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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1619049..1620077+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2630-T1 ID=CAN33_2630-T1|Name=CAN33_2630-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1029bp|location=Sequence derived from alignment at NKJJ01000004.1:1619049..1620077+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAGGGTCGCCCTCCCGCCAGCCGCGCCGTCACGGTCTCCAAAGC
ACTGAGCCTGCTTCTCCGTCACGCCGCCGAAAAAGAAGGCCTACCTATAG
ATGCGCAAGGCTACGCCAATGTGTCTGATGTGGTGCGTCCTATCCCAGCA
GAATCATAATCCAAGGATAACTCACCAACTAATATGGAATTTGGTATACA
GCTAGCGTGGCGCAAACTTAAATCCCTAAAAGTCACCTTCCCCGAGATCG
TCGACGCCGTCGCCAACTCCGATAAGAAGCGATTCGCGCTGCTATACACC
CCATCTACATCCCAACCTACCCCAACCGCTACAGAACCAACCCCTACAAC
TACATCTACAGACCCCACCACAGAAACCGAACCCGAAGTAAAAGAATCCA
CTGACACAACCACCACAACCACCGCCCTCGCTGCAACCACCACCGACACC
AACCCCACGCACTACCTCATCCGCGCAACGCAAGGCCACAGCATCAAGAC
CGTTGAAGCTGTGCACCTCCTCGAGAAACTCTCCCTCTCCGACAAAGACA
AACTTCCGCGCACTGTCGTCCACGGCACATTCCACTCCGCATGGCCGGCC
ATCTTCTCCTCCGGCGGACTACGCTGCATGGGCCGCAACCAGGTACATTT
TGCGACAGGGCCAGCAGTGGAAGATGTGTTGGCGGGAAATGCGGTGGCCT
CGCCGGAACAGGTAATTTCGGGGATGCGGAGGGATGCGCAGGTGCTGATT
TATGTGGATTTGGAGAAGGCGTTGAATGCGGGATGTCCGTTTTGGAGGAG
TGAGAATGGGGTGATTCTTAGTGAGGGGATCAGCATAAATCAGAATGAGG
ATGGGAAAGAGGGGGGGAAGGAAGAGAAGGTAGTGCCGTTGGAGTTTGTG
GATGTGGTGGTGGAGCGCAAGATGGGCAAGATTTGGGAACGCGGACAGGT
GGTGCAGGAGTGGCCGTCGGAATGGGCGCAAAAGGGGACTAGACAGAAGG
GGGGTCCGACGGGAAGGAATCGTACTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1619049..1620077+ >CAN33_2630-T1 ID=CAN33_2630-T1|Name=CAN33_2630-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2547bp|location=Sequence derived from alignment at NKJJ01000004.1:1619049..1620077+ (Aspergillus niger FDAARGOS_311)
ATGCCTAAGGGTCGCCCTCCCGCCAGCCGCGCCGTCACGGTCTCCAAAGC
ACTGAGCCTGCTTCTCCGTCACGCCGCCGAAAAAGAAGGCCTACCTATAG
ATGCGCAAGGCTACGCCAATGTGTCTGATGTGCTAGCGTGGCGCAAACTT
AAATCCCTAAAAGTCACCTTCCCCGAGATCGTCGACGCCGTCGCCAACTC
CGATAAGAAGCGATTCGCGCTGCTATACACCCCATCTACATCCCAACCTA
CCCCAACCGCTACAGAACCAACCCCTACAACTACATCTACAGACCCCACC
ACAGAAACCGAACCCGAAACCGTTGAAGCTGTGCACCTCCTCGAGAAACT
CTCCCTCTCCGACAAAGACAAACTTCCGCGCACTGTCGTCCACGGCACAT
TCCACTCCGCATGGCCGGCCATCTTCTCCTCCGGCGGACTACGCTGCATG
GGCCGCAACCAGGTACATTTTGCGACAGGGCCAGCAGTGGAAGATGTGTT
GGCGGGAAATGCGGTGGCCTCGCCGGAACAGGTAATTTCGGGGATGCGGA
