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CAN33_26300-T1, CAN33_26300-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26300-T1
Unique NameCAN33_26300-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:2802035..2802970+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26300-T1 ID=CAN33_26300-T1|Name=CAN33_26300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=936bp|location=Sequence derived from alignment at NKJJ01000002.1:2802035..2802970+ (Aspergillus niger FDAARGOS_311)
ATGCCGCCCATCGGCTATGATATTGACGATAATGTAATTGAAGACGGGAC
ACGGGGCAGCCCAATCTATATGGATCCGTTCCGCTCAGAGAAGGAAACAC
CAATCACGGATCTAGAGTATCAACTGAACTTCTTAGGTGTCACTGCGGTC
GAGCGAGCGAACTTCTTGGCCGAATCCCACCCTTCAGAGGTCGTCCTTCG
GTGCAGCAAGAATATTCTGAACTCGGTCCAACGCATGACTCGGTTTCCTG
ATATGCGCCTATCACCAGTGGAGGTGGTTTGTGCGAAGTATGCTGCCATT
TGGTCCTCTTTGTTGCTTTCGGATCTTGCCCGGCCCACCGACATCAGACA
TAATCTCCTATGGCTAATGGAACTTTTTGCGTCTGAATTTCCATCCGATA
TCCACCTGATTGAACAGTATGTGGCGCCTCTGCTTCATGGGACGCCCGAG
TATGAGCATATTCTGGAAAGCCTCCATGTCATGCGTGCGGCGGATGAAAT
ACCTAAACAGGTAAAGAGGCGCTCTTCCCAGCGGAGGCAAGTAAAATACT
GCGTTGGGCAGGTATTCAGGCATCGCCGGTATGATTACCGAGCCATCATA
ACAGGTTGGGACACGGAGTGCGGCGCGGGTGAACAATGGATGAGAAGGAT
GGGAATAGATCGCTTACAGGGTGGTAGGCACCAGAGCTTCTATCATGTGC
TGTAAGCTCCTTTACGGGTATCGATCTTATTTACAAGGTGAAGCTAACTC
CTGCTCCCAAGAGTCGAGGATAAAAGTGTTCGTTATGTGGCTGAGGAGAA
TATTGAGCCGATGGATCCCGAGCTCTCAGAATTGCCCTCGTCACTCGTGG
CAGTGGCGGGGAAGCACTTCAAACGATGGGATGAGGAAACGAGGACATTT
GTCAGTAACATTAGGGATGAATATCCTGAGGACTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:2802035..2802970+

>CAN33_26300-T1 ID=CAN33_26300-T1|Name=CAN33_26300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2475bp|location=Sequence derived from alignment at NKJJ01000002.1:2802035..2802970+ (Aspergillus niger FDAARGOS_311)
ATGCCGCCCATCGGCTATGATATTGACGATAATGTAATTGAAGACGGGAC
ACGGGGCAGCCCAATCTATATGGATCCGTTCCGCTCAGAGAAGGAAACAC
CAATCACGGATCTAGAGTATCAACTGAACTTCTTAGGTGTCACTGCGGTC
GAGCGAGCGAACTTCTTGGCCGAATCCCACCCTTCAGAGGTCGTCCTTCG
GTGCAGCAAGAATATTCTGAACTCGGTCCAACGCATGACTCGGTTTCCTG
ATATGCGCCTATCACCAGTGGAGGTGGTTTGTGCGAAGTATGCTGCCATT
TGGTCCTCTTTGTTGCTTTCGGATCTTGCCCGGCCCACCGACATCAGACA
TAATCTCCTATGGCTAATGGAACTTTTTGCGTCTGAATTTCCATCCGATA
TCCACCTGATTGAACAGTATGTGGCGCCTCTGCTTCATGGGACGCCCGAG
TATGAGCATATTCTGGAAAGCCTCCATGTCATGCGTGCGGCGGATGAAAT
ACCTAAACAGGTATTCAGGCATCGCCGGTATGATTACCGAGCCATCATAA
CAGGTTGGGACACGGAGTGCGGCGCGGGTGAACAATGGATGAGAAGGATG
GGAATAGATCGCTTACAGGGTGGTAGGCACCAGAGCTTCTATCATGTGCT
AGTCGAGGATAAAAGTGTTCGTTATGTGGCTGAGGAGAATATTGAGCCGA
TGGATCCCGAGCTCTCAGAATTGCCCTCGTCACTCGTGGCAGTGGCGGGG
