You are here

Home

CAN33_26780-T1, CAN33_26780-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26780-T1
Unique NameCAN33_26780-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3244765..3246727-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26780-T1 ID=CAN33_26780-T1|Name=CAN33_26780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1963bp|location=Sequence derived from alignment at NKJJ01000002.1:3244765..3246727- (Aspergillus niger FDAARGOS_311)
ATGTCTGGAGATCATGAGGCTGAGATCACTCAGTAAGTTTCCATTGCCTT
TTGTCGTTTGTTTTTTTTTTTTTTTTCACACCTCCTGTGGGCTAGCCCAT
CTTCCGTGTCTGTGACTCAGTGAGTCACTATTCCATCACAGCTCACTCGA
ATCTCGCTCCCTCCTCCTGCCAATACTGATTGATATCCCAGGCCGCAACA
ACAGGGCCACGGCACCGAAACTATTGTGAACGAAAAGGCGGCATTCACCG
AGGCCAGCGAAAAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCAAC
GCTGAGGAAGTCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTC
CGCATGGCTTGTCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTACG
GAATGTCTGGCATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAAGT
GAGGGACGCGGTGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTCAC
CACTTTCTTCCAGTTCTGGTGTTATGGTTCGTTCACTACTGCATAAAATG
CTTGGGATCATGGACTGACATTTGCTCAAAGTTACCCCCATCATCGGTGC
CATCGTCGCTGATCAGTACCTCGGTAAATACAAGACCATCGTGGTTTTCT
GTATCATTTACTTGGTCGGACTCCTCATCCTGGTTTGCACGTCCATCCCG
ACGGCTCTTCACCATGGAGCCGGTGTTGGTGGCTTCATTGTGTCTATCCT
GATCATTGGTCTGGGAACTGGCGGTATCAAGAGTAACGTTGCTCCTCTGA
TTGCCGACCAGTACAAGCGCAAGAAGATGGCCATGTCCACCACCAAGAAG
GGCGAGCGTGTTGTCATTGACCCTTCCCTTACGATTCAGCGCATTTACAT
GATCTTCTACGGCTGTATCAACGTGGGATCGCTGTCTCTGTTGGCCACTC
CTTATATGGAGAAGTACATTGGCTTCTGGTCCGGTTATCTGCTTTGCCTG
TGCATGTTCGCTGTCGGTACCATGGTGCTCATCTTCGGCCGCAAGTACTA
CGTCGTTCGCCCTCCCCAGGGCTCCATTATCACCGACGCCTTCAAGGCGC
TGTGGATCATGATTGTCAACCGCAACATGGATGCTCCCAAGCCCAGCTGG
CAGGCAGCCAACAACGGTACCAGGACCAACGTGCCCTGGGACGACCACTT
CATCGACGAGCTCAAGCGTGCGCTGGTTGCTTGCCGTGTGTTCTGTTTCT
ACCCGATCTACTGGGTCGTTTACGGTCAATTCTCCAGCAACTTTGTCACC
CAGGCCGGCCAGATGGAGGGTCACGGAATCCCGAACGACTTGATGCAGAA
CTTTGATCCTATCTCCATCATTGTCTTCATCCCCGTCCTGGAGACCCTTG
TCTATCCCCTGCTGCGTCGCTTGCGCATTCGTTTCCGCCCGATTACCCGT
ATTTCCCTGGGTTTCGTTGTTGCCTCCTTGGCCATGATGTACGCCGCCAT
TGTCCAGCACCTCATTTACTCCGCTGGGCCATGCTACGAGCACCCCGGAT
GTGCTGCTTCGGAGGTTGATGGGTCCACCACCGGCAACCACGTGCACATT
GCTATCCAGACGCCTGCCTATGTCTTCATTGGTCTGTCTGAGATTTTCGC
GTCGGTGTCTGGATTGGAGTATGCCTACACCAAGGCTCCTCCGTCGATGA
AGTCCTTCGTGCAGTCCATGTACCTGCTCACCAACGCCTTTGGTTCCGCT
CTGGCCGAGGCACTGACCCCCGCTGCCTATGACCCGGCCATCATGTGGAT
GTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTGCCGGTATCATCTTCTGGC
TGGTGTACCACCACCTCAACGACCAGGAAGACCAGCTGAATGCGCTCGAC
GCAGACGATCCGGATGCTCCTGCCCCGCCGGCCTATGAGGAGAAGAAGGA
GCACGAGAACTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000002.1:3244765..3246727-

>CAN33_26780-T1 ID=CAN33_26780-T1|Name=CAN33_26780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5247bp|location=Sequence derived from alignment at NKJJ01000002.1:3244765..3246727- (Aspergillus niger FDAARGOS_311)
TTACCCCCATCATCGGTGCCATCGTCGCTGATCAGTACCTCGGTAAATAC
AAGACCATCGTGGTTTTCTGTATCATTTACTTGGTCGGACTCCTCATCCT
GGTTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTG
GCTTCATTGTGTCTATCCTGATCATTGGTCTGGGAACTGGCGGTATCAAG
AGTAACGTTGCTCCTCTGATTGCCGACCAGTACAAGCGCAAGAAGATGGC
CATGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTA
CGATTCAGCGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCG
CTGTCTCTGTTGGCCACTCCTTATATGGAGAAGTACATTGGCTTCTGGTC
CGGTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCA
TCTTCGGCCGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATC
ACCGACGCCTTCAAGGCGCTGTGGATCATGATTGTCAACCGCAACATGGA
TGCTCCCAAGCCCAGCTGGCAGGCAGCCAACAACGGTACCAGGACCAACG
TGCCCTGGGACGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCT
TGCCGTGTGTTCTGTTTCTACCCGATCTACTGGGTCGTTTACGGTCAATT
CTCCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCC
CGAACGACTTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATC
CCCGTCCTGGAGACCCTTGTCTATCCCCTGCTGCGTCGCTTGCGCATTCG
TTTCCGCCCGATTACCCGTATTTCCCTGGGTTTCGTTGTTGCCTCCTTGG
CCATGATGTACGCCGCCATTGTCCAGCACCTCATTTACTCCGCTGGGCCA
TGCTACGAGCACCCCGGATGTGCTGCTTCGGAGGTTGATGGGTCCACCAC
CGGCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTG
GTCTGTCTGAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACC
AAGGCTCCTCCGTCGATGAAGTCCTTCGTGCAGTCCATGTACCTGCTCAC
CAACGCCTTTGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATG
ACCCGGCCATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTT
GCCGGTATCATCTTCTGGCTGGTGTACCACCACCTCAACGACCAGGAAGA
CCAGCTGAATGCGCTCGACGCAGACGATCCGGATGCTCCTGCCCCGCCGG
CCTATGAGGAGAAGAAGGAGCACGAGAACTGAGCCGCAACAACAGGGCCA
CGGCACCGAAACTATTGTGAACGAAAAGGCGGCATTCACCGAGGCCAGCG
AAAAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAA
GTCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCT
TGTCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTACGGAATGTCTG
GCATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGC
GGTGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTCACCACTTTCTT
CCAGTTCTGGTGTTATGATGTCTGGAGATCATGAGGCTGAGATCACTCAT
TACCCCCATCATCGGTGCCATCGTCGCTGATCAGTACCTCGGTAAATACA
AGACCATCGTGGTTTTCTGTATCATTTACTTGGTCGGACTCCTCATCCTG
GTTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTGG
CTTCATTGTGTCTATCCTGATCATTGGTCTGGGAACTGGCGGTATCAAGA
GTAACGTTGCTCCTCTGATTGCCGACCAGTACAAGCGCAAGAAGATGGCC
ATGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTAC
GATTCAGCGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCGC
TGTCTCTGTTGGCCACTCCTTATATGGAGAAGTACATTGGCTTCTGGTCC
GGTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCAT
CTTCGGCCGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATCA
CCGACGCCTTCAAGGCGCTGTGGATCATGATTGTCAACCGCAACATGGAT
GCTCCCAAGCCCAGCTGGCAGGCAGCCAACAACGGTACCAGGACCAACGT
GCCCTGGGACGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCTT
GCCGTGTGTTCTGTTTCTACCCGATCTACTGGGTCGTTTACGGTCAATTC
TCCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCCC
GAACGACTTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATCC
CCGTCCTGGAGACCCTTGTCTATCCCCTGCTGCGTCGCTTGCGCATTCGT
TTCCGCCCGATTACCCGTATTTCCCTGGGTTTCGTTGTTGCCTCCTTGGC
CATGATGTACGCCGCCATTGTCCAGCACCTCATTTACTCCGCTGGGCCAT
GCTACGAGCACCCCGGATGTGCTGCTTCGGAGGTTGATGGGTCCACCACC
GGCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTGG
TCTGTCTGAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACCA
AGGCTCCTCCGTCGATGAAGTCCTTCGTGCAGTCCATGTACCTGCTCACC
AACGCCTTTGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATGA
CCCGGCCATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTG
CCGGTATCATCTTCTGGCTGGTGTACCACCACCTCAACGACCAGGAAGAC