GGGATGCGCAGGTGCTGATTTATGTGGATTTGGAGAAGGCGTTGAATGCG
GGATGTCCGTTTTGGAGGAGTGAGAATGGGGTGATTCTTAGTGAGGGGAT
CAGCATAAATCAGAATGAGGATGGGAAAGAGGGGGGGAAGGAAGAGAAGG
TAGTGCCGTTGGAGTTTGTGGATGTGGTGGTGGAGCGCAAGATGGGCAAG
ATTTGGGAACGCGGACAGGTGGTGCAGGAGTGGCCGTCGGAATGGGCGCA
AAAGGGGACTAGACAGAAGGGGGGTCCGACGGGAAGGAATCGTACTTGAA
TGCCTAAGGGTCGCCCTCCCGCCAGCCGCGCCGTCACGGTCTCCAAAGCA
CTGAGCCTGCTTCTCCGTCACGCCGCCGAAAAAGAAGGCCTACCTATAGA
TGCGCAAGGCTACGCCAATGTGTCTGATGTGCTAGCGTGGCGCAAACTTA
AATCCCTAAAAGTCACCTTCCCCGAGATCGTCGACGCCGTCGCCAACTCC
GATAAGAAGCGATTCGCGCTGCTATACACCCCATCTACATCCCAACCTAC
CCCAACCGCTACAGAACCAACCCCTACAACTACATCTACAGACCCCACCA
CAGAAACCGAACCCGAAACCGTTGAAGCTGTGCACCTCCTCGAGAAACTC
TCCCTCTCCGACAAAGACAAACTTCCGCGCACTGTCGTCCACGGCACATT
CCACTCCGCATGGCCGGCCATCTTCTCCTCCGGCGGACTACGCTGCATGG
GCCGCAACCAGGTACATTTTGCGACAGGGCCAGCAGTGGAAGATGTGTTG
GCGGGAAATGCGGTGGCCTCGCCGGAACAGGTAATTTCGGGGATGCGGAG
GGATGCGCAGGTGCTGATTTATGTGGATTTGGAGAAGGCGTTGAATGCGG
GATGTCCGTTTTGGAGGAGTGAGAATGGGGTGATTCTTAGTGAGGGGATC
AGCATAAATCAGAATGAGGATGGGAAAGAGGGGGGGAAGGAAGAGAAGGT
AGTGCCGTTGGAGTTTGTGGATGTGGTGGTGGAGCGCAAGATGGGCAAGA
TTTGGGAACGCGGACAGGTGGTGCAGGAGTGGCCGTCGGAATGGGCGCAA
AAGGGGACTAGACAGAAGGGGGGTCCGACGGGAAGGAATCGTACTTGAAT
GCCTAAGGGTCGCCCTCCCGCCAGCCGCGCCGTCACGGTCTCCAAAGCAC
TGAGCCTGCTTCTCCGTCACGCCGCCGAAAAAGAAGGCCTACCTATAGAT
GCGCAAGGCTACGCCAATGTGTCTGATGTGCTAGCGTGGCGCAAACTTAA
ATCCCTAAAAGTCACCTTCCCCGAGATCGTCGACGCCGTCGCCAACTCCG
ATAAGAAGCGATTCGCGCTGCTATACACCCCATCTACATCCCAACCTACC
CCAACCGCTACAGAACCAACCCCTACAACTACATCTACAGACCCCACCAC
AGAAACCGAACCCGAAACCGTTGAAGCTGTGCACCTCCTCGAGAAACTCT
CCCTCTCCGACAAAGACAAACTTCCGCGCACTGTCGTCCACGGCACATTC
CACTCCGCATGGCCGGCCATCTTCTCCTCCGGCGGACTACGCTGCATGGG
CCGCAACCAGGTACATTTTGCGACAGGGCCAGCAGTGGAAGATGTGTTGG
CGGGAAATGCGGTGGCCTCGCCGGAACAGGTAATTTCGGGGATGCGGAGG
GATGCGCAGGTGCTGATTTATGTGGATTTGGAGAAGGCGTTGAATGCGGG
ATGTCCGTTTTGGAGGAGTGAGAATGGGGTGATTCTTAGTGAGGGGATCA
GCATAAATCAGAATGAGGATGGGAAAGAGGGGGGGAAGGAAGAGAAGGTA
GTGCCGTTGGAGTTTGTGGATGTGGTGGTGGAGCGCAAGATGGGCAAGAT
TTGGGAACGCGGACAGGTGGTGCAGGAGTGGCCGTCGGAATGGGCGCAAA
AGGGGACTAGACAGAAGGGGGGTCCGACGGGAAGGAATCGTACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002745 |
| DBxref | InterPro:IPR042080 |
| DBxref | PFAM:PF01885 |
| Product | RNA 2'-phosphotransferase Tpt1 / KptA family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1619049..1620077 + |
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