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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2972607..2973369- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26385-T1 ID=CAN33_26385-T1|Name=CAN33_26385-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=763bp|location=Sequence derived from alignment at NKJJ01000002.1:2972607..2973369- (Aspergillus niger FDAARGOS_311)
ATGTCCACCGGTCTTGACATCGTCCACACTGCTGGCGCCGCCCAGCGTAA
GTGCTTCCTCCTTCCCCTCCCACCTTATGCCATTGCATGAGATGCAGTGG
CATTCATTACCCCTCTTCCATGTTTCTGGTGTTCTTGTCCCAGATAGAAA
GGACACTCCCCAAGAAACAAACCGCCATTACCACCCCTAAGAGAATCCAA
GCTAACAGCAATTGAACCAACTATAGCCGTCGGCCCCTACGTAAGAGAAA
TCCAACCCCGCCATCCTTTCCTCAAGGCTTCCCCTCACCCACCACCATGA
CCACCATGACCACCACCACCACAAGCGCACACTAACATGATACAAATAAT
AAAAGTCTCAAGCCATCAAAGTCAACGGCCAAATCTTCCTCTCCGGTCAA
ATCCCCTTACCAAGGACGGCGTTCTGATTGAGGGTTCCGTCACGGAGAAG
ACCCGTCTCTGCTGCGAGAACATCAAGGCTGTTGTCGAGGAGGCTGGCTC
TAGCGTGGAGAAGATCTTCAAGGTTACGGTGCGTATATATACCCTTCCTT
CCTTCCTCCGTTTGTGGGAACGGAATGAATGAATGATTGGGCTGATGTTT
CGGGTATTGCGAACAGGTCCTCCTCGCTGATATGGCCGACTTCGATGAGA
TGAACAAGGAATACGCCAAGTTCTTTGCTCACAAGCCTGCTCGCTCTTGC
TTTGCTGTTAAGCAGCTGCCTAAGGGTGTGCCTGTTGAGATTGAGTGTAT
TGCTCTTGCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2972607..2973369- >CAN33_26385-T1 ID=CAN33_26385-T1|Name=CAN33_26385-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1098bp|location=Sequence derived from alignment at NKJJ01000002.1:2972607..2973369- (Aspergillus niger FDAARGOS_311)
GTCCTCCTCGCTGATATGGCCGACTTCGATGAGATGAACAAGGAATACGC
CAAGTTCTTTGCTCACAAGCCTGCTCGCTCTTGCTTTGCTGTTAAGCAGC
TGCCTAAGGGTGTGCCTGTTGAGATTGAGTGTATTGCTCTTGCTTAGTCT
CAAGCCATCAAAGTCAACGGCCAAATCTTCCTCTCCGGTCAAATCCCCTT
ACCAAGGACGGCGTTCTGATTGAGGGTTCCGTCACGGAGAAGACCCGTCT
CTGCTGCGAGAACATCAAGGCTGTTGTCGAGGAGGCTGGCTCTAGCGTGG
AGAAGATCTTCAAGGTTACGATGTCCACCGGTCTTGACATCGTCCACACT
GCTGGCGCCGCCCAGCGTCCTCCTCGCTGATATGGCCGACTTCGATGAGA
TGAACAAGGAATACGCCAAGTTCTTTGCTCACAAGCCTGCTCGCTCTTGC
TTTGCTGTTAAGCAGCTGCCTAAGGGTGTGCCTGTTGAGATTGAGTGTAT
TGCTCTTGCTTAGTCTCAAGCCATCAAAGTCAACGGCCAAATCTTCCTCT
CCGGTCAAATCCCCTTACCAAGGACGGCGTTCTGATTGAGGGTTCCGTCA
CGGAGAAGACCCGTCTCTGCTGCGAGAACATCAAGGCTGTTGTCGAGGAG
GCTGGCTCTAGCGTGGAGAAGATCTTCAAGGTTACGATGTCCACCGGTCT
TGACATCGTCCACACTGCTGGCGCCGCCCAGCGTCCTCCTCGCTGATATG
GCCGACTTCGATGAGATGAACAAGGAATACGCCAAGTTCTTTGCTCACAA
GCCTGCTCGCTCTTGCTTTGCTGTTAAGCAGCTGCCTAAGGGTGTGCCTG
TTGAGATTGAGTGTATTGCTCTTGCTTAGTCTCAAGCCATCAAAGTCAAC
GGCCAAATCTTCCTCTCCGGTCAAATCCCCTTACCAAGGACGGCGTTCTG
ATTGAGGGTTCCGTCACGGAGAAGACCCGTCTCTGCTGCGAGAACATCAA
GGCTGTTGTCGAGGAGGCTGGCTCTAGCGTGGAGAAGATCTTCAAGGTTA
CGATGTCCACCGGTCTTGACATCGTCCACACTGCTGGCGCCGCCCAGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019897 |
| DBxref | InterPro:IPR035959 |
| DBxref | InterPro:IPR006175 |
| DBxref | PFAM:PF01042 |
| Product | Endoribonuclease L-PSP family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2972607..2973369 - |
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