CAGCTGAATGCGCTCGACGCAGACGATCCGGATGCTCCTGCCCCGCCGGC
CTATGAGGAGAAGAAGGAGCACGAGAACTGAGCCGCAACAACAGGGCCAC
GGCACCGAAACTATTGTGAACGAAAAGGCGGCATTCACCGAGGCCAGCGA
AAAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAAG
TCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCTT
GTCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTACGGAATGTCTGG
CATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGCG
GTGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTCACCACTTTCTTC
CAGTTCTGGTGTTATGATGTCTGGAGATCATGAGGCTGAGATCACTCATT
ACCCCCATCATCGGTGCCATCGTCGCTGATCAGTACCTCGGTAAATACAA
GACCATCGTGGTTTTCTGTATCATTTACTTGGTCGGACTCCTCATCCTGG
TTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTGGC
TTCATTGTGTCTATCCTGATCATTGGTCTGGGAACTGGCGGTATCAAGAG
TAACGTTGCTCCTCTGATTGCCGACCAGTACAAGCGCAAGAAGATGGCCA
TGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTACG
ATTCAGCGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCGCT
GTCTCTGTTGGCCACTCCTTATATGGAGAAGTACATTGGCTTCTGGTCCG
GTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCATC
TTCGGCCGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATCAC
CGACGCCTTCAAGGCGCTGTGGATCATGATTGTCAACCGCAACATGGATG
CTCCCAAGCCCAGCTGGCAGGCAGCCAACAACGGTACCAGGACCAACGTG
CCCTGGGACGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCTTG
CCGTGTGTTCTGTTTCTACCCGATCTACTGGGTCGTTTACGGTCAATTCT
CCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCCCG
AACGACTTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATCCC
CGTCCTGGAGACCCTTGTCTATCCCCTGCTGCGTCGCTTGCGCATTCGTT
TCCGCCCGATTACCCGTATTTCCCTGGGTTTCGTTGTTGCCTCCTTGGCC
ATGATGTACGCCGCCATTGTCCAGCACCTCATTTACTCCGCTGGGCCATG
CTACGAGCACCCCGGATGTGCTGCTTCGGAGGTTGATGGGTCCACCACCG
GCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTGGT
CTGTCTGAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACCAA
GGCTCCTCCGTCGATGAAGTCCTTCGTGCAGTCCATGTACCTGCTCACCA
ACGCCTTTGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATGAC
CCGGCCATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTGC
CGGTATCATCTTCTGGCTGGTGTACCACCACCTCAACGACCAGGAAGACC
AGCTGAATGCGCTCGACGCAGACGATCCGGATGCTCCTGCCCCGCCGGCC
TATGAGGAGAAGAAGGAGCACGAGAACTGAGCCGCAACAACAGGGCCACG
GCACCGAAACTATTGTGAACGAAAAGGCGGCATTCACCGAGGCCAGCGAA
AAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAAGT
CGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCTTG
TCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTACGGAATGTCTGGC
ATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGCGG
TGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTCACCACTTTCTTCC
AGTTCTGGTGTTATGATGTCTGGAGATCATGAGGCTGAGATCACTCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26780CAN33_26780Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26780-T1CAN33_26780-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26780-T1.cdsCAN33_26780-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26780-T1.exon3CAN33_26780-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_26780-T1.exon2CAN33_26780-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26780-T1.exon1CAN33_26780-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR000109
DBxrefPFAM:PF00854
ProductPOT family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3244765..3246727 -
Powered by Drupal