AAGCACTTCAAACGATGGGATGAGGAAACGAGGACATTTGTCAGTAACAT
TAGGGATGAATATCCTGAGGACTGAATGCCGCCCATCGGCTATGATATTG
ACGATAATGTAATTGAAGACGGGACACGGGGCAGCCCAATCTATATGGAT
CCGTTCCGCTCAGAGAAGGAAACACCAATCACGGATCTAGAGTATCAACT
GAACTTCTTAGGTGTCACTGCGGTCGAGCGAGCGAACTTCTTGGCCGAAT
CCCACCCTTCAGAGGTCGTCCTTCGGTGCAGCAAGAATATTCTGAACTCG
GTCCAACGCATGACTCGGTTTCCTGATATGCGCCTATCACCAGTGGAGGT
GGTTTGTGCGAAGTATGCTGCCATTTGGTCCTCTTTGTTGCTTTCGGATC
TTGCCCGGCCCACCGACATCAGACATAATCTCCTATGGCTAATGGAACTT
TTTGCGTCTGAATTTCCATCCGATATCCACCTGATTGAACAGTATGTGGC
GCCTCTGCTTCATGGGACGCCCGAGTATGAGCATATTCTGGAAAGCCTCC
ATGTCATGCGTGCGGCGGATGAAATACCTAAACAGGTATTCAGGCATCGC
CGGTATGATTACCGAGCCATCATAACAGGTTGGGACACGGAGTGCGGCGC
GGGTGAACAATGGATGAGAAGGATGGGAATAGATCGCTTACAGGGTGGTA
GGCACCAGAGCTTCTATCATGTGCTAGTCGAGGATAAAAGTGTTCGTTAT
GTGGCTGAGGAGAATATTGAGCCGATGGATCCCGAGCTCTCAGAATTGCC
CTCGTCACTCGTGGCAGTGGCGGGGAAGCACTTCAAACGATGGGATGAGG
AAACGAGGACATTTGTCAGTAACATTAGGGATGAATATCCTGAGGACTGA
ATGCCGCCCATCGGCTATGATATTGACGATAATGTAATTGAAGACGGGAC
ACGGGGCAGCCCAATCTATATGGATCCGTTCCGCTCAGAGAAGGAAACAC
CAATCACGGATCTAGAGTATCAACTGAACTTCTTAGGTGTCACTGCGGTC
GAGCGAGCGAACTTCTTGGCCGAATCCCACCCTTCAGAGGTCGTCCTTCG
GTGCAGCAAGAATATTCTGAACTCGGTCCAACGCATGACTCGGTTTCCTG
ATATGCGCCTATCACCAGTGGAGGTGGTTTGTGCGAAGTATGCTGCCATT
TGGTCCTCTTTGTTGCTTTCGGATCTTGCCCGGCCCACCGACATCAGACA
TAATCTCCTATGGCTAATGGAACTTTTTGCGTCTGAATTTCCATCCGATA
TCCACCTGATTGAACAGTATGTGGCGCCTCTGCTTCATGGGACGCCCGAG
TATGAGCATATTCTGGAAAGCCTCCATGTCATGCGTGCGGCGGATGAAAT
ACCTAAACAGGTATTCAGGCATCGCCGGTATGATTACCGAGCCATCATAA
CAGGTTGGGACACGGAGTGCGGCGCGGGTGAACAATGGATGAGAAGGATG
GGAATAGATCGCTTACAGGGTGGTAGGCACCAGAGCTTCTATCATGTGCT
AGTCGAGGATAAAAGTGTTCGTTATGTGGCTGAGGAGAATATTGAGCCGA
TGGATCCCGAGCTCTCAGAATTGCCCTCGTCACTCGTGGCAGTGGCGGGG
AAGCACTTCAAACGATGGGATGAGGAAACGAGGACATTTGTCAGTAACAT
TAGGGATGAATATCCTGAGGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26300CAN33_26300Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26300-T1.exon1CAN33_26300-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_26300-T1.exon2CAN33_26300-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26300-T1.exon3CAN33_26300-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26300-T1.cdsCAN33_26300-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26300-T1CAN33_26300-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036623
DBxrefInterPro:IPR011722
DBxrefPFAM:PF08755
ProductHemimethylated DNA-binding protein YccV like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:2802035..2802970 +
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