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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2992679..2993584+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26420-T1 ID=CAN33_26420-T1|Name=CAN33_26420-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=906bp|location=Sequence derived from alignment at NKJJ01000002.1:2992679..2993584+ (Aspergillus niger FDAARGOS_311)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGTAAGTTGTTCA
TTCGCTTCACTTGACCAGTAACCCCTTACTAACCTCCTGACCTTGACAGG
CTGTGGAAGTCAGTAAGCTGCATGCGTATAGTTGGCGCTCGAACACCCCT
CAGGAGACGAGCGAAGCCGGCTTGGGATGGACAGGCAACTGACATACACC
CGACATTACTAGGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACAT
TAACTTACGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAAT
TACCAAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAAT
GCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTA
ATTTCCGGGAAACGGCGGATATGATCGCAAAGGTATGTTGAGGCCAACAG
GTGGAGTAATTGGTCGAAAGTATATGGGCTTCTGTGGGCTGACGAGTTTA
ATGCCCACTGCAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCG
TCACCAACTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAA
AACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGA
TGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGG
AGATGGTAAGACGGCGTACTGCAGGGAGTTGATCTGTTCTCTGCTAGCCA
CTTCCATGCATGTATTTGTGCTAATTCTGGGAACAGGTGCAAATGCAGAT
CGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGAAA
TGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGATGAG
GAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2992679..2993584+ >CAN33_26420-T1 ID=CAN33_26420-T1|Name=CAN33_26420-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2895bp|location=Sequence derived from alignment at NKJJ01000002.1:2992679..2993584+ (Aspergillus niger FDAARGOS_311)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGCTGTGGAAGAC
GAGAGTTGACAAAGTGAACGCCGAGTTGGTAACATTAACTTACGGTACAA
TTGTCGCGCAACTTTGCCAGGACTACGATGGAAATTACCAAGAAGTGAAC
AAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGACTTATCGAGGA
CTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACGG
CGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCC
ACCGTCACCAACTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGA
AGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTC
AAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCA
TTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTTT
GCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATTG
AGGATGAGATGCCACCCGATGAGGAGTAAATGTCATCTGCAACAAAAGCA
TCTAGGATTGGGGAAGAGCTGTGGAAGACGAGAGTTGACAAAGTGAACGC
CGAGTTGGTAACATTAACTTACGGTACAATTGTCGCGCAACTTTGCCAGG
ACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTGGAGAAGATGGGT
TACAATATTGGAATGCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGT
CGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGATCGCAAAGGTTG
GGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACCAACTGGACGAGT
GACAACAACCAATTCTCTCTCATATTTGAAGAAAACCCGTTGGCAGATTT
TGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGCTGTGGTTTTCCA
ATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATGGTGCAAATGCAG
ATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGA
AATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGATG
AGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGCTG
TGGAAGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACATTAACTTA
CGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAATTACCAAG
AAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGACTT
ATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTTCCG
GGAAACGGCGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCAACA
TCGCACCCACCGTCACCAACTGGACGAGTGACAACAACCAATTCTCTCTC
ATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGG
ACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGC
GGGGTGCATTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTGAGC
GACGTTTTGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGTACG
GTACATTGAGGATGAGATGCCACCCGATGAGGAGTAAATGTCATCTGCAA
CAAAAGCATCTAGGATTGGGGAAGAGCTGTGGAAGACGAGAGTTGACAAA
GTGAACGCCGAGTTGGTAACATTAACTTACGGTACAATTGTCGCGCAACT
TTGCCAGGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTGGAGA
AGATGGGTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGCCAAG
TCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGATCGC
AAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACCAACT
GGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCCGTTG
GCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGCTGTG
GTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATGGTGC
AAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGAC
ACAACGGAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCC
ACCCGATGAGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATTGGGG
AAGAGCTGTGGAAGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACA
TTAACTTACGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAA
TTACCAAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAA
TGCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCT
AATTTCCGGGAAACGGCGGATATGATCGCAAAGGTTGGGTTCAGGATCTT
CCTCAACATCGCACCCACCGTCACCAACTGGACGAGTGACAACAACCAAT
TCTCTCTCATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCC
GATGACGGACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGG
AGTTCTGCGGGGTGCATTGGAGATGGTGCAAATGCAGATCGAGGCGCATT
TTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGAAATGCGGGTGTCA
CTTGTACGGTACATTGAGGATGAGATGCCACCCGATGAGGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030008 | TRAPP complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0048193 | Golgi vesicle transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264OM7 |
| DBxref | InterPro:IPR024096 |
| DBxref | InterPro:IPR007194 |
| DBxref | InterPro:IPR016721 |
| DBxref | PFAM:PF04051 |
| Product | Transport protein particle (TRAPP) component family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2992679..2993584 + |
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