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CAN33_26950-T1, CAN33_26950-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_26950-T1
Unique NameCAN33_26950-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3345617..3346864-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_26950-T1 ID=CAN33_26950-T1|Name=CAN33_26950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1248bp|location=Sequence derived from alignment at NKJJ01000002.1:3345617..3346864- (Aspergillus niger FDAARGOS_311)
ATGTCACTATTGGCCCTACCCACCGAATTATTACAGCAGGTCGCTGCACT
CCTCCCGGATGGACATCTCTCCAGTCTACTGCAGGTGAACCTCCATCTAT
ACGATGTACTGCTTCCATGTCTCTACCAACGGCGTCACAAGTCTCGAGAC
TTTGCACGTAGCTGGCCAGCAGGTTTCATGCGAGCCATTGCGACTGGGAA
TGTCCAAGGCACACAGAACTTCCTCCACTACGGCGCCGACGTGAACCTCG
TATGCAGTCATCACTTTCTGCATCAAGCAAAAGTCCCTATTGAGCCCTGG
TTTGATTTGCAGACGCCGCTTAACGTGGCAGCGAGCATCGGGAATGACAC
GTTGGTAATGATGTTGCTAGGTCACGGGGCTGAAATCAACGGATTGAAGC
ACCATGATGGGGTTCGCTTTAGACACACCCAGCCAGCTATCGCGGATGCT
CTATTATCAGGACATATAAGTACTGTTCGACTCCTGCTTGAACATGGCTC
AGATATCCAAGACTGCCATATAGAGGCTGGTCGGCTAGTCCTCTACGCCG
TTAATACAGGCCAGTTAACGATGCTCCAGCTCCTGAAGGAGTTCGGAGCT
GATCTAAACATCGCTTATAATCACGTGGAACCCCTACACAAGGCAGCCTG
CTTGCGACAAATATCGACTGATATAGTACGGTTCCTGCTTGACCATGGCG
CGGAAATCACCTCTTCTGATCGTCGTCATAGACGGTTTATGGAAGATGTG
ATGAGAGGAGGGACCATCGATACTGCCCGGCTTCTGCTAGAACGCGGAGC
GGTATTTCCCCAGGATGGATTTCATTCGGCTATTGCCTGCGGAACGCCTG
ACTTTATCCGCCTGCTCATTGAATATGGTCACAAGCCTGATATCGAGTGG
CTCAAGTGGGCTATTAGGAGTCGGCGGCTCGATCTATTGCAGCTACTTCT
TGAAGAGGGCGTTGGTCTCTATTCCAGGGACGCTAGAGGATCCACAATCC
TGCATTATGCGGTAAAGTGGTGCAGCTATGAAAGCCCCACACATGGAATG
TCGCAAGCGATATGCGGGATTCCTGCACAGACGCCACTTGTGCGCCGTAT
CAAAAACATCGAGCCTCAAACGGTATCACGTCCATGTAGTATCCAGGGCA
CCTCTAGGGGTACTTCGGAAGACATCCTGCGCTATGTCATTCATAGAGGG
GCGGAGATCAATGCCTTGGATGGTAATGGTCGGACCCGCTCGATATAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3345617..3346864-

>CAN33_26950-T1 ID=CAN33_26950-T1|Name=CAN33_26950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1248bp|location=Sequence derived from alignment at NKJJ01000002.1:3345617..3346864- (Aspergillus niger FDAARGOS_311)
ATGTCACTATTGGCCCTACCCACCGAATTATTACAGCAGGTCGCTGCACT
CCTCCCGGATGGACATCTCTCCAGTCTACTGCAGGTGAACCTCCATCTAT
ACGATGTACTGCTTCCATGTCTCTACCAACGGCGTCACAAGTCTCGAGAC
TTTGCACGTAGCTGGCCAGCAGGTTTCATGCGAGCCATTGCGACTGGGAA
TGTCCAAGGCACACAGAACTTCCTCCACTACGGCGCCGACGTGAACCTCG
TATGCAGTCATCACTTTCTGCATCAAGCAAAAGTCCCTATTGAGCCCTGG
TTTGATTTGCAGACGCCGCTTAACGTGGCAGCGAGCATCGGGAATGACAC
GTTGGTAATGATGTTGCTAGGTCACGGGGCTGAAATCAACGGATTGAAGC
ACCATGATGGGGTTCGCTTTAGACACACCCAGCCAGCTATCGCGGATGCT
CTATTATCAGGACATATAAGTACTGTTCGACTCCTGCTTGAACATGGCTC
AGATATCCAAGACTGCCATATAGAGGCTGGTCGGCTAGTCCTCTACGCCG
TTAATACAGGCCAGTTAACGATGCTCCAGCTCCTGAAGGAGTTCGGAGCT
GATCTAAACATCGCTTATAATCACGTGGAACCCCTACACAAGGCAGCCTG
CTTGCGACAAATATCGACTGATATAGTACGGTTCCTGCTTGACCATGGCG
CGGAAATCACCTCTTCTGATCGTCGTCATAGACGGTTTATGGAAGATGTG
ATGAGAGGAGGGACCATCGATACTGCCCGGCTTCTGCTAGAACGCGGAGC
GGTATTTCCCCAGGATGGATTTCATTCGGCTATTGCCTGCGGAACGCCTG
ACTTTATCCGCCTGCTCATTGAATATGGTCACAAGCCTGATATCGAGTGG
CTCAAGTGGGCTATTAGGAGTCGGCGGCTCGATCTATTGCAGCTACTTCT
TGAAGAGGGCGTTGGTCTCTATTCCAGGGACGCTAGAGGATCCACAATCC
TGCATTATGCGGTAAAGTGGTGCAGCTATGAAAGCCCCACACATGGAATG
TCGCAAGCGATATGCGGGATTCCTGCACAGACGCCACTTGTGCGCCGTAT
CAAAAACATCGAGCCTCAAACGGTATCACGTCCATGTAGTATCCAGGGCA
CCTCTAGGGGTACTTCGGAAGACATCCTGCGCTATGTCATTCATAGAGGG
GCGGAGATCAATGCCTTGGATGGTAATGGTCGGACCCGCTCGATATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_26950CAN33_26950Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26950-T1.cdsCAN33_26950-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26950-T1.exon1CAN33_26950-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_26950-T1CAN33_26950-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13637
DBxrefPFAM:PF12796
ProductAnkyrin repeats (3 copies) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3345617..3346864 -
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