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CAN33_26285-T1, CAN33_26285-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26285-T1
Unique NameCAN33_26285-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2794316..2795565-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26285-T1 ID=CAN33_26285-T1|Name=CAN33_26285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1250bp|location=Sequence derived from alignment at NKJJ01000002.1:2794316..2795565- (Aspergillus niger FDAARGOS_311)
ATGTCACTGATACCGGTGCCAGCCGACAAGAACAACACCCGAGAGAACGT
GATGGGAACGACCAACTATCGGAAACCATCAGAACATGCGTGGCCTGAGT
CGTTCCTGTTGGATTTCGAATCAAGAATCTGGATGACCTATCGGTCCAAT
TTCCCCCCTATACCTAGAGTCGAGGGAGACGACAAAAGTGCATCAATGAC
ACTGGGGGTACGCCTAAGAAGCCAATTAGTAGATACGCAAGGATTCACAT
CCGATACTGGCTGGGGCTGTATGATACGATCCGGTCAGAGCCTGCTGGCA
AATGCACTATCTATGTTGGTCCTAGGACGTGGTACTATCATTCACGCGCG
TGGCCTGAATGCACTGCTAACATTTGACCAGACTGGCGCCGTGGAGCAAG
GTTTGAGGAAGAATCACAGCTACTGTCTCTTTTTGCCGACACGCCAACTG
CCCCCTTCTCTGTACATCGGTTCGTAAAACATGGTGCCGAATCGTGCGGG
AAGTACCCTGGGGAATGGTTTGGGCCCTCCGCAACCGCCAAGTGCATAGA
GTAAGCTCCACATTACACCTAGCAACTATTATAAAAAGGTGAACTGAACA
ATAAAACAGAGCACTTTCGTCCCAGTGTGGAAATCCCACACTGAAAGTAT
ATGTCTCGAATGATACATCGGAAGTTTACCAGGACAAATTCATGGATATC
GCCCGAAACACATCCGGTGCTTTTCAGCCTACCCTGATACTTCTAGGGAC
AAGGCTCGGCATTGACAACATCACCCCAGTCTATTGGGATGGTCTAAAAG
CAGCGTTGCAGTTCCCTCAATCAGTCGGAATTGCAGGGTATATTGCCCAC
CCATGAGCCATTCCTCACCATTAAAGCTGACGTCATCACTAGGGGACGCC
CGTCGGCGTCACACTACTTTGTCGGAGCCCAGGGGTCGCATCTATTCTAT
CTAGATCCACATTATACCCGCCCTGCGCTTCCAGATCGTCAAGAAGGCGA
ACTATACTCAAAGGAGGAGGTTGATACTTATCATACACGGCGCTTGAGGA
GGATTCACGTGCGGGACATGGATCCGAGCATGCTTATAGGCTTCCTCATT
CGAAACCAGGAAGATTGGGCCGACTGGTTAAAGCGCATAGAAGCCGTCAA
GGGACGGCCGATTATCCATGTACTCAAGCAAATGAATCCTGACCACGACC
AGGAAGCGGGAGCACTTGACCAGGTTGAAGCACTGGATGATATCGAATAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2794316..2795565-

>CAN33_26285-T1 ID=CAN33_26285-T1|Name=CAN33_26285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4344bp|location=Sequence derived from alignment at NKJJ01000002.1:2794316..2795565- (Aspergillus niger FDAARGOS_311)
GGGACGCCCGTCGGCGTCACACTACTTTGTCGGAGCCCAGGGGTCGCATC
TATTCTATCTAGATCCACATTATACCCGCCCTGCGCTTCCAGATCGTCAA
GAAGGCGAACTATACTCAAAGGAGGAGGTTGATACTTATCATACACGGCG
CTTGAGGAGGATTCACGTGCGGGACATGGATCCGAGCATGCTTATAGGCT
TCCTCATTCGAAACCAGGAAGATTGGGCCGACTGGTTAAAGCGCATAGAA
GCCGTCAAGGGACGGCCGATTATCCATGTACTCAAGCAAATGAATCCTGA
CCACGACCAGGAAGCGGGAGCACTTGACCAGGTTGAAGCACTGGATGATA
