGGTATATTCGAAGCTGGGTT
CGAAAAGCCTTCTCCAATTCAGGAAGAGACGATACCAGTTGCTCTTACAG
GCAGGGATATCTTGGCGCGAGCCAAGAATGGCACAGGAAAAACAGCAGCT
TTCGTTATCCCTACCTTGGAGCGCATCAATCCTAAAAGCACCAAGACACA
AGCCCTTATCCTTGTTCCTACGAGAGAGCTGGCGCTCCAAACGTCACATG
TCTGCAAAACCTTGGGAAAGCATCTTGGTATCAATGTCATGGTCACCACA
GGAGGTACTGGCTTGATGGATGACATCATTCGGCTGAACGACGCAGTCCA
TATTCTCGTTGGGACCCCAGGAAGAGTCCTGGACCTGGCCAGCAAAGGGG
TTGCTGACCTTTCCGAGTGTCCTACCTTTGTTATGGACGAGGCTGATAAA
TTGCTGTCACCTGAATTCACGCCAGTCATCGAGCAACTACTATCATTCCA
TCCTAAAGACCGCCAGGTTATGCTTTTCAGCGCCACCTTTCCACTTATTG
TGAAGTCATTCAAGGACAAACACATGCGCAATCCTTACGAGATCAATCTC
ATGGATGAGCTCACTCTCCGCGGTATTACGCAGTATTATGCTTTTGTTGA
GGAAAAGCAGAAGGTCCACTGCTTGAACACACTCTTCTCCAAGTTACAAA
TCAATCAATCTATAATCTTCTGCAATTCTACTAACCGAGTCGAGTTGCTC
GCGAAGAAGATAACGGAATTGGGTTATTCTTGCTTCTATTCCCATGCCAG
AATGCTTCAGCAGCATCGCAACCGGGTGTTCCACGATTTCAGGAATGGCG
TTTGCCGGAACCTTGTTTGCTCGGATTTGTTAACTCGAGGTATTGATATT
CAAGCCGTCAATGTTGTCATAAATTTTGATTTTCCGAAGAACGCCGAGAC
TTATCTGCACCGAATTGGTCGCTCTGGTCGCTTTGGACATCTTGGTCTTG
CTATCAACCTTATCAATTGGGAAGACCGGTTCAATTTATATAAGATTGAG
CAGGAACTTGGAACTGAGATCCAGCCGATTCCGCAAAACATCGACAAGAA
GCTTTATGTCTACGACTCACCGGACACAATTCCACGCCCTATTGCCAACC
CATCCCAGCCTCAGATTACTGCTCAAGCCGCGAATGCAAACATTGGTGAG
CGTCGTCACAATCACCATATGAATGGCGGGCAGTACCAGTACGGTAGGGG
CCGGGGCTCTTATCGCGGAGGTCGTGGACAAGGCCAGCGTCGCAATATGC
AGAACGAAACCAAGTTTGGCACTCAAGGACAGTCAAGCGGCAAGTCCCAC
CCGACGCAAGTGTCATAGATGACCGACGCCTTAGCCTCTCAGCTGAATAA
CACTACTTTAGGGGATGCGAGCTCAGACGCGAAGTGGAAGGAGCAATTGA
ATGTCCCTGCCAAAGATGCAAGACCACAAACTGAGGATGTGACTGCTACG
AAAGGCTTGGAATTCGAAGACTTCTATATCAAACGCGAACTGATGATGGG
TATATTCGAAGCTGGGTTCGAAAAGCCTTCTCCAATTCAGGAAGAGACGA
TACCAGTTGCTCTTACAGGCAGGGATATCTTGGCGCGAGCCAAGAATGGC
ACAGGAAAAACAGCAGCTTTCGTTATCCCTACCTTGGAGCGCATCAATCC
TAAAAGCACCAAGACACAAGCCCTTATCCTTGTTCCTACGAGAGAGCTGG
CGCTCCAAACGTCACATGTCTGCAAAACCTTGGGAAAGCATCTTGGTATC
AATGTCATGGTCACCACAGGAGGTACTGGCTTGATGGATGACATCATTCG
GCTGAACGACGCAGTCCATATTCTCGTTGGGACCCCAGGAAGAGTCCTGG
ACCTGGCCAGCAAAGGGGTTGCTGACCTTTCCGAGTGTCCTACCTTTGTT
ATGGACGAGGCTGATAAATTGCTGTCACCTGAATTCACGCCAGTCATCGA
GCAACTACTATCATTCCATCCTAAAGACCGCCAGGTTATGCTTTTCAGCG
CCACCTTTCCACTTATTGTGAAGTCATTCAAGGACAAACACATGCGCAAT
CCTTACGAGATCAATCTCATGGATGAGCTCACTCTCCGCGGTATTACGCA
GTATTATGCTTTTGTTGAGGAAAAGCAGAAGGTCCACTGCTTGAACACAC
TCTTCTCCAAGTTACAAATCAATCAATCTATAATCTTCTGCAATTCTACT
