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CAN33_26870-T1, CAN33_26870-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26870-T1
Unique NameCAN33_26870-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3307516..3310533-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26870-T1 ID=CAN33_26870-T1|Name=CAN33_26870-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3018bp|location=Sequence derived from alignment at NKJJ01000002.1:3307516..3310533- (Aspergillus niger FDAARGOS_311)
ATGCCGGACCTGCCACGGACGCTCGCTCGGTCCTGGTCGTCGACGCTCAA
GCTCCCGAAATCGACGTTCCCTGCACGCGTGACGCCGGCCGATCGGACAA
AATACTTGCAGCGATGCACCGACGACCTCTACGCCTGGCAACAGCGTGAA
AGACCAGCCAGCCAGCCGTTCGTCCTGCACGATGGACCACCATACGCAAA
CGGTGACCTTCACATCGGCCATGCTCTCAACAAAGTACTAAAAGACATCA
TTTGCCGTGTGCAGCTCGGTCTGGGAAAGCGGATTCGATACGTACCGGGA
TGGGACTGTCACGGCTTGCCGATAGAGCTGAAGGCTCTAGAAGCGCAAAA
GGAACTACAGGGACAGGAACACAATGGACCCGTTAGCGCAGCGCTGGTAC
GCAAGGCTGCGCGCAAATTGGCTGATCGGACGGTCAAGGCGCAGATGAAG
GGATTCCGGAGCTTCGCGGTCATGGCGGACTGGGAGAACCATTGGAAGAC
TATGGATAAGGCGTTTGAGAAGAGACAACTTGGCGTTTTTCGGGAAATGG
TCGATAAGGGATTGATCTATCGGAGATTCAAGCCGGTTTACTGGTCGCCG
TCTACTGGGACGGCACTGGCGGAGGCCGAGCTGGAATACAAGGAAGATCA
TGTTTCAACGGCTGCTTTGGTGAAATACCCTCTTGCTAGCATCCCGGAGC
ACCTGGCACAGGACCCTTTGCTTAAGGATAAGGAAATCAGCGCTGTTATT
TGGACTACGACTCCCTGGACACTCCCGGCAAACGCGGCTATCTCGGTTCA
CCCGTCTTTGGATTACACGATTGTCGAATCAGATACGCAGGGTTATCTCC
TCATTGCGCAATCTCGGCTGGAATACCTCGAGGGTATCCTGAAGGAGGAT
TTGTCGGTCATTGTGCCAGCTATTCCTGGCTCGAAGCTTGCTGATCAGAC
TACATACCGACCTCTGTTCAAGGGATCCGATGCGGAGCCGCAACCCATCA
TTGCTGCGGACTTCGTCACCGCCGACTCCGGATCAGGTCTCGTTCATTGC
GCCCCAGGCCACGGTATGGAGGACTACGAAGCCTGCTTATCCCGAGGTAT
CCCCGCTTTCGCCCCCGTGGACGACAACGGCAAATTCACCGACAAGGCCA
TGCCCAGCGACCCGACAAGGCTCAGTGGAAAGAGCGTCCTGAGTGATGGA
AACGCTGCTGTTCTCGAATACGTTGAATCCCAAGGCCTGCTGATCACAAA
GCACCGCTACGAGCACAAATATCCCTACGACTGGCGGTCCAAGCTTCCCA
TCATCATCCGCGCCACAGAGCAATGGTTCGCCGACGTAGCCGACATCCGT
GGCAGCGCCATGACAGCTCTCGAGGATGTCAACTTCGTGCCTACTGCCGG
AAGACAGCGACTGGAGAACTTCGTCAAGAACCGCAGCGAATGGTGTATCT
CGCGTCAACGCGCCTGGGGAGTCCCTATCCCGGCGCTTTACCACCGCGGT
ACAGGCGATGCTTTGCTTACCAAGGACAGTGTATCTCACATCATGAATGT
CATCGAAGAGCGTGGCATTGACGCATGGTGGACAGACGACGCCAACGACG
AGGCGTGGATCCCACCAGCTCTGCGAGACGCCTCTGGGCCCGGCTACAGA
CGCGGAACCGATACCATGGACGTGTGGTTCGACAGCGGCACCAGCTGGAC
CGAGATCGACCTTCCTTACCGTGACGGCGGATATCCCGCAGACGTCTACC
TGGAGGGCACCGACCAACACAGAGGATGGTTCCAGTCCGGTCTCCTCACC
TTCATTGCCCACCAGCTCGCGTCCGGACACACCGCATCCCCTCGCGCGCC
CTTCAAGAACCTCGTCACCCATGGTTTTACCCTGGATGAGGAGGGACGCA
AGATGAGCAAGTCGATCGGCAATGTGATCCAGCCAGAGTCAATCATGGAT
GGCACGCTCTTGCCACCCCTCAAGCCGAGAAAAGGCAAGGGGAAAAAGCA
AGCCGAGAACCAGGCACCGGTCTACGACGCGCTTGGCCCGGATGCTCTGC
GAATGTGGGTTGCAAGCAGCGACTACACGCGGGATGTCGTGATTGGCAAG
