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CAN33_26900-T1, CAN33_26900-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26900-T1
Unique NameCAN33_26900-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3324392..3325290-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26900-T1 ID=CAN33_26900-T1|Name=CAN33_26900-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=899bp|location=Sequence derived from alignment at NKJJ01000002.1:3324392..3325290- (Aspergillus niger FDAARGOS_311)
ATGGCAGACTCTACCACAGACCAACCCCAACAACCCGAACAGCAACAGCA
GCAGCAGCAATCCAACCCTTTCATCAACATCTTCACCACCTTCCGCGACG
AACTCGACGAGCACCACGACCGTCGCGAACGCATAATAAAAGCCAGTCGC
GACATCACCGCCCTCAGCAAGAAGATCATCTTTGCGTTGCAGCGGTAATC
CCCTCCCCTACCCTTACCCACCATCTTATCCCCAAAACTAACACAGATGA
TAATAATAGAGTCCGAACCCTGAACACATCCCTCCCCGCCTCTCTCACCA
AAGAAACTACCACCCGCTTCAACCAAATAACCACACACTTCACCTCCCTC
CTCCCTGACCTTCGCCCAGCACCAAACACCCACCGCTACATGCGGCAACT
CAGCCCCGCGATCCAGGAATTCATCGAAGCGTTATCCTTTCACCACTACC
TTACCACTCAGACTCTGATCACACTCGATGAAGTGAGGAAGCATCTTCCC
GAAGGAATTCTGGTTACGGAGGAGGATTATCTACTCGGGTTGTTCGATTT
GACTGGGGAGATGATGCGGTTTGCGGTTACCGGGTTGTCTGCTGGCACTT
CTACATCTGATGATGGGGGTGAAGGTGGTGGTGGTGGAGGATTGGGCCAG
GAGCAGAAAGGCATCGTGGTGGATTTGAGGGAAATGAGATGCGGGTTTGA
GGGGTTGAGTGTACCGGGGAGACATCGGGGCGTTATGTTGAGGGATATGG
GGAAGAAGGTGGACGTCATGCAGGGGAGTGTGGAGAAGGTGGAACGCGCG
GCGTATGGGATTTTGGTCAGGGGGAGGGAGAGACCGAAGGGGTGGAGGCC
GGATTTGGTGGTTGGTGGGGGTGGGATGGGTGGTGAGGATGAGTATTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3324392..3325290-

>CAN33_26900-T1 ID=CAN33_26900-T1|Name=CAN33_26900-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2277bp|location=Sequence derived from alignment at NKJJ01000002.1:3324392..3325290- (Aspergillus niger FDAARGOS_311)
GAGCAGAAAGGCATCGTGGTGGATTTGAGGGAAATGAGATGCGGGTTTGA
GGGGTTGAGTGTACCGGGGAGACATCGGGGCGTTATGTTGAGGGATATGG
GGAAGAAGGTGGACGTCATGCAGGGGAGTGTGGAGAAGGTGGAACGCGCG
GCGTATGGGATTTTGGTCAGGGGGAGGGAGAGACCGAAGGGGTGGAGGCC
GGATTTGGTGGTTGGTGGGGGTGGGATGGGTGGTGAGGATGAGTATTGAA
GTCCGAACCCTGAACACATCCCTCCCCGCCTCTCTCACCAAAGAAACTAC
CACCCGCTTCAACCAAATAACCACACACTTCACCTCCCTCCTCCCTGACC
TTCGCCCAGCACCAAACACCCACCGCTACATGCGGCAACTCAGCCCCGCG
ATCCAGGAATTCATCGAAGCGTTATCCTTTCACCACTACCTTACCACTCA
GACTCTGATCACACTCGATGAAGTGAGGAAGCATCTTCCCGAAGGAATTC
TGGTTACGGAGGAGGATTATCTACTCGGGTTGTTCGATTTGACTGGGGAG
ATGATGCGGTTTGCGATGGCAGACTCTACCACAGACCAACCCCAACAACC
CGAACAGCAACAGCAGCAGCAGCAATCCAACCCTTTCATCAACATCTTCA