AACCGAGTCGAGTTGCTCGCGAAGAAGATAACGGAATTGGGTTATTCTTG
CTTCTATTCCCATGCCAGAATGCTTCAGCAGCATCGCAACCGGGTGTTCC
ACGATTTCAGGAATGGCGTTTGCCGGAACCTTGTTTGCTCGGATTTGTTA
ACTCGAGGTATTGATATTCAAGCCGTCAATGTTGTCATAAATTTTGATTT
TCCGAAGAACGCCGAGACTTATCTGCACCGAATTGGTCGCTCTGGTCGCT
TTGGACATCTTGGTCTTGCTATCAACCTTATCAATTGGGAAGACCGGTTC
AATTTATATAAGATTGAGCAGGAACTTGGAACTGAGATCCAGCCGATTCC
GCAAAACATCGACAAGAAGCTTTATGTCTACGACTCACCGGACACAATTC
CACGCCCTATTGCCAACCCATCCCAGCCTCAGATTACTGCTCAAGCCGCG
AATGCAAACATTGGTGAGCGTCGTCACAATCACCATATGAATGGCGGGCA
GTACCAGTACGGTAGGGGCCGGGGCTCTTATCGCGGAGGTCGTGGACAAG
GCCAGCGTCGCAATATGCAGAACGAAACCAAGTTTGGCACTCAAGGACAG
TCAAGCGGCAAGTCCCACCCGACGCAAGTGTCATAGATGACCGACGCCTT
AGCCTCTCAGCTGAATAACACTACTTTAGGGGATGCGAGCTCAGACGCGA
AGTGGAAGGAGCAATTGAATGTCCCTGCCAAAGATGCAAGACCACAAACT
GAGGATGTGACTGCTACGAAAGGCTTGGAATTCGAAGACTTCTATATCAA
ACGCGAACTGATGATGGGTATATTCGAAGCTGGGTTCGAAAAGCCTTCTC
CAATTCAGGAAGAGACGATACCAGTTGCTCTTACAGGCAGGGATATCTTG
GCGCGAGCCAAGAATGGCACAGGAAAAACAGCAGCTTTCGTTATCCCTAC
CTTGGAGCGCATCAATCCTAAAAGCACCAAGACACAAGCCCTTATCCTTG
TTCCTACGAGAGAGCTGGCGCTCCAAACGTCACATGTCTGCAAAACCTTG
GGAAAGCATCTTGGTATCAATGTCATGGTCACCACAGGAGGTACTGGCTT
GATGGATGACATCATTCGGCTGAACGACGCAGTCCATATTCTCGTTGGGA
CCCCAGGAAGAGTCCTGGACCTGGCCAGCAAAGGGGTTGCTGACCTTTCC
GAGTGTCCTACCTTTGTTATGGACGAGGCTGATAAATTGCTGTCACCTGA
ATTCACGCCAGTCATCGAGCAACTACTATCATTCCATCCTAAAGACCGCC
AGGTTATGCTTTTCAGCGCCACCTTTCCACTTATTGTGAAGTCATTCAAG
GACAAACACATGCGCAATCCTTACGAGATCAATCTCATGGATGAGCTCAC
TCTCCGCGGTATTACGCAGTATTATGCTTTTGTTGAGGAAAAGCAGAAGG
TCCACTGCTTGAACACACTCTTCTCCAAGTTACAAATCAATCAATCTATA
ATCTTCTGCAATTCTACTAACCGAGTCGAGTTGCTCGCGAAGAAGATAAC
GGAATTGGGTTATTCTTGCTTCTATTCCCATGCCAGAATGCTTCAGCAGC
ATCGCAACCGGGTGTTCCACGATTTCAGGAATGGCGTTTGCCGGAACCTT
GTTTGCTCGGATTTGTTAACTCGAGGTATTGATATTCAAGCCGTCAATGT
TGTCATAAATTTTGATTTTCCGAAGAACGCCGAGACTTATCTGCACCGAA
TTGGTCGCTCTGGTCGCTTTGGACATCTTGGTCTTGCTATCAACCTTATC
AATTGGGAAGACCGGTTCAATTTATATAAGATTGAGCAGGAACTTGGAAC
TGAGATCCAGCCGATTCCGCAAAACATCGACAAGAAGCTTTATGTCTACG
ACTCACCGGACACAATTCCACGCCCTATTGCCAACCCATCCCAGCCTCAG
ATTACTGCTCAAGCCGCGAATGCAAACATTGGTGAGCGTCGTCACAATCA
CCATATGAATGGCGGGCAGTACCAGTACGGTAGGGGCCGGGGCTCTTATC
GCGGAGGTCGTGGACAAGGCCAGCGTCGCAATATGCAGAACGAAACCAAG
TTTGGCACTCAAGGACAGTCAAGCGGCAAGTCCCACCCGACGCAAGTGTC
ATAGATGACCGACGCCTTAGCCTCTCAGCTGAATAACACTACTTTAGGGG
