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CAN33_26605-T1, CAN33_26605-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26605-T1
Unique NameCAN33_26605-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3102455..3103591-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26605-T1 ID=CAN33_26605-T1|Name=CAN33_26605-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1137bp|location=Sequence derived from alignment at NKJJ01000002.1:3102455..3103591- (Aspergillus niger FDAARGOS_311)
ATGGCCTCCGCGGGGGCGTCAGGCAGTTCGGTCAACGAACTGGCCTCTCG
ACTTTACGACGCCTGTCTTAACCAGTTCCCTTCCGATCATCTGTTCTATC
AGCAAGATCTCCTGGGTCTGAACATTGTCCCCAAAAATGATCTCGCCCTT
CTCTTGAACTGCACCCAGTCGCTCGTCGACCAGAAGCTCTTTCGGCTCCT
CCAGGGCAAAAATGACCGCTTAGCCTGGAAGATTATTTCGCGCGATGATG
CTGAAAAGTAGGATTATTCTTCTACCTATGAAATCAACATAGGAACTCTC
ACCCACTAACCCACCCTGTTTAGACTTCGAGACCTAAGCCCCGACGAGAG
TTTGGTCTACAATGTCATCCATTCAACAGGACGGTCCGGTATTTGGGTCC
GCGCTATCGGCAACCGCACCAACCTTCACAAGTCCATACTCGATCGCTGC
CTCAAGTCGCTGGAATCGAGAAGCTACATCAAGAGCGTCCACAATGTCAA
ATTCCCCAGCCGGAAGATGTACATGCTGGCGAACCTCGCCCCAAGTGAAG
ACGTGACTGGTGGAGCCTGGTTTACCGACGGAGTTTTGGACGAGAACTTC
ATCAACAGCGTCGCCGGCTTTATCGAATACTCCGTGAGCCGGAAGAGCTG
GTACGAGGCCCCCTCCTCCTCGGACGGTCCTCGAAACAAGCGCATGAAGA
CCGCGGATGGAAGCCTAGCTGTCAAACAAGAGGGCGCTCCGAAGGAATAC
CTCCCCTTCCCAGCCGGGTATCAGGGCTACCCCACCATACCTATGCTGAC
AGCCGCCGTGAACGAGAGTGGCATCACACCGGTCCGTCTGGGCGAAGAGA
GCATCACGCAGCTCCTGGAGATGCTCTGCTACGACAACAAGCTAGTATCA
TTGAACAACGGCGAGTTCTACAAATCCGTCAAGAACCCCGAACAAGTCAA
GTCTCAACAAGCGCGCAAGCCCCGGACCGACGACGCAGGCATCGACGACA
GGCTAGTCAAGAACGGCATGACCGAAGCGCCCTGCGGCAACTGTCCGGTT
TTCAAGCTCTGCGCTCCCGGCGGGGCTGTCAGTCCCGAGAGTTGCGAATA
CTTTGACCCCTGGCTAGAAAAGGCCCTCGGATTCTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3102455..3103591-

>CAN33_26605-T1 ID=CAN33_26605-T1|Name=CAN33_26605-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2142bp|location=Sequence derived from alignment at NKJJ01000002.1:3102455..3103591- (Aspergillus niger FDAARGOS_311)
ACTTCGAGACCTAAGCCCCGACGAGAGTTTGGTCTACAATGTCATCCATT
CAACAGGACGGTCCGGTATTTGGGTCCGCGCTATCGGCAACCGCACCAAC
CTTCACAAGTCCATACTCGATCGCTGCCTCAAGTCGCTGGAATCGAGAAG
CTACATCAAGAGCGTCCACAATGTCAAATTCCCCAGCCGGAAGATGTACA
TGCTGGCGAACCTCGCCCCAAGTGAAGACGTGACTGGTGGAGCCTGGTTT
ACCGACGGAGTTTTGGACGAGAACTTCATCAACAGCGTCGCCGGCTTTAT
CGAATACTCCGTGAGCCGGAAGAGCTGGTACGAGGCCCCCTCCTCCTCGG
ACGGTCCTCGAAACAAGCGCATGAAGACCGCGGATGGAAGCCTAGCTGTC
AAACAAGAGGGCGCTCCGAAGGAATACCTCCCCTTCCCAGCCGGGTATCA
GGGCTACCCCACCATACCTATGCTGACAGCCGCCGTGAACGAGAGTGGCA
TCACACCGGTCCGTCTGGGCGAAGAGAGCATCACGCAGCTCCTGGAGATG