CCACCTTCCGCGACGAACTCGACGAGCACCACGACCGTCGCGAACGCATA
ATAAAAGCCAGTCGCGACATCACCGCCCTCAGCAAGAAGATCATCTTTGC
GTTGCAGCGGAGCAGAAAGGCATCGTGGTGGATTTGAGGGAAATGAGATG
CGGGTTTGAGGGGTTGAGTGTACCGGGGAGACATCGGGGCGTTATGTTGA
GGGATATGGGGAAGAAGGTGGACGTCATGCAGGGGAGTGTGGAGAAGGTG
GAACGCGCGGCGTATGGGATTTTGGTCAGGGGGAGGGAGAGACCGAAGGG
GTGGAGGCCGGATTTGGTGGTTGGTGGGGGTGGGATGGGTGGTGAGGATG
AGTATTGAAGTCCGAACCCTGAACACATCCCTCCCCGCCTCTCTCACCAA
AGAAACTACCACCCGCTTCAACCAAATAACCACACACTTCACCTCCCTCC
TCCCTGACCTTCGCCCAGCACCAAACACCCACCGCTACATGCGGCAACTC
AGCCCCGCGATCCAGGAATTCATCGAAGCGTTATCCTTTCACCACTACCT
TACCACTCAGACTCTGATCACACTCGATGAAGTGAGGAAGCATCTTCCCG
AAGGAATTCTGGTTACGGAGGAGGATTATCTACTCGGGTTGTTCGATTTG
ACTGGGGAGATGATGCGGTTTGCGATGGCAGACTCTACCACAGACCAACC
CCAACAACCCGAACAGCAACAGCAGCAGCAGCAATCCAACCCTTTCATCA
ACATCTTCACCACCTTCCGCGACGAACTCGACGAGCACCACGACCGTCGC
GAACGCATAATAAAAGCCAGTCGCGACATCACCGCCCTCAGCAAGAAGAT
CATCTTTGCGTTGCAGCGGAGCAGAAAGGCATCGTGGTGGATTTGAGGGA
AATGAGATGCGGGTTTGAGGGGTTGAGTGTACCGGGGAGACATCGGGGCG
TTATGTTGAGGGATATGGGGAAGAAGGTGGACGTCATGCAGGGGAGTGTG
GAGAAGGTGGAACGCGCGGCGTATGGGATTTTGGTCAGGGGGAGGGAGAG
ACCGAAGGGGTGGAGGCCGGATTTGGTGGTTGGTGGGGGTGGGATGGGTG
GTGAGGATGAGTATTGAAGTCCGAACCCTGAACACATCCCTCCCCGCCTC
TCTCACCAAAGAAACTACCACCCGCTTCAACCAAATAACCACACACTTCA
CCTCCCTCCTCCCTGACCTTCGCCCAGCACCAAACACCCACCGCTACATG
CGGCAACTCAGCCCCGCGATCCAGGAATTCATCGAAGCGTTATCCTTTCA
CCACTACCTTACCACTCAGACTCTGATCACACTCGATGAAGTGAGGAAGC
ATCTTCCCGAAGGAATTCTGGTTACGGAGGAGGATTATCTACTCGGGTTG
TTCGATTTGACTGGGGAGATGATGCGGTTTGCGATGGCAGACTCTACCAC
AGACCAACCCCAACAACCCGAACAGCAACAGCAGCAGCAGCAATCCAACC
CTTTCATCAACATCTTCACCACCTTCCGCGACGAACTCGACGAGCACCAC
GACCGTCGCGAACGCATAATAAAAGCCAGTCGCGACATCACCGCCCTCAG
CAAGAAGATCATCTTTGCGTTGCAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26900CAN33_26900Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26900-T1CAN33_26900-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26900-T1.cdsCAN33_26900-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26900-T1.exon3CAN33_26900-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_26900-T1.exon2CAN33_26900-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_26900-T1.exon1CAN33_26900-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036081
DBxrefInterPro:IPR016069
DBxrefInterPro:IPR002848
DBxrefInterPro:IPR016068
DBxrefPFAM:PF01997
ProductTranslin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3324392..3325290 -
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