CAAGTCCTTCAGACGGTCAACACCAGCTTGCACAAGTACCGTGTGACATT
CAAGCTGCTGCTTGGTGCCTTGTCTGACTTCCGTCTGGAGGATCGTCTTC
CCTATGATCAGCTGCAGCAAGTGGATCGCATCGCTCTGAAACATCTGTCT
GACACCGTCTTGGCCTGCCAGAAGGCCTGCGAGAACTTTGAGTTTTACAA
GGCTGTGAATGCCATTAACCGCTGGGCTAACCTTGAGTTTTCTGCATTCT
ACATGGAAGCTATCAAGGACCGTCTTTACACCTACGCTGAGAACAGCACC
AGCAGAAGGGCTGCCCAGACGACCTTGTTCCACATCTACCACCACCTTCA
AGAGGTGCTGGCTCCCATCACTCCGTTGTTGGTCGAGGAGACCTGGGAGC
ATACGCCCGAGGCCATCAAGACCCACTGCGAGCATCCGCTGAAACGGATT
GTTTCCGCGCCCGCCTCTGAATGGCAGAACCAGGCTCTGGAAGCGGACTA
TCAGGATATTGTGGCCGTCAACTCCGTGGTCAAGGCGATTCAAGAAAAGG
CCCGTGGCCAGAAGCAGATGGGCTCTTCCCTGCAATCGTTCGTCCACATC
GTTCTTCCCCACGGCGCGACGGGCGAATCGGTCTTCGCGCGCCTCCAGTC
CGAGCTGCCTGATGTGTTTGTTGTCTCGTCGGTCAGCCTCGGGGCGCACG
AGGAGCCGATCCCGGAGGACATTCGCAATGCGGAGTGGCAGTATAGTGAG
GAGTACGAGCTGCCGAGTGGCGGCAGAGGAACGGTACATGTGTATACCCC
GCAAGCGAGCAAGTGTCCGCGCTGCTGGCGTTATGTGGTGCCCGAGTCAG
AGGCGGCGGAAGAGACGGTGTGTGGGCGCTGCGAGGAGGTGGTGCAAGAG
TTGGATGCATCGAGCTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3307516..3310533-

>CAN33_26870-T1 ID=CAN33_26870-T1|Name=CAN33_26870-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3018bp|location=Sequence derived from alignment at NKJJ01000002.1:3307516..3310533- (Aspergillus niger FDAARGOS_311)
ATGCCGGACCTGCCACGGACGCTCGCTCGGTCCTGGTCGTCGACGCTCAA
GCTCCCGAAATCGACGTTCCCTGCACGCGTGACGCCGGCCGATCGGACAA
AATACTTGCAGCGATGCACCGACGACCTCTACGCCTGGCAACAGCGTGAA
AGACCAGCCAGCCAGCCGTTCGTCCTGCACGATGGACCACCATACGCAAA
CGGTGACCTTCACATCGGCCATGCTCTCAACAAAGTACTAAAAGACATCA
TTTGCCGTGTGCAGCTCGGTCTGGGAAAGCGGATTCGATACGTACCGGGA
TGGGACTGTCACGGCTTGCCGATAGAGCTGAAGGCTCTAGAAGCGCAAAA
GGAACTACAGGGACAGGAACACAATGGACCCGTTAGCGCAGCGCTGGTAC
GCAAGGCTGCGCGCAAATTGGCTGATCGGACGGTCAAGGCGCAGATGAAG
GGATTCCGGAGCTTCGCGGTCATGGCGGACTGGGAGAACCATTGGAAGAC
TATGGATAAGGCGTTTGAGAAGAGACAACTTGGCGTTTTTCGGGAAATGG
TCGATAAGGGATTGATCTATCGGAGATTCAAGCCGGTTTACTGGTCGCCG
TCTACTGGGACGGCACTGGCGGAGGCCGAGCTGGAATACAAGGAAGATCA
TGTTTCAACGGCTGCTTTGGTGAAATACCCTCTTGCTAGCATCCCGGAGC
ACCTGGCACAGGACCCTTTGCTTAAGGATAAGGAAATCAGCGCTGTTATT
TGGACTACGACTCCCTGGACACTCCCGGCAAACGCGGCTATCTCGGTTCA
CCCGTCTTTGGATTACACGATTGTCGAATCAGATACGCAGGGTTATCTCC
TCATTGCGCAATCTCGGCTGGAATACCTCGAGGGTATCCTGAAGGAGGAT
TTGTCGGTCATTGTGCCAGCTATTCCTGGCTCGAAGCTTGCTGATCAGAC
TACATACCGACCTCTGTTCAAGGGATCCGATGCGGAGCCGCAACCCATCA
TTGCTGCGGACTTCGTCACCGCCGACTCCGGATCAGGTCTCGTTCATTGC
GCCCCAGGCCACGGTATGGAGGACTACGAAGCCTGCTTATCCCGAGGTAT
CCCCGCTTTCGCCCCCGTGGACGACAACGGCAAATTCACCGACAAGGCCA
TGCCCAGCGACCCGACAAGGCTCAGTGGAAAGAGCGTCCTGAGTGATGGA
AACGCTGCTGTTCTCGAATACGTTGAATCCCAAGGCCTGCTGATCACAAA
GCACCGCTACGAGCACAAATATCCCTACGACTGGCGGTCCAAGCTTCCCA
TCATCATCCGCGCCACAGAGCAATGGTTCGCCGACGTAGCCGACATCCGT
GGCAGCGCCATGACAGCTCTCGAGGATGTCAACTTCGTGCCTACTGCCGG
