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CAN33_2695-T1, CAN33_2695-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_2695-T1
Unique NameCAN33_2695-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:1660166..1660989+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_2695-T1 ID=CAN33_2695-T1|Name=CAN33_2695-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=824bp|location=Sequence derived from alignment at NKJJ01000004.1:1660166..1660989+ (Aspergillus niger FDAARGOS_311)
ATGGCGAACAACAGACTCCAATACGTGAGTATAATTGAATCTCTGAATAT
TAAATGAAATGGAATACTGATCTATTGTTCTTTTTCTCTGCAGCGCCGCC
GGAACCCGTACGTTTGAATTTTCCCTCTGTTTCTACCCCCATCGTGCCTT
TGTCACTCCCACCAAAATTTTTGTTATCGGTCGCTACAGTGCAATAACGA
TTTGTCCGATTTCGACGCGATGAACCGCTGCTTTGCTCTTGAAATTTTAT
ATACGCCGAGATATCTATGAATAGGGTATTGATGGATTTTGTTCTTCAGG
TACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGA
GCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTG
ACTGTGGCATCAAGCTCCCTGGTGTGAGTGCTCCCGAATGATTCATGTTG
AATGGTGGTGGTGTGTGAACGGGCTGCAGGATGGATGAAGGGTGGAGTGT
GTGTGCGTGGGCGATCGCTTCGACCAACGCACAAGGAAACGACAATATTC
AACACCACCACCACCATTCGCGATACAAAGGATAGGAAGGAAGAGCAAAA
AATGGCTGATGGTCATCTTTCCACCGATATAGGTCCCCGCCCTCCGCCCC
CGCGAGTACGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTA
CGGTGGTTCCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTT
TCCTGATTGAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAG
GAGAAGGCTGCCGGCAAGCGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:1660166..1660989+

>CAN33_2695-T1 ID=CAN33_2695-T1|Name=CAN33_2695-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1416bp|location=Sequence derived from alignment at NKJJ01000004.1:1660166..1660989+ (Aspergillus niger FDAARGOS_311)
ATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACACGCG
GTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGTTACC
TTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGGCATC
AAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGATCTC
CCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGCGCTG
GTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCAGAAG
ATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCAAGCG
CTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTACAACA
CGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCTCCGT
TACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACTGTGG
CATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCTCAGA
TCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCGCTGC
GCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGGAGCA
GAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCCGGCA
AGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCCGTAC
AACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTGAGCT
CCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGTGACT
GTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTACGCT
CAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTTCCCG
CTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATTGAGG
AGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGCTGCC
GGCAAGCGCTAAATGGCGAACAACAGACTCCAATACCGCCGCCGGAACCC
GTACAACACGCGGTCCAACCAGGTCCGCATCATCAAGACCCCCGGCGGTG
AGCTCCGTTACCTTCACATCAAGAAGAAGGGCACTGCTCCCAAGTGCGGT
GACTGTGGCATCAAGCTCCCTGGTGTCCCCGCCCTCCGCCCCCGCGAGTA
CGCTCAGATCTCCCGCCCCAAGAAGAACGTCAGCCGCGCCTACGGTGGTT
CCCGCTGCGCTGGTTGCGTCAAGGACCGCATCGTCCGTGCTTTCCTGATT
GAGGAGCAGAAGATCGTCAAGAAGGTCCTCAAGGAGTCTCAGGAGAAGGC
TGCCGGCAAGCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL34ACAN33_2695Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2695-T1.exon1CAN33_2695-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_2695-T1.exon2CAN33_2695-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_2695-T1.exon3CAN33_2695-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_2695-T1.exon4CAN33_2695-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2695-T1.cdsCAN33_2695-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_2695-T1CAN33_2695-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018065
DBxrefInterPro:IPR038562
DBxrefInterPro:IPR008195
DBxrefPFAM:PF01199
Product60S ribosomal protein L34A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:1660166..1660989 +
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