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CAN33_27045-T1, CAN33_27045-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27045-T1
Unique NameCAN33_27045-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3408244..3410105-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27045-T1 ID=CAN33_27045-T1|Name=CAN33_27045-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1862bp|location=Sequence derived from alignment at NKJJ01000002.1:3408244..3410105- (Aspergillus niger FDAARGOS_311)
ATGGAGCCTTCGGGCGAGGAGCCGAATGATGATGCAAAGGCGTCCAGCAA
TGCGGAGTCTGTCGAGGACTATGAAACCTTGAAATATCAACTGCTCGGAC
CGTCTTTGACCAAAGCGGGTCAGGATGCCGTGGACCAGCGAAAGGTGAGC
AGTATGCCACAACGTTCTAGGATGATAGCTAAGGTTAGCAGGTCTCGGAG
ATTATTTATAATGCCTCCAAAGGATCCAAATTCTTCAATCATGAGCAAAA
CCGAGACAAGGTCTTGACAGTCAAGATTGAACGCATCCTGAAAGAGAAAG
CCCGTCTCGAGAAACTAGATCTGTCGGCTGATCTGCGACGCGCTGACCAG
CTTCTTGCTGAGCTAGAACTGACGCGAGATCTGTCGCAGCATGTTGTTCA
CGTCGACTGTGATGCTTTCTTTGCTGCAGTGGAAGAGCTCGACCGTCCAG
AATTGAAGACTGTCCCTATGGCGGTCGGCAAGGGCGTGCTGACGACCTGC
AACTATGAGGCACGAAAGTTTGGCTGTCGGAGCGGCATGGCATCATTCGT
GGCGAAGAAACTGTGTCCTCAGCTGATCTGTTTGCCTCAGAACTACGAAA
AGTATACTGCAAAGGCAAAGGAGATCCGCGCCATTTTCGCACAGTATGAT
CCTACATTTGAGAGCGCTAGTATTGACGAGGCTTATCTCAATCTGACTGC
ATATTGTACCGAAAATGAGCTTGATCCCGAGGAGGCGGTCCAGCGCATGC
GGGCAGAGGTCTTGGAAAAGACCAAGATTTCAGTTTCTGCTGGCATTGCA
GCAAATGCAAAAATAGCCAAGATCGCATCCAACAAGAATAAGCCGAACGG
CCAATTTTGCGTACCTAACGAGAGAGAAGCGATCATGAAGTTCATGGAGG
AGCTACCCGTCCGCAAGGTGAACGGTGTTGGTCGCGTCTTCGAACGTGAA
CTTGATGCGATCGGTATTAAATCATGCGGCGACATTTATCCGCAGCGTGC
CATTTTGACCAAGTTATTCGGAGAAAAAGCGTTTCATTTCTTGGTGCAAT
GCTACCTCGGCTTAGGTAGAACGAAAATCCAGCCGGTGGAGAACTATGAG
CGCAAGAGTGTGGGAACTGAGAGGACGTTCCACGAGATCGGGAATAAAGA
GGAGTTCAGAGCCAAGCTGTGGTCGATAGCCGAGGAGCTTGAGAAAGATC
TGGCGCGAACTGAGTTCAAGGGGCGGACACTGGTTCTCAAAGTAAAGCTC
GCTACATTTGAGGTGTTGTCACGACAATGCCAGCCTCCACGGGCGGTCTC
GACTGCCAAAGATCTGTATGCGTTCTCACTTCCGATGCTGGAGAAGCTTG
AAAAGGAAATGCCTGATCTGAAAATGCGCCTGCTTGGTCTCCGGTGCACC
AACCTTGTGAGCACAAAGAAAGTTGGGATCGAGCTCTTCGGCTTCACTTC
GCGGCCGAAGCCTGCTTCAGACACGTCGACCGATCCTCCGGTTGAGCAGG
AGATCGAGACAGAGGAGGCCTTTGAGAAAGCGGCACGGGAGGAACTACAA
GAGGAGCTCGATGATTTGGAGAAGCTGAGCCAGGAGGTATCCGAGGCCGC
AGAATTGAAGCAGGATGGGAAAGGAGTAGATGCATCGCAGCCTGTATATT
GGGATTGCCCGATTTGTTCTCGACCTCAGGTGGCGGAAGATCGTACATTC
AATGACCATGTGGACTACTGCCTATCACGACAGACGATCAAGGAGGCTGT
CCAAGGTGCCTCGAGTGATGTTCCGCCTGAGCCTCTGGCTGCATCGAAGA
CACGAAAGCGAAGAGCGACGGAATCACCGGATCCGCGACAAAAACGGTTG
TTCTTTTCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3408244..3410105-

>CAN33_27045-T1 ID=CAN33_27045-T1|Name=CAN33_27045-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3630bp|location=Sequence derived from alignment at NKJJ01000002.1:3408244..3410105- (Aspergillus niger FDAARGOS_311)
GTCTCGGAGATTATTTATAATGCCTCCAAAGGATCCAAATTCTTCAATCA
TGAGCAAAACCGAGACAAGGTCTTGACAGTCAAGATTGAACGCATCCTGA
AAGAGAAAGCCCGTCTCGAGAAACTAGATCTGTCGGCTGATCTGCGACGC
GCTGACCAGCTTCTTGCTGAGCTAGAACTGACGCGAGATCTGTCGCAGCA
TGTTGTTCACGTCGACTGTGATGCTTTCTTTGCTGCAGTGGAAGAGCTCG
ACCGTCCAGAATTGAAGACTGTCCCTATGGCGGTCGGCAAGGGCGTGCTG
ACGACCTGCAACTATGAGGCACGAAAGTTTGGCTGTCGGAGCGGCATGGC
ATCATTCGTGGCGAAGAAACTGTGTCCTCAGCTGATCTGTTTGCCTCAGA
ACTACGAAAAGTATACTGCAAAGGCAAAGGAGATCCGCGCCATTTTCGCA
CAGTATGATCCTACATTTGAGAGCGCTAGTATTGACGAGGCTTATCTCAA
TCTGACTGCATATTGTACCGAAAATGAGCTTGATCCCGAGGAGGCGGTCC
AGCGCATGCGGGCAGAGGTCTTGGAAAAGACCAAGATTTCAGTTTCTGCT
GGCATTGCAGCAAATGCAAAAATAGCCAAGATCGCATCCAACAAGAATAA
GCCGAACGGCCAATTTTGCGTACCTAACGAGAGAGAAGCGATCATGAAGT
TCATGGAGGAGCTACCCGTCCGCAAGGTGAACGGTGTTGGTCGCGTCTTC
GAACGTGAACTTGATGCGATCGGTATTAAATCATGCGGCGACATTTATCC
GCAGCGTGCCATTTTGACCAAGTTATTCGGAGAAAAAGCGTTTCATTTCT
TGGTGCAATGCTACCTCGGCTTAGGTAGAACGAAAATCCAGCCGGTGGAG
AACTATGAGCGCAAGAGTGTGGGAACTGAGAGGACGTTCCACGAGATCGG
GAATAAAGAGGAGTTCAGAGCCAAGCTGTGGTCGATAGCCGAGGAGCTTG
AGAAAGATCTGGCGCGAACTGAGTTCAAGGGGCGGACACTGGTTCTCAAA
GTAAAGCTCGCTACATTTGAGGTGTTGTCACGACAATGCCAGCCTCCACG
GGCGGTCTCGACTGCCAAAGATCTGTATGCGTTCTCACTTCCGATGCTGG
AGAAGCTTGAAAAGGAAATGCCTGATCTGAAAATGCGCCTGCTTGGTCTC
CGGTGCACCAACCTTGTGAGCACAAAGAAAGTTGGGATCGAGCTCTTCGG
CTTCACTTCGCGGCCGAAGCCTGCTTCAGACACGTCGACCGATCCTCCGG
TTGAGCAGGAGATCGAGACAGAGGAGGCCTTTGAGAAAGCGGCACGGGAG
GAACTACAAGAGGAGCTCGATGATTTGGAGAAGCTGAGCCAGGAGGTATC
CGAGGCCGCAGAATTGAAGCAGGATGGGAAAGGAGTAGATGCATCGCAGC
CTGTATATTGGGATTGCCCGATTTGTTCTCGACCTCAGGTGGCGGAAGAT
CGTACATTCAATGACCATGTGGACTACTGCCTATCACGACAGACGATCAA
GGAGGCTGTCCAAGGTGCCTCGAGTGATGTTCCGCCTGAGCCTCTGGCTG
CATCGAAGACACGAAAGCGAAGAGCGACGGAATCACCGGATCCGCGACAA
AAACGGTTGTTCTTTTCGTGAATGGAGCCTTCGGGCGAGGAGCCGAATGA
TGATGCAAAGGCGTCCAGCAATGCGGAGTCTGTCGAGGACTATGAAACCT
TGAAATATCAACTGCTCGGACCGTCTTTGACCAAAGCGGGTCAGGATGCC
GTGGACCAGCGAAAGGTCTCGGAGATTATTTATAATGCCTCCAAAGGATC
CAAATTCTTCAATCATGAGCAAAACCGAGACAAGGTCTTGACAGTCAAGA
TTGAACGCATCCTGAAAGAGAAAGCCCGTCTCGAGAAACTAGATCTGTCG
GCTGATCTGCGACGCGCTGACCAGCTTCTTGCTGAGCTAGAACTGACGCG
AGATCTGTCGCAGCATGTTGTTCACGTCGACTGTGATGCTTTCTTTGCTG
CAGTGGAAGAGCTCGACCGTCCAGAATTGAAGACTGTCCCTATGGCGGTC