AAGACAGCGACTGGAGAACTTCGTCAAGAACCGCAGCGAATGGTGTATCT
CGCGTCAACGCGCCTGGGGAGTCCCTATCCCGGCGCTTTACCACCGCGGT
ACAGGCGATGCTTTGCTTACCAAGGACAGTGTATCTCACATCATGAATGT
CATCGAAGAGCGTGGCATTGACGCATGGTGGACAGACGACGCCAACGACG
AGGCGTGGATCCCACCAGCTCTGCGAGACGCCTCTGGGCCCGGCTACAGA
CGCGGAACCGATACCATGGACGTGTGGTTCGACAGCGGCACCAGCTGGAC
CGAGATCGACCTTCCTTACCGTGACGGCGGATATCCCGCAGACGTCTACC
TGGAGGGCACCGACCAACACAGAGGATGGTTCCAGTCCGGTCTCCTCACC
TTCATTGCCCACCAGCTCGCGTCCGGACACACCGCATCCCCTCGCGCGCC
CTTCAAGAACCTCGTCACCCATGGTTTTACCCTGGATGAGGAGGGACGCA
AGATGAGCAAGTCGATCGGCAATGTGATCCAGCCAGAGTCAATCATGGAT
GGCACGCTCTTGCCACCCCTCAAGCCGAGAAAAGGCAAGGGGAAAAAGCA
AGCCGAGAACCAGGCACCGGTCTACGACGCGCTTGGCCCGGATGCTCTGC
GAATGTGGGTTGCAAGCAGCGACTACACGCGGGATGTCGTGATTGGCAAG
CAAGTCCTTCAGACGGTCAACACCAGCTTGCACAAGTACCGTGTGACATT
CAAGCTGCTGCTTGGTGCCTTGTCTGACTTCCGTCTGGAGGATCGTCTTC
CCTATGATCAGCTGCAGCAAGTGGATCGCATCGCTCTGAAACATCTGTCT
GACACCGTCTTGGCCTGCCAGAAGGCCTGCGAGAACTTTGAGTTTTACAA
GGCTGTGAATGCCATTAACCGCTGGGCTAACCTTGAGTTTTCTGCATTCT
ACATGGAAGCTATCAAGGACCGTCTTTACACCTACGCTGAGAACAGCACC
AGCAGAAGGGCTGCCCAGACGACCTTGTTCCACATCTACCACCACCTTCA
AGAGGTGCTGGCTCCCATCACTCCGTTGTTGGTCGAGGAGACCTGGGAGC
ATACGCCCGAGGCCATCAAGACCCACTGCGAGCATCCGCTGAAACGGATT
GTTTCCGCGCCCGCCTCTGAATGGCAGAACCAGGCTCTGGAAGCGGACTA
TCAGGATATTGTGGCCGTCAACTCCGTGGTCAAGGCGATTCAAGAAAAGG
CCCGTGGCCAGAAGCAGATGGGCTCTTCCCTGCAATCGTTCGTCCACATC
GTTCTTCCCCACGGCGCGACGGGCGAATCGGTCTTCGCGCGCCTCCAGTC
CGAGCTGCCTGATGTGTTTGTTGTCTCGTCGGTCAGCCTCGGGGCGCACG
AGGAGCCGATCCCGGAGGACATTCGCAATGCGGAGTGGCAGTATAGTGAG
GAGTACGAGCTGCCGAGTGGCGGCAGAGGAACGGTACATGTGTATACCCC
GCAAGCGAGCAAGTGTCCGCGCTGCTGGCGTTATGTGGTGCCCGAGTCAG
AGGCGGCGGAAGAGACGGTGTGTGGGCGCTGCGAGGAGGTGGTGCAAGAG
TTGGATGCATCGAGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
GO:0002161aminoacyl-tRNA editing activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004822isoleucine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006428isoleucyl-tRNA aminoacylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26870CAN33_26870Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26870-T1.cdsCAN33_26870-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26870-T1.exon1CAN33_26870-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26870-T1CAN33_26870-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092609JB
DBxrefInterPro:IPR009080
DBxrefInterPro:IPR033708
DBxrefInterPro:IPR023585
DBxrefInterPro:IPR001412
DBxrefInterPro:IPR013155
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR009008
DBxrefInterPro:IPR002300
DBxrefInterPro:IPR002301
DBxrefPFAM:PF00133
DBxrefPFAM:PF08264
Productisoleucine--tRNA ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3307516..3310533 -
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