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CAN33_26820-T1, CAN33_26820-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26820-T1
Unique NameCAN33_26820-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3275755..3276622-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26820-T1 ID=CAN33_26820-T1|Name=CAN33_26820-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=868bp|location=Sequence derived from alignment at NKJJ01000002.1:3275755..3276622- (Aspergillus niger FDAARGOS_311)
ATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGC
CGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGA
ATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAG
CATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGG
CAAGGTACGGATTCTTGCCGAATCAGACGCAGCAGTTGATCAGACAACTA
ACCTTGCCTGTGCGATAGGGCGATAACTGGAATGATCTGTTGAAGGAAGT
CGTGACTTTCAACTCCGTTGAGGAATTCTGGGGTATCTACGTATGTGTTC
TTCTTTTGGGCCCACCGAGGAGACCTGCCCGCTAACCAATGCTTCCTTAG
AACAACATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCT
CTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACG
GAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGAC
GACCTGTGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTCGAGAA
CGATGGTGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCT
TCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGA
GACAAGAACGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACAT
CGGCCGGCGTTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTG
AGTTCTCGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAG
GCCAAGTACACTGTCTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3275755..3276622-

>CAN33_26820-T1 ID=CAN33_26820-T1|Name=CAN33_26820-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2232bp|location=Sequence derived from alignment at NKJJ01000002.1:3275755..3276622- (Aspergillus niger FDAARGOS_311)
AACAACATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCT
CTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACG
GAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGAC
GACCTGTGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTCGAGAA
CGATGGTGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCT
TCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGA
GACAAGAACGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACAT
CGGCCGGCGTTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTG
AGTTCTCGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAG
GCCAAGTACACTGTCTAAGGCGATAACTGGAATGATCTGTTGAAGGAAGT
CGTGACTTTCAACTCCGTTGAGGAATTCTGGGGTATCTACATGGCCGCTG
TTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTT
GCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTC
TGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGA
TGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGAACAAC
ATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCTCTTCAA
GAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACGGAGGCA
AGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGACGACCTG
TGGCTGCACGCACAACTGGCCGCTATTGGCGAGACTCTCGAGAACGATGG
TGACAACGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCTTCTACC
GTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGAGACAAG
AACGGTCGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACATCGGCCG
GCGTTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTGAGTTCT
CGGGTCACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAGGCCAAG
TACACTGTCTAAGGCGATAACTGGAATGATCTGTTGAAGGAAGTCGTGAC
TTTCAACTCCGTTGAGGAATTCTGGGGTATCTACATGGCCGCTGTTGCTG
AGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTTGCTGCC
GCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTCTGTCAC
AGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGATGCACG
AGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGAACAACATCTCG
CCGACATCCGAGTTGGGCCTCAAAGCAGACTACCATCTCTTCAAGAAGGG
AGTTCGTCCCGAGTGGGAAGACCCCCAGAACAAGCACGGAGGCAAGTGGT
CATACTCTTTCAAGGACAAGCGCTCCGTGCCCATCGACGACCTGTGGCTG
CACGCACAACTGGCCGCTATTGGCGAGACTCTCGAGAACGATGGTGACAA
CGAGGTTATGGGTGTTGTTGTGAACGTACGCAAGGGCTTCTACCGTGTTG
GTCTGTGGACTCGGACTGTTGGCAAGAGTATCCCCGGAGACAAGAACGGT
CGCACACCCGCACAGGGCAAGGAGATCCTCGAGAACATCGGCCGGCGTTT
CAAGGAAGTCCTTCGTCTCAAGGAGGCTGATGCCGTTGAGTTCTCGGGTC
ACACGGACAGCGCACACAGCGGCAGCACGAGAGCCAAGGCCAAGTACACT
GTCTAAGGCGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAA
CTCCGTTGAGGAATTCTGGGGTATCTACATGGCCGCTGTTGCTGAGAACG
GCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTTGCTGCCGCCGTC
GAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTCTGTCACAGTATT
CCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGATGCACGAGTGGA
CTCTGTGGTTTACCAAGCCCCCTAGCGGCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26820CAN33_26820Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26820-T1CAN33_26820-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26820-T1.cdsCAN33_26820-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26820-T1.exon3CAN33_26820-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_26820-T1.exon2CAN33_26820-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26820-T1.exon1CAN33_26820-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092646VF
DBxrefInterPro:IPR019770
DBxrefInterPro:IPR023398
DBxrefInterPro:IPR001040
DBxrefPFAM:PF01652
ProductEukaryotic initiation factor 4E family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3275755..3276622 -
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