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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3070844..3071569+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26550-T1 ID=CAN33_26550-T1|Name=CAN33_26550-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=726bp|location=Sequence derived from alignment at NKJJ01000002.1:3070844..3071569+ (Aspergillus niger FDAARGOS_311)
ATGCAGAGCACCTTGCTGCTGGTTGCACCGGCTCTCTTCGCTGCGAGCAT
ATACATGGAGTTGTGTCAGATCATTGCCCTCGTGAAATGGGGAGAGTTGG
CAATCATCCGGGTGGGCTGGATGACCAACATATTTGTTGCCGGAGATATG
CTCAGCTTCTTGATGCAAGTGTCGGGTGAGTGCGTGCTGTGCCTAGGTGA
TGTTGTGTGATGTGCTAATGTGGATACAGGGGCGGGAATCATGGTCAATG
GCTCCCGGAGTATGGGACAACAAATCATCGTGGGTGGTCTGATCGTGCAG
ATTGCTTTCTTCAGTTTCTTTGTCGTGAGCGCGCTGGTTGTCCTGGCTTG
CATAGCAAGTCGGCCAGCTGAGGAGTCGCGGTATCCCTTGATTCCCTGGA
GGAAGCATATGTTCGCCTTGTACAGCTCGCGTGTTCTAATCATCGTCCGA
TCGGTCTGTCGTGTAGTCGAGTATATAGAGGGCTCGGATGGGTTCCTCCT
GCAGCATGAAGTGTTCATTTACGTGCTGGACGGACTGCTGGCGTTGTCCG
TGTTGATCGTTTTCGCTGCTATCCATCCGAGAGAAGTGGAATGGCTTCTC
GAGCGCGGGAGCACCAAGACAGAAAAGGAAGGACGAATCAAAGGAGCCTA
TCTCTGTATAGTTGGAGCTGTCGTCGCTTGTAAATGTCCAGTTATTGAAT
CAATGAATCACGAAATGGTTTCCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3070844..3071569+ >CAN33_26550-T1 ID=CAN33_26550-T1|Name=CAN33_26550-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1344bp|location=Sequence derived from alignment at NKJJ01000002.1:3070844..3071569+ (Aspergillus niger FDAARGOS_311)
ATGCAGAGCACCTTGCTGCTGGTTGCACCGGCTCTCTTCGCTGCGAGCAT
ATACATGGAGTTGTGTCAGATCATTGCCCTCGTGAAATGGGGAGAGTTGG
CAATCATCCGGGTGGGCTGGATGACCAACATATTTGTTGCCGGAGATATG
CTCAGCTTCTTGATGCAAGTGTCGGGGGCGGGAATCATGGTCAATGGCTC
CCGGAGTATGGGACAACAAATCATCGTGGGTGGTCTGATCGTGCAGATTG
CTTTCTTCAGTTTCTTTGTCGTGAGCGCGCTGGTTGTCCTGGCTTGCATA
GCAAGTCGGCCAGCTGAGGAGTCGCGGTATCCCTTGATTCCCTGGAGGAA
GCATATGTTCGCCTTGTACAGCTCGCGTGTTCTAATCATCGTCCGATCGG
TCTGTCGTGTAGTCGAGTATATAGAGGGCTCGGATGGGTTCCTCCTGCAG
CATGAAGTGTTCATTTACGTGCTGGACGGACTGCTGGCGTTGTCCGTGTT
GATCGTTTTCGCTGCTATCCATCCGAGAGAAGTGGAATGGCTTCTCGAGC
GCGGGAGCACCAAGACAGAAAAGGAAGGACGAATCAAAGGAGCCTATCTC
TGTATAGTTGGAGCTGTCGTCGCTTGTAAATGTCCAGTTATTGAATCAAT
GAATCACGAAATGGTTTCCTGAATGCAGAGCACCTTGCTGCTGGTTGCAC
CGGCTCTCTTCGCTGCGAGCATATACATGGAGTTGTGTCAGATCATTGCC
CTCGTGAAATGGGGAGAGTTGGCAATCATCCGGGTGGGCTGGATGACCAA
CATATTTGTTGCCGGAGATATGCTCAGCTTCTTGATGCAAGTGTCGGGGG
CGGGAATCATGGTCAATGGCTCCCGGAGTATGGGACAACAAATCATCGTG
GGTGGTCTGATCGTGCAGATTGCTTTCTTCAGTTTCTTTGTCGTGAGCGC
GCTGGTTGTCCTGGCTTGCATAGCAAGTCGGCCAGCTGAGGAGTCGCGGT
ATCCCTTGATTCCCTGGAGGAAGCATATGTTCGCCTTGTACAGCTCGCGT
GTTCTAATCATCGTCCGATCGGTCTGTCGTGTAGTCGAGTATATAGAGGG
CTCGGATGGGTTCCTCCTGCAGCATGAAGTGTTCATTTACGTGCTGGACG
GACTGCTGGCGTTGTCCGTGTTGATCGTTTTCGCTGCTATCCATCCGAGA
GAAGTGGAATGGCTTCTCGAGCGCGGGAGCACCAAGACAGAAAAGGAAGG
ACGAATCAAAGGAGCCTATCTCTGTATAGTTGGAGCTGTCGTCGCTTGTA
AATGTCCAGTTATTGAATCAATGAATCACGAAATGGTTTCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3070844..3071569 + |
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