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CAN33_26690-T1, CAN33_26690-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26690-T1
Unique NameCAN33_26690-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3163483..3164987-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26690-T1 ID=CAN33_26690-T1|Name=CAN33_26690-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1505bp|location=Sequence derived from alignment at NKJJ01000002.1:3163483..3164987- (Aspergillus niger FDAARGOS_311)
ATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAA
CGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGG
CTGCGACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAAC
TCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGA
TGGAGGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGG
TGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGTACTATC
TACCGCACTGGCACCGACGGAGGTAATATGATTCTGGTGGAGAACTCTTC
CGACTTTGAGTTGTACAGCAACTCGTCCTCCGGTGCCGTCCAGGGATTTG
GATATGTGTACCATCGGGAAGGTGATCTTGATGGGCCACGGATTTTGCGA
CTCCAGGATGTGAGTAATTTCGCGGTTCATGATATTATCCTGGTGGACGC
GCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACA
ACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTG
TGGGGTAGCAACATCTGGGTCCACGATGTATGTCCCACGTTATGTCACAA
TAGAAAGCGCTCAGTGCTGACCCATGTATCCAGGTCGAGGTGACCAACAA
GGATGAATGTGTCACGGTCAAGGTAAGGGCCATCTGGTATGATCACCCCT
AGCTCGTGTACTGACAATCCGCAGAGCCCTGCCAACAACATCCTTGTGGA
AAGTATCTACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCG
CGGACACCGATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGT
TCCAACCAGATGTACATGATCAAGAGCAACGGCGGCAGCGGGACAGTCAA
TAACACCCTTCTGGAGAACTTCATTGGTATGTCTGACCCACTCAAACGAG
GTATATATAGCCTCTGACTAATGTGGTTGCAGGACGCGGCAACGCTTATT
CTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGAC
GGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGC
GGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCC
CTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGC
GATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGGATTTTGCCT
TGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCA
CGGCGCCCTCAGGATATTCGGCAACCACAATGGCAGCAGATCTCACCACG
GACTTTGGCACGACCGCGTCCATTCCCATCCCTACCATCCCGACTTCCTT
CTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGG
CTTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3163483..3164987-

>CAN33_26690-T1 ID=CAN33_26690-T1|Name=CAN33_26690-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5364bp|location=Sequence derived from alignment at NKJJ01000002.1:3163483..3164987- (Aspergillus niger FDAARGOS_311)
GACGCGGCAACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATG
ACAGCCGTGGATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAA
CTGGAAGGGAACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGG
TATGCTCAGACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCC
ATGTGGACCGAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTA
TGGCGATGGATTTTGCCTTGAAGACAGCGATTCCACCACCTCGTACACGA
CCACCCAGACTGTCACCACGGCGCCCTCAGGATATTCGGCAACCACAATG
GCAGCAGATCTCACCACGGACTTTGGCACGACCGCGTCCATTCCCATCCC
TACCATCCCGACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGG
CATCGGCTGCCACCACGGCTTGAAGCCCTGCCAACAACATCCTTGTGGAA
AGTATCTACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGC
GGACACCGATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGTT
CCAACCAGATGTACATGATCAAGAGCAACGGCGGCAGCGGGACAGTCAAT
AACACCCTTCTGGAGAACTTCATTGGTCGAGGTGACCAACAAGGATGAAT
GTGTCACGGTCAAGATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCC
CCGTTGCTGGTCAACGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTC
GGCACACTCCAAGGCTGCGACCAAGACGTGTAACGTGCTGGACTATGGTG
CTGTGGCGGACAACTCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGG
GATGCGTGCTCGGATGGAGGTCTGATCTATATTCCTCCTGGTGATTATGC
GATGGATACCTGGGTGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATAT
TAGACGGTACTATCTACCGCACTGGCACCGACGGAGGTAATATGATTCTG
GTGGAGAACTCTTCCGACTTTGAGTTGTACAGCAACTCGTCCTCCGGTGC
CGTCCAGGGATTTGGATATGTGTACCATCGGGAAGGTGATCTTGATGGGC
CACGGATTTTGCGACTCCAGGATGTGAGTAATTTCGCGGTTCATGATATT
ATCCTGGTGGACGCGCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGA
TGGGGAGGTGTACAACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGG
ATGGGATTGATGTGTGGGGTAGCAACATCTGGGTCCACGATGACGCGGCA
ACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTG
GATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGG
AACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAG
ACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACC
GAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGG
ATTTTGCCTTGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGA
CTGTCACCACGGCGCCCTCAGGATATTCGGCAACCACAATGGCAGCAGAT
CTCACCACGGACTTTGGCACGACCGCGTCCATTCCCATCCCTACCATCCC
GACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTG
CCACCACGGCTTGAAGCCCTGCCAACAACATCCTTGTGGAAAGTATCTAC
TGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACCGA
TATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCAGA
TGTACATGATCAAGAGCAACGGCGGCAGCGGGACAGTCAATAACACCCTT
CTGGAGAACTTCATTGGTCGAGGTGACCAACAAGGATGAATGTGTCACGG
TCAAGATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTG
GTCAACGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTC
CAAGGCTGCGACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGG
ACAACTCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGC
TCGGATGGAGGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATAC
CTGGGTGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGTA
CTATCTACCGCACTGGCACCGACGGAGGTAATATGATTCTGGTGGAGAAC
TCTTCCGACTTTGAGTTGTACAGCAACTCGTCCTCCGGTGCCGTCCAGGG
ATTTGGATATGTGTACCATCGGGAAGGTGATCTTGATGGGCCACGGATTT
TGCGACTCCAGGATGTGAGTAATTTCGCGGTTCATGATATTATCCTGGTG
GACGCGCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGT
GTACAACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTG
ATGTGTGGGGTAGCAACATCTGGGTCCACGATGACGCGGCAACGCTTATT
CTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGAC
GGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGC
GGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCC
CTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGC
GATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGGATTTTGCCT
TGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCA
CGGCGCCCTCAGGATATTCGGCAACCACAATGGCAGCAGATCTCACCACG
GACTTTGGCACGACCGCGTCCATTCCCATCCCTACCATCCCGACTTCCTT
CTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGG
CTTGAAGCCCTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACTGG
AGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACTGA
TATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACATGA
TCAAGAGCAACGGCGGCAGCGGGACAGTCAATAACACCCTTCTGGAGAAC
TTCATTGGTCGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGATGC
CTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGC
CAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGC
GACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCA
CCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGA
GGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGGTGTC
TCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGTACTATCTACC
GCACTGGCACCGACGGAGGTAATATGATTCTGGTGGAGAACTCTTCCGAC
TTTGAGTTGTACAGCAACTCGTCCTCCGGTGCCGTCCAGGGATTTGGATA
TGTGTACCATCGGGAAGGTGATCTTGATGGGCCACGGATTTTGCGACTCC
AGGATGTGAGTAATTTCGCGGTTCATGATATTATCCTGGTGGACGCGCCG
GCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACAACAT
GGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGG
GTAGCAACATCTGGGTCCACGATGACGCGGCAACGCTTATTCTCTGGACG
TTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGACGGTGTGCAA
CTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGCGGATGGCGC
CGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCCCTTGCACCG
ACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGCGATGAGCAG
ACCTACACCTGCGAGTCGGCGTATGGCGATGGATTTTGCCTTGAAGACAG
CGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCACGGCGCCCT
CAGGATATTCGGCAACCACAATGGCAGCAGATCTCACCACGGACTTTGGC
ACGACCGCGTCCATTCCCATCCCTACCATCCCGACTTCCTTCTATCCCGG
CTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGGCTTGAAGCC
CTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACTGGAGTGGAGGT
TGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACTGATATTCTGTA
CCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACATGATCAAGAGCA
ACGGCGGCAGCGGGACAGTCAATAACACCCTTCTGGAGAACTTCATTGGT
CGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGATGCCTGCTCTTC
CCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGCCAGCTCTCC
GGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGCGACCAAGAC
GTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCACCGACATTG
GGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGAGGTCTGATC
TATATTCCTCCTGGTGATTATGCGATGGATACCTGGGTGTCTCTGTCGGG
AGGCAAGGCGACCGCCATCATATTAGACGGTACTATCTACCGCACTGGCA
CCGACGGAGGTAATATGATTCTGGTGGAGAACTCTTCCGACTTTGAGTTG
TACAGCAACTCGTCCTCCGGTGCCGTCCAGGGATTTGGATATGTGTACCA
TCGGGAAGGTGATCTTGATGGGCCACGGATTTTGCGACTCCAGGATGTGA
GTAATTTCGCGGTTCATGATATTATCCTGGTGGACGCGCCGGCTTTCCAC
TTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACAACATGGCCATTCG
CGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGGGTAGCAACA
TCTGGGTCCACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26690CAN33_26690Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26690-T1CAN33_26690-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26690-T1.cdsCAN33_26690-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26690-T1.exon4CAN33_26690-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_26690-T1.exon3CAN33_26690-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_26690-T1.exon2CAN33_26690-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26690-T1.exon1CAN33_26690-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefPFAM:PF00295
ProductGlycosyl hydrolases family 28 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3163483..3164987 -
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