CTCTGCTACGACAACAAGCTAGTATCATTGAACAACGGCGAGTTCTACAA
ATCCGTCAAGAACCCCGAACAAGTCAAGTCTCAACAAGCGCGCAAGCCCC
GGACCGACGACGCAGGCATCGACGACAGGCTAGTCAAGAACGGCATGACC
GAAGCGCCCTGCGGCAACTGTCCGGTTTTCAAGCTCTGCGCTCCCGGCGG
GGCTGTCAGTCCCGAGAGTTGCGAATACTTTGACCCCTGGCTAGAAAAGG
CCCTCGGATTCTGAATGGCCTCCGCGGGGGCGTCAGGCAGTTCGGTCAAC
GAACTGGCCTCTCGACTTTACGACGCCTGTCTTAACCAGTTCCCTTCCGA
TCATCTGTTCTATCAGCAAGATCTCCTGGGTCTGAACATTGTCCCCAAAA
ATGATCTCGCCCTTCTCTTGAACTGCACCCAGTCGCTCGTCGACCAGAAG
CTCTTTCGGCTCCTCCAGGGCAAAAATGACCGCTTAGCCTGGAAGATTAT
TTCGCGCGATGATGCTGAAAAACTTCGAGACCTAAGCCCCGACGAGAGTT
TGGTCTACAATGTCATCCATTCAACAGGACGGTCCGGTATTTGGGTCCGC
GCTATCGGCAACCGCACCAACCTTCACAAGTCCATACTCGATCGCTGCCT
CAAGTCGCTGGAATCGAGAAGCTACATCAAGAGCGTCCACAATGTCAAAT
TCCCCAGCCGGAAGATGTACATGCTGGCGAACCTCGCCCCAAGTGAAGAC
GTGACTGGTGGAGCCTGGTTTACCGACGGAGTTTTGGACGAGAACTTCAT
CAACAGCGTCGCCGGCTTTATCGAATACTCCGTGAGCCGGAAGAGCTGGT
ACGAGGCCCCCTCCTCCTCGGACGGTCCTCGAAACAAGCGCATGAAGACC
GCGGATGGAAGCCTAGCTGTCAAACAAGAGGGCGCTCCGAAGGAATACCT
CCCCTTCCCAGCCGGGTATCAGGGCTACCCCACCATACCTATGCTGACAG
CCGCCGTGAACGAGAGTGGCATCACACCGGTCCGTCTGGGCGAAGAGAGC
ATCACGCAGCTCCTGGAGATGCTCTGCTACGACAACAAGCTAGTATCATT
GAACAACGGCGAGTTCTACAAATCCGTCAAGAACCCCGAACAAGTCAAGT
CTCAACAAGCGCGCAAGCCCCGGACCGACGACGCAGGCATCGACGACAGG
CTAGTCAAGAACGGCATGACCGAAGCGCCCTGCGGCAACTGTCCGGTTTT
CAAGCTCTGCGCTCCCGGCGGGGCTGTCAGTCCCGAGAGTTGCGAATACT
TTGACCCCTGGCTAGAAAAGGCCCTCGGATTCTGAATGGCCTCCGCGGGG
GCGTCAGGCAGTTCGGTCAACGAACTGGCCTCTCGACTTTACGACGCCTG
TCTTAACCAGTTCCCTTCCGATCATCTGTTCTATCAGCAAGATCTCCTGG
GTCTGAACATTGTCCCCAAAAATGATCTCGCCCTTCTCTTGAACTGCACC
CAGTCGCTCGTCGACCAGAAGCTCTTTCGGCTCCTCCAGGGCAAAAATGA
CCGCTTAGCCTGGAAGATTATTTCGCGCGATGATGCTGAAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005666RNA polymerase III complex
Vocabulary: Biological Process
TermDefinition
GO:0006383transcription by RNA polymerase III
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26605CAN33_26605Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26605-T1CAN33_26605-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26605-T1.cdsCAN33_26605-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26605-T1.exon2CAN33_26605-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26605-T1.exon1CAN33_26605-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092646WF
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR007832
DBxrefPFAM:PF05158
ProductRNA polymerase Rpc34 subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3102455..3103591 -
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