You are here

Home

CAN33_26650-T1, CAN33_26650-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26650-T1
Unique NameCAN33_26650-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3137763..3138632-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26650-T1 ID=CAN33_26650-T1|Name=CAN33_26650-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=870bp|location=Sequence derived from alignment at NKJJ01000002.1:3137763..3138632- (Aspergillus niger FDAARGOS_311)
ATGAGCGGACAAGATCCCAATAGCCAGTCCGAAGTCACCAAGCATGATAC
GGGTTGGCGGAGAGTAGTTCGCCATTTCACTCCATCGTACGCAGCACTCG
AACATGTCGCAAGTGGAAATGACTAACATGTCTGCACAGTTGGTTTTCGG
TTACCATGGGCACAGGCATTGTGTCTATTCTACTCAATACCCTTCCCTAC
AATGGCCAGTGGCTATACTGGATCTCTGTTGTCTGTTTTGCTTTTAATGT
CCTCCTCTTTGCCATAGGGTGTATCATCACCTTCCTTCGCTATACCCTAT
ATCCGGAAATCTTCTTCGCCATGATCAAGCATCCAGTCCAGTCCATGTTC
ATAGGAACATTTCCGATGGGATTCGCGACTATCATCAACATGTTCTGTTT
CGTCTGTGTTCCAGCCTGGGGTGACTGGACGCGCAATTTTGCCTGGGGCT
TGTGGATATTTGATGCAATCTTTTCAGTCATCACTGCCCTCTCTCTACCC
TTCTTACTGTGCGTCTGGCCCTGCACAGAGACTATGAAGCAATCATAAGC
TCGACTAACATGACTGCAGAATGGCCCATGGAAGCGAAATGCAACTCTCA
TCCATGACAGCTGTCTGGCTTCTTCCCATCGTCAGCTGCATTGTCGCAGC
TTCGTCAGGGGCCATCGTAGCGGATGTTCTCCCCGATCCGCAACACGCTC
TCTGGACCGTGCTCGTGAGCTACGTTCTCTGGGGCATCGGATTTCCTCTT
GCACTAATGGTAATGGTGATCTACCTACAACGACTGACCCTGCACAAATT
GCCTCCTAAAGCGGTGATTGTGAGCGTGTTCCTCCCCCTGGGACCACTTG
GTCAGGGCGGCTTCGGGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:3137763..3138632-

