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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3478018..3478921- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27160-T1 ID=CAN33_27160-T1|Name=CAN33_27160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=904bp|location=Sequence derived from alignment at NKJJ01000002.1:3478018..3478921- (Aspergillus niger FDAARGOS_311)
ATGAGTCTCTTCATGCGAGCAAACGATGCTCTCAACGTCAACCCGATTGC
CGGCGTTGATGAAGCCCTATCTGTGCATGGATCCGACTGGCTTTGGGCTA
TCACAGCCATCTATATTGTATCATTCGTGAGTCATTTTCCCTCTGTACTC
TAGTTTTGATTTCACCTATTAACATTAAACATAGCTTGGCCTCCTGACAA
TGTCCTTCTCCGGAAAAGAAAGTGAACGAGTATTCCACTACCTCTTCACC
TTTCTCCTACTAGTCGGCGCAATAACCTACTACGCCCAAGCCTCTGATCT
CGGCTGGAGCGCTGTGGAACAAGTCAACAATCTCGACAACGGAGCAATAC
GCCAGATGTTCTGGGCGAAATACATCAACTGGGTTGTTGCATTCCCTTCG
CTCGCTCTCGCACTCGGCCTCGTCTCAGGGGTTTCATGGACGACCATGAT
CTGCAATATCGCACTTGCCTGCTATTGGGTCACCAGCTACCTCGTGTCCG
CATACACGCCCTCAACCTACAAATGGGGGTTTTTCGCTTTTGGAACCCTA
TCCTGGGTGATTCTCGCCATGAGCACTATAAACGAGAGTCGGGAAGCCGC
GCAACGGCTTGGGGTGGATCGTGATTACATTATTCTCTCTGGGTGGTGCA
ACCTGCTTTGGTTGTTGTACCCTGTGGCCTGGGGTTTGAGTGATGGGGGG
AATGTTATTGGGATCACAGAAGCCACTATTTTCTTTGGGATTCTTGATAT
CCTCATGGTGCCGCTTTTGACATTTATGTTTCTTTTCTTTGCACGGAATT
GGGATTATCAGAAGTTGAGTATTGCCTTCAGTGATGCGAGGCCGAGCCGG
GAGGCACAGAGTTCTAAGCAGCAGCAGGTGGCAGAGAGTAGTCCTTCTGC
TTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3478018..3478921- >CAN33_27160-T1 ID=CAN33_27160-T1|Name=CAN33_27160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1692bp|location=Sequence derived from alignment at NKJJ01000002.1:3478018..3478921- (Aspergillus niger FDAARGOS_311)
CTTGGCCTCCTGACAATGTCCTTCTCCGGAAAAGAAAGTGAACGAGTATT
CCACTACCTCTTCACCTTTCTCCTACTAGTCGGCGCAATAACCTACTACG
CCCAAGCCTCTGATCTCGGCTGGAGCGCTGTGGAACAAGTCAACAATCTC
GACAACGGAGCAATACGCCAGATGTTCTGGGCGAAATACATCAACTGGGT
TGTTGCATTCCCTTCGCTCGCTCTCGCACTCGGCCTCGTCTCAGGGGTTT
CATGGACGACCATGATCTGCAATATCGCACTTGCCTGCTATTGGGTCACC
AGCTACCTCGTGTCCGCATACACGCCCTCAACCTACAAATGGGGGTTTTT
CGCTTTTGGAACCCTATCCTGGGTGATTCTCGCCATGAGCACTATAAACG
AGAGTCGGGAAGCCGCGCAACGGCTTGGGGTGGATCGTGATTACATTATT
CTCTCTGGGTGGTGCAACCTGCTTTGGTTGTTGTACCCTGTGGCCTGGGG
TTTGAGTGATGGGGGGAATGTTATTGGGATCACAGAAGCCACTATTTTCT
TTGGGATTCTTGATATCCTCATGGTGCCGCTTTTGACATTTATGTTTCTT
TTCTTTGCACGGAATTGGGATTATCAGAAGTTGAGTATTGCCTTCAGTGA
TGCGAGGCCGAGCCGGGAGGCACAGAGTTCTAAGCAGCAGCAGGTGGCAG
AGAGTAGTCCTTCTGCTTAGATGAGTCTCTTCATGCGAGCAAACGATGCT
CTCAACGTCAACCCGATTGCCGGCGTTGATGAAGCCCTATCTGTGCATGG
ATCCGACTGGCTTTGGGCTATCACAGCCATCTATATTGTATCATTCCTTG
GCCTCCTGACAATGTCCTTCTCCGGAAAAGAAAGTGAACGAGTATTCCAC
TACCTCTTCACCTTTCTCCTACTAGTCGGCGCAATAACCTACTACGCCCA
AGCCTCTGATCTCGGCTGGAGCGCTGTGGAACAAGTCAACAATCTCGACA
ACGGAGCAATACGCCAGATGTTCTGGGCGAAATACATCAACTGGGTTGTT
GCATTCCCTTCGCTCGCTCTCGCACTCGGCCTCGTCTCAGGGGTTTCATG
GACGACCATGATCTGCAATATCGCACTTGCCTGCTATTGGGTCACCAGCT
ACCTCGTGTCCGCATACACGCCCTCAACCTACAAATGGGGGTTTTTCGCT
TTTGGAACCCTATCCTGGGTGATTCTCGCCATGAGCACTATAAACGAGAG
TCGGGAAGCCGCGCAACGGCTTGGGGTGGATCGTGATTACATTATTCTCT
CTGGGTGGTGCAACCTGCTTTGGTTGTTGTACCCTGTGGCCTGGGGTTTG
AGTGATGGGGGGAATGTTATTGGGATCACAGAAGCCACTATTTTCTTTGG
GATTCTTGATATCCTCATGGTGCCGCTTTTGACATTTATGTTTCTTTTCT
TTGCACGGAATTGGGATTATCAGAAGTTGAGTATTGCCTTCAGTGATGCG
AGGCCGAGCCGGGAGGCACAGAGTTCTAAGCAGCAGCAGGTGGCAGAGAG
TAGTCCTTCTGCTTAGATGAGTCTCTTCATGCGAGCAAACGATGCTCTCA
ACGTCAACCCGATTGCCGGCGTTGATGAAGCCCTATCTGTGCATGGATCC
GACTGGCTTTGGGCTATCACAGCCATCTATATTGTATCATTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005216 | ion channel activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006811 | ion transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001425 |
| DBxref | PFAM:PF01036 |
| Product | Bacteriorhodopsin-like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3478018..3478921 - |
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