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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3384612..3385881- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27010-T1 ID=CAN33_27010-T1|Name=CAN33_27010-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1270bp|location=Sequence derived from alignment at NKJJ01000002.1:3384612..3385881- (Aspergillus niger FDAARGOS_311)
ATGGATTCCAGCTTAAGCATTCCGGTCAAAGATGAGTCCCTTAGCCATAC
TCTTTACGAAGCAAGTAGCCCATACCTTACCACCCATCAGCAGGGGCCCA
CCCAGGGTGATCTGACGGACAGTGTCGTCCGCAACAACGACAACCGCAAC
TTCATCAGCAGCCTCTCGACGAAAAGCCCTTTCCATCTAGCATCATCCGA
AGATCGCTCCACACAAAGTGCCCCTCTTGGATCGGATCAACGACATACAG
ATAGCCCGCTCTTTGCTAAGCCAGAGGTCTTCTATGAAGTGACTGGGAGT
GACCGCTATGTTGCTCAGCCCATACTCGATGCAAAGCTTCGTAAAGGCTT
CTTCGAAGTCAACGGCAAATGGACTTTGTACCATCGCAACTACTTTTCAG
TTGAGTGTGCCGTTTCCTTTCCTCGGGATATCGAAAATGGGCTGTACATA
CAGCGCGGTAGAGCAGAACTTCAGCAAATCCACGGCTTTTCGGTGAAACT
TTTGGCGAGCAAGGATGGTGAAATCCGTGAATTGGTACAGCACACACCTA
AAAGAGTTCGAAAGAGGGAAGCCGCATCGGAAGAGATAATTTGGTTCCCA
CTCATCGCCAATGCAACTGGTAGAGAGGCAGCGGACCGATCTGAAGAAGT
CAATATCCCCCGCAACGTCAAGTCGTCCAATAATAACGCAGGAGAAAGCA
GACTATTCTCTCACACTTTCGAGAGAATACAGTTTGAGAAGGCTACGCCA
GACAATATCAAAAGACGCTCACAGAAGCAACACTTTAATCTCGTGATTGA
GCTTAATGCCCAGATCTCGGGCGGGGAGCCCGATCGAAACTTGCACTGGC
TGAGGATTGCCCGACAAACCTCAGAACCATTCATCATACGTGGTCAACCC
GCAGGTCATTGCAAGGGGGGAAGAAGGGGTGATCACACTTCCATTTTTTA
TGGTGGTGATGGCATGCGTCGAGGTAGTCTCACAGCGTCACGTCCGTTTC
TGAGAGATTTTGAGTGGCGTACAGACCGTAGGACCAACGCTGAAGAGAGC
AATCATCATCCGCCTACTGCTCAGCGGCTCCGTGGACGCCAACGCGCAGG
ACAAAAACGGCTATACAGTGCTGGCAGTGGCCCCCAGGGCAAGGTATACA
GTAATCTTGCATCTGCTGCGCGACGCGCACGTGGAGGTGAGTTGGGATGA
CTGGGACGGCCGGCACCCCCTGCCCAGGCAGCGATCGCAGGCTCGACGAC
GAAAGTCCGGCTTCTGCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3384612..3385881- >CAN33_27010-T1 ID=CAN33_27010-T1|Name=CAN33_27010-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2286bp|location=Sequence derived from alignment at NKJJ01000002.1:3384612..3385881- (Aspergillus niger FDAARGOS_311)
GACCAACGCTGAAGAGAGCAATCATCATCCGCCTACTGCTCAGCGGCTCC
GTGGACGCCAACGCGCAGGACAAAAACGGCTATACAGTGCTGGCAGTGGC
CCCCAGGGCAAGGTATACAGTAATCTTGCATCTGCTGCGCGACGCGCACG
TGGAGGTGAGTTGGGATGACTGGGACGGCCGGCACCCCCTGCCCAGGCAG
CGATCGCAGGCTCGACGACGAAAGTCCGGCTTCTGCTAGATGGATTCCAG
CTTAAGCATTCCGGTCAAAGATGAGTCCCTTAGCCATACTCTTTACGAAG
CAAGTAGCCCATACCTTACCACCCATCAGCAGGGGCCCACCCAGGGTGAT