>CAN33_26650-T1 ID=CAN33_26650-T1|Name=CAN33_26650-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2268bp|location=Sequence derived from alignment at NKJJ01000002.1:3137763..3138632- (Aspergillus niger FDAARGOS_311)
AATGGCCCATGGAAGCGAAATGCAACTCTCATCCATGACAGCTGTCTGGC
TTCTTCCCATCGTCAGCTGCATTGTCGCAGCTTCGTCAGGGGCCATCGTA
GCGGATGTTCTCCCCGATCCGCAACACGCTCTCTGGACCGTGCTCGTGAG
CTACGTTCTCTGGGGCATCGGATTTCCTCTTGCACTAATGGTAATGGTGA
TCTACCTACAACGACTGACCCTGCACAAATTGCCTCCTAAAGCGGTGATT
GTGAGCGTGTTCCTCCCCCTGGGACCACTTGGTCAGGGCGGCTTCGGGTG
ATTGGTTTTCGGTTACCATGGGCACAGGCATTGTGTCTATTCTACTCAAT
ACCCTTCCCTACAATGGCCAGTGGCTATACTGGATCTCTGTTGTCTGTTT
TGCTTTTAATGTCCTCCTCTTTGCCATAGGGTGTATCATCACCTTCCTTC
GCTATACCCTATATCCGGAAATCTTCTTCGCCATGATCAAGCATCCAGTC
CAGTCCATGTTCATAGGAACATTTCCGATGGGATTCGCGACTATCATCAA
CATGTTCTGTTTCGTCTGTGTTCCAGCCTGGGGTGACTGGACGCGCAATT
TTGCCTGGGGCTTGTGGATATTTGATGCAATCTTTTCAGTCATCACTGCC
CTCTCTCTACCCTTCTTACTATGAGCGGACAAGATCCCAATAGCCAGTCC
GAAGTCACCAAGCATGATACGGGTTGGCGGAGAGTAGTTCGCCATTTCAC
TCCATCAATGGCCCATGGAAGCGAAATGCAACTCTCATCCATGACAGCTG
TCTGGCTTCTTCCCATCGTCAGCTGCATTGTCGCAGCTTCGTCAGGGGCC
ATCGTAGCGGATGTTCTCCCCGATCCGCAACACGCTCTCTGGACCGTGCT
CGTGAGCTACGTTCTCTGGGGCATCGGATTTCCTCTTGCACTAATGGTAA
TGGTGATCTACCTACAACGACTGACCCTGCACAAATTGCCTCCTAAAGCG
GTGATTGTGAGCGTGTTCCTCCCCCTGGGACCACTTGGTCAGGGCGGCTT
CGGGTGATTGGTTTTCGGTTACCATGGGCACAGGCATTGTGTCTATTCTA
CTCAATACCCTTCCCTACAATGGCCAGTGGCTATACTGGATCTCTGTTGT
CTGTTTTGCTTTTAATGTCCTCCTCTTTGCCATAGGGTGTATCATCACCT
TCCTTCGCTATACCCTATATCCGGAAATCTTCTTCGCCATGATCAAGCAT
CCAGTCCAGTCCATGTTCATAGGAACATTTCCGATGGGATTCGCGACTAT
CATCAACATGTTCTGTTTCGTCTGTGTTCCAGCCTGGGGTGACTGGACGC
GCAATTTTGCCTGGGGCTTGTGGATATTTGATGCAATCTTTTCAGTCATC
ACTGCCCTCTCTCTACCCTTCTTACTATGAGCGGACAAGATCCCAATAGC
CAGTCCGAAGTCACCAAGCATGATACGGGTTGGCGGAGAGTAGTTCGCCA
TTTCACTCCATCAATGGCCCATGGAAGCGAAATGCAACTCTCATCCATGA
CAGCTGTCTGGCTTCTTCCCATCGTCAGCTGCATTGTCGCAGCTTCGTCA
GGGGCCATCGTAGCGGATGTTCTCCCCGATCCGCAACACGCTCTCTGGAC
CGTGCTCGTGAGCTACGTTCTCTGGGGCATCGGATTTCCTCTTGCACTAA
TGGTAATGGTGATCTACCTACAACGACTGACCCTGCACAAATTGCCTCCT
AAAGCGGTGATTGTGAGCGTGTTCCTCCCCCTGGGACCACTTGGTCAGGG
CGGCTTCGGGTGATTGGTTTTCGGTTACCATGGGCACAGGCATTGTGTCT
ATTCTACTCAATACCCTTCCCTACAATGGCCAGTGGCTATACTGGATCTC
TGTTGTCTGTTTTGCTTTTAATGTCCTCCTCTTTGCCATAGGGTGTATCA
TCACCTTCCTTCGCTATACCCTATATCCGGAAATCTTCTTCGCCATGATC
AAGCATCCAGTCCAGTCCATGTTCATAGGAACATTTCCGATGGGATTCGC
GACTATCATCAACATGTTCTGTTTCGTCTGTGTTCCAGCCTGGGGTGACT
GGACGCGCAATTTTGCCTGGGGCTTGTGGATATTTGATGCAATCTTTTCA
GTCATCACTGCCCTCTCTCTACCCTTCTTACTATGAGCGGACAAGATCCC
AATAGCCAGTCCGAAGTCACCAAGCATGATACGGGTTGGCGGAGAGTAGT
TCGCCATTTCACTCCATC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26650CAN33_26650Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26650-T1CAN33_26650-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26650-T1.cdsCAN33_26650-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26650-T1.exon3CAN33_26650-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_26650-T1.exon2CAN33_26650-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26650-T1.exon1CAN33_26650-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR038665
DBxrefInterPro:IPR004695
DBxrefPFAM:PF03595
ProductVoltage-dependent anion channel family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3137763..3138632 -
Powered by Drupal