TCGAATAGAGCACTTTCGTCCCAGTGTGGAAATCCCACACTGAAAGTATA
TGTCTCGAATGATACATCGGAAGTTTACCAGGACAAATTCATGGATATCG
CCCGAAACACATCCGGTGCTTTTCAGCCTACCCTGATACTTCTAGGGACA
AGGCTCGGCATTGACAACATCACCCCAGTCTATTGGGATGGTCTAAAAGC
AGCGTTGCAGTTCCCTCAATCAGTCGGAATTGCAGGACTGGCGCCGTGGA
GCAAGGTTTGAGGAAGAATCACAGCTACTGTCTCTTTTTGCCGACACGCC
AACTGCCCCCTTCTCTGTACATCGGTTCGTAAAACATGGTGCCGAATCGT
GCGGGAAGTACCCTGGGGAATGGTTTGGGCCCTCCGCAACCGCCAAGTGC
ATAGAATGTCACTGATACCGGTGCCAGCCGACAAGAACAACACCCGAGAG
AACGTGATGGGAACGACCAACTATCGGAAACCATCAGAACATGCGTGGCC
TGAGTCGTTCCTGTTGGATTTCGAATCAAGAATCTGGATGACCTATCGGT
CCAATTTCCCCCCTATACCTAGAGTCGAGGGAGACGACAAAAGTGCATCA
ATGACACTGGGGGTACGCCTAAGAAGCCAATTAGTAGATACGCAAGGATT
CACATCCGATACTGGCTGGGGCTGTATGATACGATCCGGTCAGAGCCTGC
TGGCAAATGCACTATCTATGTTGGTCCTAGGACGTGGGGACGCCCGTCGG
CGTCACACTACTTTGTCGGAGCCCAGGGGTCGCATCTATTCTATCTAGAT
CCACATTATACCCGCCCTGCGCTTCCAGATCGTCAAGAAGGCGAACTATA
CTCAAAGGAGGAGGTTGATACTTATCATACACGGCGCTTGAGGAGGATTC
ACGTGCGGGACATGGATCCGAGCATGCTTATAGGCTTCCTCATTCGAAAC
CAGGAAGATTGGGCCGACTGGTTAAAGCGCATAGAAGCCGTCAAGGGACG
GCCGATTATCCATGTACTCAAGCAAATGAATCCTGACCACGACCAGGAAG
CGGGAGCACTTGACCAGGTTGAAGCACTGGATGATATCGAATAGAGCACT
TTCGTCCCAGTGTGGAAATCCCACACTGAAAGTATATGTCTCGAATGATA
CATCGGAAGTTTACCAGGACAAATTCATGGATATCGCCCGAAACACATCC
GGTGCTTTTCAGCCTACCCTGATACTTCTAGGGACAAGGCTCGGCATTGA
CAACATCACCCCAGTCTATTGGGATGGTCTAAAAGCAGCGTTGCAGTTCC
CTCAATCAGTCGGAATTGCAGGACTGGCGCCGTGGAGCAAGGTTTGAGGA
AGAATCACAGCTACTGTCTCTTTTTGCCGACACGCCAACTGCCCCCTTCT
CTGTACATCGGTTCGTAAAACATGGTGCCGAATCGTGCGGGAAGTACCCT
GGGGAATGGTTTGGGCCCTCCGCAACCGCCAAGTGCATAGAATGTCACTG
ATACCGGTGCCAGCCGACAAGAACAACACCCGAGAGAACGTGATGGGAAC
GACCAACTATCGGAAACCATCAGAACATGCGTGGCCTGAGTCGTTCCTGT
TGGATTTCGAATCAAGAATCTGGATGACCTATCGGTCCAATTTCCCCCCT
ATACCTAGAGTCGAGGGAGACGACAAAAGTGCATCAATGACACTGGGGGT
ACGCCTAAGAAGCCAATTAGTAGATACGCAAGGATTCACATCCGATACTG
GCTGGGGCTGTATGATACGATCCGGTCAGAGCCTGCTGGCAAATGCACTA
TCTATGTTGGTCCTAGGACGTGGGGACGCCCGTCGGCGTCACACTACTTT
GTCGGAGCCCAGGGGTCGCATCTATTCTATCTAGATCCACATTATACCCG
CCCTGCGCTTCCAGATCGTCAAGAAGGCGAACTATACTCAAAGGAGGAGG
TTGATACTTATCATACACGGCGCTTGAGGAGGATTCACGTGCGGGACATG
GATCCGAGCATGCTTATAGGCTTCCTCATTCGAAACCAGGAAGATTGGGC
CGACTGGTTAAAGCGCATAGAAGCCGTCAAGGGACGGCCGATTATCCATG
TACTCAAGCAAATGAATCCTGACCACGACCAGGAAGCGGGAGCACTTGAC
CAGGTTGAAGCACTGGATGATATCGAATAGAGCACTTTCGTCCCAGTGTG
GAAATCCCACACTGAAAGTATATGTCTCGAATGATACATCGGAAGTTTAC
CAGGACAAATTCATGGATATCGCCCGAAACACATCCGGTGCTTTTCAGCC
TACCCTGATACTTCTAGGGACAAGGCTCGGCATTGACAACATCACCCCAG
TCTATTGGGATGGTCTAAAAGCAGCGTTGCAGTTCCCTCAATCAGTCGGA