ATGCGAGCTCAGACGCGAAGTGGAAGGAGCAATTGAATGTCCCTGCCAAA
GATGCAAGACCACAAACTGAGGATGTGACTGCTACGAAAGGCTTGGAATT
CGAAGACTTCTATATCAAACGCGAACTGATGATGGGTATATTCGAAGCTG
GGTTCGAAAAGCCTTCTCCAATTCAGGAAGAGACGATACCAGTTGCTCTT
ACAGGCAGGGATATCTTGGCGCGAGCCAAGAATGGCACAGGAAAAACAGC
AGCTTTCGTTATCCCTACCTTGGAGCGCATCAATCCTAAAAGCACCAAGA
CACAAGCCCTTATCCTTGTTCCTACGAGAGAGCTGGCGCTCCAAACGTCA
CATGTCTGCAAAACCTTGGGAAAGCATCTTGGTATCAATGTCATGGTCAC
CACAGGAGGTACTGGCTTGATGGATGACATCATTCGGCTGAACGACGCAG
TCCATATTCTCGTTGGGACCCCAGGAAGAGTCCTGGACCTGGCCAGCAAA
GGGGTTGCTGACCTTTCCGAGTGTCCTACCTTTGTTATGGACGAGGCTGA
TAAATTGCTGTCACCTGAATTCACGCCAGTCATCGAGCAACTACTATCAT
TCCATCCTAAAGACCGCCAGGTTATGCTTTTCAGCGCCACCTTTCCACTT
ATTGTGAAGTCATTCAAGGACAAACACATGCGCAATCCTTACGAGATCAA
TCTCATGGATGAGCTCACTCTCCGCGGTATTACGCAGTATTATGCTTTTG
TTGAGGAAAAGCAGAAGGTCCACTGCTTGAACACACTCTTCTCCAAGTTA
CAAATCAATCAATCTATAATCTTCTGCAATTCTACTAACCGAGTCGAGTT
GCTCGCGAAGAAGATAACGGAATTGGGTTATTCTTGCTTCTATTCCCATG
CCAGAATGCTTCAGCAGCATCGCAACCGGGTGTTCCACGATTTCAGGAAT
GGCGTTTGCCGGAACCTTGTTTGCTCGGATTTGTTAACTCGAGGTATTGA
TATTCAAGCCGTCAATGTTGTCATAAATTTTGATTTTCCGAAGAACGCCG
AGACTTATCTGCACCGAATTGGTCGCTCTGGTCGCTTTGGACATCTTGGT
CTTGCTATCAACCTTATCAATTGGGAAGACCGGTTCAATTTATATAAGAT
TGAGCAGGAACTTGGAACTGAGATCCAGCCGATTCCGCAAAACATCGACA
AGAAGCTTTATGTCTACGACTCACCGGACACAATTCCACGCCCTATTGCC
AACCCATCCCAGCCTCAGATTACTGCTCAAGCCGCGAATGCAAACATTGG
TGAGCGTCGTCACAATCACCATATGAATGGCGGGCAGTACCAGTACGGTA
GGGGCCGGGGCTCTTATCGCGGAGGTCGTGGACAAGGCCAGCGTCGCAAT
ATGCAGAACGAAACCAAGTTTGGCACTCAAGGACAGTCAAGCGGCAAGTC
CCACCCGACGCAAGTGTCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DHH1CAN33_26235Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26235-T1.exon1CAN33_26235-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_26235-T1.exon2CAN33_26235-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26235-T1.exon3CAN33_26235-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_26235-T1.exon4CAN33_26235-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26235-T1.cdsCAN33_26235-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26235-T1CAN33_26235-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductDExD/H-box ATP-dependent RNA helicase dhh1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2776735..2778427 +
Powered by Drupal