CTGACGGACAGTGTCGTCCGCAACAACGACAACCGCAACTTCATCAGCAG
CCTCTCGACGAAAAGCCCTTTCCATCTAGCATCATCCGAAGATCGCTCCA
CACAAAGTGCCCCTCTTGGATCGGATCAACGACATACAGATAGCCCGCTC
TTTGCTAAGCCAGAGGTCTTCTATGAAGTGACTGGGAGTGACCGCTATGT
TGCTCAGCCCATACTCGATGCAAAGCTTCGTAAAGGCTTCTTCGAAGTCA
ACGGCAAATGGACTTTGTACCATCGCAACTACTTTTCAGTTGAGTGTGCC
GTTTCCTTTCCTCGGGATATCGAAAATGGGCTGTACATACAGCGCGGTAG
AGCAGAACTTCAGCAAATCCACGGCTTTTCGGTGAAACTTTTGGCGAGCA
AGGATGGTGAAATCCGTGAATTGGTACAGCACACACCTAAAAGAGTTCGA
AAGAGGGAAGCCGCATCGGAAGAGATAATTTGGTTCCCACTCATCGCCAA
TGCAACTGGTAGAGAGGCAGCGGACCGATCTGAAGAAGTCAATATCCCCC
GCAACGTCAAGTCGTCCAATAATAACGCAGGAGAAAGCAGACTATTCTCT
CACACTTTCGAGAGAATACAGTTTGAGAAGGCTACGCCAGACAATATCAA
AAGACGCTCACAGAAGCAACACTTTAATCTCGTGATTGAGCTTAATGCCC
AGATCTCGGGCGGGGAGCCCGATCGAAACTTGCACTGGCTGAGGATTGCC
CGACAAACCTCAGAACCATTCATCATACGTGGTCAACCCGCAGGACCAAC
GCTGAAGAGAGCAATCATCATCCGCCTACTGCTCAGCGGCTCCGTGGACG
CCAACGCGCAGGACAAAAACGGCTATACAGTGCTGGCAGTGGCCCCCAGG
GCAAGGTATACAGTAATCTTGCATCTGCTGCGCGACGCGCACGTGGAGGT
GAGTTGGGATGACTGGGACGGCCGGCACCCCCTGCCCAGGCAGCGATCGC
AGGCTCGACGACGAAAGTCCGGCTTCTGCTAGATGGATTCCAGCTTAAGC
ATTCCGGTCAAAGATGAGTCCCTTAGCCATACTCTTTACGAAGCAAGTAG
CCCATACCTTACCACCCATCAGCAGGGGCCCACCCAGGGTGATCTGACGG
ACAGTGTCGTCCGCAACAACGACAACCGCAACTTCATCAGCAGCCTCTCG
ACGAAAAGCCCTTTCCATCTAGCATCATCCGAAGATCGCTCCACACAAAG
TGCCCCTCTTGGATCGGATCAACGACATACAGATAGCCCGCTCTTTGCTA
AGCCAGAGGTCTTCTATGAAGTGACTGGGAGTGACCGCTATGTTGCTCAG
CCCATACTCGATGCAAAGCTTCGTAAAGGCTTCTTCGAAGTCAACGGCAA
ATGGACTTTGTACCATCGCAACTACTTTTCAGTTGAGTGTGCCGTTTCCT
TTCCTCGGGATATCGAAAATGGGCTGTACATACAGCGCGGTAGAGCAGAA
CTTCAGCAAATCCACGGCTTTTCGGTGAAACTTTTGGCGAGCAAGGATGG
TGAAATCCGTGAATTGGTACAGCACACACCTAAAAGAGTTCGAAAGAGGG
AAGCCGCATCGGAAGAGATAATTTGGTTCCCACTCATCGCCAATGCAACT
GGTAGAGAGGCAGCGGACCGATCTGAAGAAGTCAATATCCCCCGCAACGT
CAAGTCGTCCAATAATAACGCAGGAGAAAGCAGACTATTCTCTCACACTT
TCGAGAGAATACAGTTTGAGAAGGCTACGCCAGACAATATCAAAAGACGC
TCACAGAAGCAACACTTTAATCTCGTGATTGAGCTTAATGCCCAGATCTC
GGGCGGGGAGCCCGATCGAAACTTGCACTGGCTGAGGATTGCCCGACAAA
CCTCAGAACCATTCATCATACGTGGTCAACCCGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008967 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR037141 |
| DBxref | InterPro:IPR024061 |
| DBxref | PFAM:PF05224 |
| Product | NDT80 / PhoG like DNA-binding family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3384612..3385881 - |
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