ATTGCAGGACTGGCGCCGTGGAGCAAGGTTTGAGGAAGAATCACAGCTAC
TGTCTCTTTTTGCCGACACGCCAACTGCCCCCTTCTCTGTACATCGGTTC
GTAAAACATGGTGCCGAATCGTGCGGGAAGTACCCTGGGGAATGGTTTGG
GCCCTCCGCAACCGCCAAGTGCATAGAATGTCACTGATACCGGTGCCAGC
CGACAAGAACAACACCCGAGAGAACGTGATGGGAACGACCAACTATCGGA
AACCATCAGAACATGCGTGGCCTGAGTCGTTCCTGTTGGATTTCGAATCA
AGAATCTGGATGACCTATCGGTCCAATTTCCCCCCTATACCTAGAGTCGA
GGGAGACGACAAAAGTGCATCAATGACACTGGGGGTACGCCTAAGAAGCC
AATTAGTAGATACGCAAGGATTCACATCCGATACTGGCTGGGGCTGTATG
ATACGATCCGGTCAGAGCCTGCTGGCAAATGCACTATCTATGTTGGTCCT
AGGACGTGGGGACGCCCGTCGGCGTCACACTACTTTGTCGGAGCCCAGGG
GTCGCATCTATTCTATCTAGATCCACATTATACCCGCCCTGCGCTTCCAG
ATCGTCAAGAAGGCGAACTATACTCAAAGGAGGAGGTTGATACTTATCAT
ACACGGCGCTTGAGGAGGATTCACGTGCGGGACATGGATCCGAGCATGCT
TATAGGCTTCCTCATTCGAAACCAGGAAGATTGGGCCGACTGGTTAAAGC
GCATAGAAGCCGTCAAGGGACGGCCGATTATCCATGTACTCAAGCAAATG
AATCCTGACCACGACCAGGAAGCGGGAGCACTTGACCAGGTTGAAGCACT
GGATGATATCGAATAGAGCACTTTCGTCCCAGTGTGGAAATCCCACACTG
AAAGTATATGTCTCGAATGATACATCGGAAGTTTACCAGGACAAATTCAT
GGATATCGCCCGAAACACATCCGGTGCTTTTCAGCCTACCCTGATACTTC
TAGGGACAAGGCTCGGCATTGACAACATCACCCCAGTCTATTGGGATGGT
CTAAAAGCAGCGTTGCAGTTCCCTCAATCAGTCGGAATTGCAGGACTGGC
GCCGTGGAGCAAGGTTTGAGGAAGAATCACAGCTACTGTCTCTTTTTGCC
GACACGCCAACTGCCCCCTTCTCTGTACATCGGTTCGTAAAACATGGTGC
CGAATCGTGCGGGAAGTACCCTGGGGAATGGTTTGGGCCCTCCGCAACCG
CCAAGTGCATAGAATGTCACTGATACCGGTGCCAGCCGACAAGAACAACA
CCCGAGAGAACGTGATGGGAACGACCAACTATCGGAAACCATCAGAACAT
GCGTGGCCTGAGTCGTTCCTGTTGGATTTCGAATCAAGAATCTGGATGAC
CTATCGGTCCAATTTCCCCCCTATACCTAGAGTCGAGGGAGACGACAAAA
GTGCATCAATGACACTGGGGGTACGCCTAAGAAGCCAATTAGTAGATACG
CAAGGATTCACATCCGATACTGGCTGGGGCTGTATGATACGATCCGGTCA
GAGCCTGCTGGCAAATGCACTATCTATGTTGGTCCTAGGACGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG4CAN33_26285Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26285-T1CAN33_26285-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26285-T1.cdsCAN33_26285-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26285-T1.exon4CAN33_26285-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_26285-T1.exon3CAN33_26285-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_26285-T1.exon2CAN33_26285-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26285-T1.exon1CAN33_26285-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264B3O
NoteMEROPS:MER0013559
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR005078
DBxrefPFAM:PF03416
ProductCysteine protease atg4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2794316..2795565 -
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