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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3240020..3241231- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26775-T1 ID=CAN33_26775-T1|Name=CAN33_26775-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1212bp|location=Sequence derived from alignment at NKJJ01000002.1:3240020..3241231- (Aspergillus niger FDAARGOS_311)
ATGAGTGTATGTCGAGACCCAGAACGTCATTATCTTGACCCTCTCCGCTA
CCCCACCCCTTATTATTCACCACCTGCGCATCGTCAAATAGCCTGCTAAC
TCGCCGATTTTCTAGTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAA
CCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCCATGG
AGCAGGGCAACGGTAGCTACGGTAAGCGCACCATGTCCAGTACCCTCCCA
GCCTGACCCGACGATTGCCTAACATGCGTTCGCATATCAGAAATGGGCTC
TTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACAAGTGCAGAGAGA
TCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCG
GCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGT
CGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGAACAACGGATTCC
GTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGA
GACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCG
AGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGC
GGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCC
GAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAG
CTTCCAGGTATGCTCTTTCGAGAGATTTCAGAAAGTCCATGCTAACGTTT
CGGTTAGGTTACTGGTAGCCGGACTAGACAGGCCAACGACGCCAGGCAGG
CCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATG
GAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGA
GCCTGCTGTGGAGCAGATCAACCAGGATGCAGACAATGTTGCGCAGAACG
TTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGG
GCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCAGTAAGTGTCCCCG
ATGTGAGTACCCACTTAATAGGCCAGGCTGACAATTATCTTTAGTCCTCA
TCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGAAGCCAACAAG
TCCTCGAAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3240020..3241231- >CAN33_26775-T1 ID=CAN33_26775-T1|Name=CAN33_26775-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4635bp|location=Sequence derived from alignment at NKJJ01000002.1:3240020..3241231- (Aspergillus niger FDAARGOS_311)
TCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGAAGCC
AACAAGTCCTCGAAATAGGTTACTGGTAGCCGGACTAGACAGGCCAACGA
CGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGC
AGGATATGATGGAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTC
CACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGATGCAGACAATGT
TGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCA
GCGCTCGTCGGGCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCAAA
ATGGGCTCTTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACAAGTG
CAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCC
AGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAG
GACCAGGTCGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGAACAA
CGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCG
GCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAAC
CTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCCAGAA
GCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAG
CTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAG
GAGCAGAGCTTCCAGTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAA
CCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCCATGG
AGCAGGGCAACGGTAGCTACGATGAGTTCCTCATCATCGCCATCGTCGTC
GGTGTTGCTGTCGGTGTCACGGAAGCCAACAAGTCCTCGAAATAGGTTAC
TGGTAGCCGGACTAGACAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGC
GATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAGCTTGGCCGC
CTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGA
GCAGATCAACCAGGATGCAGACAATGTTGCGCAGAACGTTTCGAACGCGA
ACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCGAGAAAGTGG
AAGTGGTATGCTCTGCTTGTCGTCAAAATGGGCTCTTACAACCAGCCTGC
GGACGCGACGACGCTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTG
CGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCCGCCCAGAACGCC
TTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGACTCT
GGACTACATTGAGGATGAAGTGAACAACGGATTCCGTTACCTCCGCGATC
TTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGACAGCCGTGTGCAG
ACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAACAGTA
CCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCA
GACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAGGAGATCGAGCAG
GGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGTACGGTGG
AAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGATGCCA
ACCCCTACAGCGACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGAT
GAGTTCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGA
AGCCAACAAGTCCTCGAAATAGGTTACTGGTAGCCGGACTAGACAGGCCA
ACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATC
GAGCAGGATATGATGGAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCT
TGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGATGCAGACA
ATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATC
GCCAGCGCTCGTCGGGCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGT
CAAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACA
AGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAG
GGCCAGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAA
GGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGA
ACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACC
CCCGGCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCG
GAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCC
AGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCC
GAAGCTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGG
CCAGGAGCAGAGCTTCCAGTACGGTGGAAACCAGGGTGGCTACGGCCAGT
ACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCC
ATGGAGCAGGGCAACGGTAGCTACGATGAGTTCCTCATCATCGCCATCGT
CGTCGGTGTTGCTGTCGGTGTCACGGAAGCCAACAAGTCCTCGAAATAGG
TTACTGGTAGCCGGACTAGACAGGCCAACGACGCCAGGCAGGCCGCTTTG
GAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAGCTTGG
CCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTG
TGGAGCAGATCAACCAGGATGCAGACAATGTTGCGCAGAACGTTTCGAAC
GCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCGAGAAA
GTGGAAGTGGTATGCTCTGCTTGTCGTCAAAATGGGCTCTTACAACCAGC
CTGCGGACGCGACGACGCTGCTGAACAAGTGCAGAGAGATCAACGACGGT
ATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCCGCCCAGAA
CGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGA
CTCTGGACTACATTGAGGATGAAGTGAACAACGGATTCCGTTACCTCCGC
GATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGACAGCCGTGT
GCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAAC
AGTACCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTT
CGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAGGAGATCGA
GCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGTACG
GTGGAAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGAT
GCCAACCCCTACAGCGACGCCAATGCCATGGAGCAGGGCAACGGTAGCTA
CGATGAGTTCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCA
CGGAAGCCAACAAGTCCTCGAAATAGGTTACTGGTAGCCGGACTAGACAG
GCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAA
GATCGAGCAGGATATGATGGAGCTTGGCCGCCTGTACCAGGAAGTGGCGG
AGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGATGCA
GACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGC
TATCGCCAGCGCTCGTCGGGCGAGAAAGTGGAAGTGGTATGCTCTGCTTG
TCGTCAAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACGCTGCTG
AACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCG
CGAGGGCCAGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCG
GAAAGGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAGGATGAA
GTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCA
GACCCCCGGCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTA
GCCGGAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAGTCCGAC
TTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAA
CCCCGAAGCTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGT
TGGGCCAGGAGCAGAGCTTCCAGTACGGTGGAAACCAGGGTGGCTACGGC
CAGTACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAA
TGCCATGGAGCAGGGCAACGGTAGCTACGATGAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010989 |
| DBxref | InterPro:IPR000727 |
| DBxref | InterPro:IPR006011 |
| DBxref | PFAM:PF00804 |
| DBxref | PFAM:PF05739 |
| Product | SNARE domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3240020..3241231 - |
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