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CAN33_2670-T1, CAN33_2670-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2670-T1
Unique NameCAN33_2670-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1640446..1641093+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2670-T1 ID=CAN33_2670-T1|Name=CAN33_2670-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=648bp|location=Sequence derived from alignment at NKJJ01000004.1:1640446..1641093+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCA
AGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACA
CTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCG
GGTCGCACCTGGAGCGAGATTGCCAAGGTCCATAAAGCGCCCCTGCTTCA
ATACCCTCCACTACGTCACGCATGCTGACCTGAAATTCCCGGGTGCTACA
GACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGG
TAAGCAGATCCTAGTCGCTCTTTGTCCGAAGACAGGAGAAGATACTTAAG
CCACGACAGGACATGCACTATGCCGAATTTGCTGAAGATGAGGTAACGAC
CCTTGGCATACGACTTTTTTTTTTTTTTTTTTTTTTTTTGTCAAGCGATG
CTAAAAAGAAGGACAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACG
ATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAG
GTAACATCTCCGGGCCCTGTAGATGCCTTGCTGAGTTGTTGACATGAGTG
AATCAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1640446..1641093+

>CAN33_2670-T1 ID=CAN33_2670-T1|Name=CAN33_2670-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1920bp|location=Sequence derived from alignment at NKJJ01000004.1:1640446..1641093+ (Aspergillus niger FDAARGOS_311)
ATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCA
AGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACA
CTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCG
GGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCGGACCGAAGG
TAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGCCGAATTTGCTG
AAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCGAAT
AAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGA
ACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGGCGGCGCCAGGCG
CGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGGGCCTGGGGGATCA
GAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACACTCCTTGGACTGCTGA
GGAAGAGCAGAGGCTGAAGACTATGCGCGATGCGGGTCGCACCTGGAGCG
AGATTGCCAAGACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGCAT
TGGTACAAGGACATGCACTATGCCGAATTTGCTGAAGATGAGTCCGTAGC
ACTCCGAGAAGCGATTAGGGAATACGATGCGAATAAATGGAAGGCGATTG
GACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGAACAGTATGCAAAAGAA
CATTTCAAGGATCTTTAGATGGCGGCGCCAGGCGCGGCTCCGGCAACTGG
AGAAACCGCGCACGAGCAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGA
AGAAGGGGAGGACCAACACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTG
AAGACTATGCGCGATGCGGGTCGCACCTGGAGCGAGATTGCCAAGACATT
CCCTACCCGGACCGAAGGTAGCGTCAAGAAGCATTGGTACAAGGACATGC
ACTATGCCGAATTTGCTGAAGATGAGTCCGTAGCACTCCGAGAAGCGATT
AGGGAATACGATGCGAATAAATGGAAGGCGATTGGACTGAAAGTTGGAAA
GCCAGCCAAGGCGTGCGAACAGTATGCAAAAGAACATTTCAAGGATCTTT
AGATGGCGGCGCCAGGCGCGGCTCCGGCAACTGGAGAAACCGCGCACGAG
CAAGGGCCTGGGGGATCAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAA
CACTCCTTGGACTGCTGAGGAAGAGCAGAGGCTGAAGACTATGCGCGATG
CGGGTCGCACCTGGAGCGAGATTGCCAAGACATTCCCTACCCGGACCGAA
GGTAGCGTCAAGAAGCATTGGTACAAGGACATGCACTATGCCGAATTTGC
TGAAGATGAGTCCGTAGCACTCCGAGAAGCGATTAGGGAATACGATGCGA
ATAAATGGAAGGCGATTGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGC
GAACAGTATGCAAAAGAACATTTCAAGGATCTTTAGATGGCGGCGCCAGG
CGCGGCTCCGGCAACTGGAGAAACCGCGCACGAGCAAGGGCCTGGGGGAT
CAGAGCCTGCCCCCAAGAAGAAGGGGAGGACCAACACTCCTTGGACTGCT
GAGGAAGAGCAGAGGCTGAAGACTATGCGCGATGCGGGTCGCACCTGGAG
CGAGATTGCCAAGACATTCCCTACCCGGACCGAAGGTAGCGTCAAGAAGC
ATTGGTACAAGGACATGCACTATGCCGAATTTGCTGAAGATGAGTCCGTA
GCACTCCGAGAAGCGATTAGGGAATACGATGCGAATAAATGGAAGGCGAT
TGGACTGAAAGTTGGAAAGCCAGCCAAGGCGTGCGAACAGTATGCAAAAG
AACATTTCAAGGATCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_2670CAN33_2670Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2670-T1CAN33_2670-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2670-T1.exon1CAN33_2670-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2670-T1.exon2CAN33_2670-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2670-T1.exon3CAN33_2670-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_2670-T1.exon4CAN33_2670-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_2670-T1.exon5CAN33_2670-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2670-T1.cdsCAN33_2670-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
ProductMyb-like DNA-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1640446..1641093 +
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