GGCAAGGGCGTGCTGACGACCTGCAACTATGAGGCACGAAAGTTTGGCTG
TCGGAGCGGCATGGCATCATTCGTGGCGAAGAAACTGTGTCCTCAGCTGA
TCTGTTTGCCTCAGAACTACGAAAAGTATACTGCAAAGGCAAAGGAGATC
CGCGCCATTTTCGCACAGTATGATCCTACATTTGAGAGCGCTAGTATTGA
CGAGGCTTATCTCAATCTGACTGCATATTGTACCGAAAATGAGCTTGATC
CCGAGGAGGCGGTCCAGCGCATGCGGGCAGAGGTCTTGGAAAAGACCAAG
ATTTCAGTTTCTGCTGGCATTGCAGCAAATGCAAAAATAGCCAAGATCGC
ATCCAACAAGAATAAGCCGAACGGCCAATTTTGCGTACCTAACGAGAGAG
AAGCGATCATGAAGTTCATGGAGGAGCTACCCGTCCGCAAGGTGAACGGT
GTTGGTCGCGTCTTCGAACGTGAACTTGATGCGATCGGTATTAAATCATG
CGGCGACATTTATCCGCAGCGTGCCATTTTGACCAAGTTATTCGGAGAAA
AAGCGTTTCATTTCTTGGTGCAATGCTACCTCGGCTTAGGTAGAACGAAA
ATCCAGCCGGTGGAGAACTATGAGCGCAAGAGTGTGGGAACTGAGAGGAC
GTTCCACGAGATCGGGAATAAAGAGGAGTTCAGAGCCAAGCTGTGGTCGA
TAGCCGAGGAGCTTGAGAAAGATCTGGCGCGAACTGAGTTCAAGGGGCGG
ACACTGGTTCTCAAAGTAAAGCTCGCTACATTTGAGGTGTTGTCACGACA
ATGCCAGCCTCCACGGGCGGTCTCGACTGCCAAAGATCTGTATGCGTTCT
CACTTCCGATGCTGGAGAAGCTTGAAAAGGAAATGCCTGATCTGAAAATG
CGCCTGCTTGGTCTCCGGTGCACCAACCTTGTGAGCACAAAGAAAGTTGG
GATCGAGCTCTTCGGCTTCACTTCGCGGCCGAAGCCTGCTTCAGACACGT
CGACCGATCCTCCGGTTGAGCAGGAGATCGAGACAGAGGAGGCCTTTGAG
AAAGCGGCACGGGAGGAACTACAAGAGGAGCTCGATGATTTGGAGAAGCT
GAGCCAGGAGGTATCCGAGGCCGCAGAATTGAAGCAGGATGGGAAAGGAG
TAGATGCATCGCAGCCTGTATATTGGGATTGCCCGATTTGTTCTCGACCT
CAGGTGGCGGAAGATCGTACATTCAATGACCATGTGGACTACTGCCTATC
ACGACAGACGATCAAGGAGGCTGTCCAAGGTGCCTCGAGTGATGTTCCGC
CTGAGCCTCTGGCTGCATCGAAGACACGAAAGCGAAGAGCGACGGAATCA
CCGGATCCGCGACAAAAACGGTTGTTCTTTTCGTGAATGGAGCCTTCGGG
CGAGGAGCCGAATGATGATGCAAAGGCGTCCAGCAATGCGGAGTCTGTCG
AGGACTATGAAACCTTGAAATATCAACTGCTCGGACCGTCTTTGACCAAA
GCGGGTCAGGATGCCGTGGACCAGCGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0003684damaged DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27045CAN33_27045Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27045-T1CAN33_27045-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27045-T1.cdsCAN33_27045-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27045-T1.exon2CAN33_27045-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_27045-T1.exon1CAN33_27045-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.15
DBxrefInterPro:IPR022880
DBxrefInterPro:IPR036775
DBxrefInterPro:IPR017961
DBxrefInterPro:IPR001126
DBxrefInterPro:IPR024728
DBxrefPFAM:PF11798
DBxrefPFAM:PF11799
DBxrefPFAM:PF00817
ProductimpB/mucB/samB family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3408244..3410105 -
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