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CAN33_27255-T1, CAN33_27255-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27255-T1
Unique NameCAN33_27255-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3536853..3538501+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27255-T1 ID=CAN33_27255-T1|Name=CAN33_27255-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1649bp|location=Sequence derived from alignment at NKJJ01000002.1:3536853..3538501+ (Aspergillus niger FDAARGOS_311)
ATGTTTCGAAAATCCGCTTCCTTCCTGGGCCAACGGCTCATGGCCGTTTG
TCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAGAAT
GGAAGACGCGATCCATCTACCAGACGATGACGGATCGTTTTGCCCTCACT
AATGGTTCGACCACCGCACCATGCAATACTACGGTAGCCAACTACTGTGG
CGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCATGG
GGTTCGATGCCATCATGATCTCTCCCGTAATTAAAAACATTGCGGGGCGA
TCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATACGA
GATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCGAGG
AGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAATAAT
ATGGCTTACATGACGGACGGCGAGGATCCTGCGACAACCATTGACTACAA
TGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGCCTTA
TTACGAACTGGAACAACTATACGGACGCGCAGTGGTGTCAGACTGGTGAC
AATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCAGGA
CATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCGACG
GGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCTACA
TATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTCGAA
CGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTCCCA
ACTACCCCTCTATTACTCCATGATCACAGCCTTCCTCAACGGCGAGCCTG
CGACTTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCGGATACG
TTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGGCCTA
CATGAATGACGACATTATGCTAGCTAAAACGGCACTGACCTTCATGATGC
TCTACGACGGTATCCCCTTGGTCTACCAGGGTCTGGAGCAGGCCATTGCC
TATTCCAACCGAGCGGCCTTGTGGTTGACGGATTTCGACACCAATGCGAC
GCTATATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCCATTA
ACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCAAGGA
GGTAGCGAGTTGGCTTTCTGGAAGGGCAAAAATGGACGCCAAGTCATCAT
GGTCTTATCTACGGCGGGGTCTGGTGGTTCGGCTTATACTCTGACACTAC
CTGTGAGCTATGGGGCAAGCGAGGTGGTCACGGAAGTGCTGAACTGCGTC
AACTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATAAGGG
CGAGCCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGGCTGT
GTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGCTGCT
GTGGGCTCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTGCTTT
TTCTTTGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATATAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3536853..3538501+

>CAN33_27255-T1 ID=CAN33_27255-T1|Name=CAN33_27255-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3222bp|location=Sequence derived from alignment at NKJJ01000002.1:3536853..3538501+ (Aspergillus niger FDAARGOS_311)
ATGTTTCGAAAATCCGCTTCCTTCCTGGGCCAACGGCTCATGGCCGTTTG
TCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAGAAT
GGAAGACGCGATCCATCTACCAGACGATGACGGATCGTTTTGCCCTCACT
AATGGTTCGACCACCGCACCATGCAATACTACGGTAGCCAACTACTGTGG
CGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCATGG
GGTTCGATGCCATCATGATCTCTCCCGTAATTAAAAACATTGCGGGGCGA
TCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATACGA
GATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCGAGG
AGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAATAAT
ATGGCTTACATGACGGACGGCGAGGATCCTGCGACAACCATTGACTACAA
TGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGCCTTA
TTACGAACTGGAACAACTATACGGACGCGCAGTGGTGTCAGACTGGTGAC
AATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCAGGA
CATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCGACG
GGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCTACA
TATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTCGAA
CGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAACCTTCCTCA
ACGGCGAGCCTGCGACTTTGCTCGAGGAAATCGCGACGATCAATGATCTT
TGCCCGGATACGTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGA
CCGATGGGCCTACATGAATGACGACATTATGCTAGCTAAAACGGCACTGA
CCTTCATGATGCTCTACGACGGTATCCCCTTGGTCTACCAGGGTCTGGAG
CAGGCCATTGCCTATTCCAACCGAGCGGCCTTGTGGTTGACGGATTTCGA
CACCAATGCGACGCTATATAAACACATCAAGAAACTCAATGCCATCCGCA
AACATGCCATTAACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCC
ATCTATCAAGGAGGTAGCGAGTTGGCTTTCTGGAAGGGCAAAAATGGACG
CCAAGTCATCATGGTCTTATCTACGGCGGGGTCTGGTGGTTCGGCTTATA
CTCTGACACTACCTGTGAGCTATGGGGCAAGCGAGGTGGTCACGGAAGTG
CTGAACTGCGTCAACTATACGGTCAACACTTACAGTCAATTGGTCGTGGA
CATGGATAAGGGCGAGCCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGG
GGAGCGGGCTGTGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTG
AGACTTGCTGCTGTGGGCTCTTCGTCGTCTGCTGGTAGCCACTCTGTCAT
ACCGTCTGCTTTTTCTTTGCTTTTCATGGCGATAGTTGCATTTTTGGCAT
TCCGGATATAAATGTTTCGAAAATCCGCTTCCTTCCTGGGCCAACGGCTC
ATGGCCGTTTGTCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAG
CACAGAAGAATGGAAGACGCGATCCATCTACCAGACGATGACGGATCGTT
TTGCCCTCACTAATGGTTCGACCACCGCACCATGCAATACTACGGTAGCC
AACTACTGTGGCGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACAT
CCAAGGCATGGGGTTCGATGCCATCATGATCTCTCCCGTAATTAAAAACA
TTGCGGGGCGATCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTG
GATCTATACGAGATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAA
GCTGAGCGAGGAGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCG
TCATCAATAATATGGCTTACATGACGGACGGCGAGGATCCTGCGACAACC
ATTGACTACAATGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCC
CTACTGCCTTATTACGAACTGGAACAACTATACGGACGCGCAGTGGTGTC
AGACTGGTGACAATTATACTGCACTCCCAGATCTGTACACAGAACACACC
GCGGTGCAGGACATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTA
CTCCGTCGACGGGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCT
TTCTGCCTACATATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTC
ATGGATTCGAACGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCC
AACCTTCCTCAACGGCGAGCCTGCGACTTTGCTCGAGGAAATCGCGACGA
TCAATGATCTTTGCCCGGATACGTTCGCAATGGTCAACTTCATCGAAGAT
CAAGACGTTGACCGATGGGCCTACATGAATGACGACATTATGCTAGCTAA
AACGGCACTGACCTTCATGATGCTCTACGACGGTATCCCCTTGGTCTACC
AGGGTCTGGAGCAGGCCATTGCCTATTCCAACCGAGCGGCCTTGTGGTTG
ACGGATTTCGACACCAATGCGACGCTATATAAACACATCAAGAAACTCAA
TGCCATCCGCAAACATGCCATTAACCTTGATTCCAGCTACATCAGTTCGA
AAACATATCCCATCTATCAAGGAGGTAGCGAGTTGGCTTTCTGGAAGGGC
AAAAATGGACGCCAAGTCATCATGGTCTTATCTACGGCGGGGTCTGGTGG
TTCGGCTTATACTCTGACACTACCTGTGAGCTATGGGGCAAGCGAGGTGG
TCACGGAAGTGCTGAACTGCGTCAACTATACGGTCAACACTTACAGTCAA
TTGGTCGTGGACATGGATAAGGGCGAGCCTCGGGTCTTCTTTCCCGCTTC
GATGATGCCGGGGAGCGGGCTGTGTGGCTACAATACTTCTAATGTGACGT
ATTCTGAGCTGAGACTTGCTGCTGTGGGCTCTTCGTCGTCTGCTGGTAGC
CACTCTGTCATACCGTCTGCTTTTTCTTTGCTTTTCATGGCGATAGTTGC
ATTTTTGGCATTCCGGATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0004556alpha-amylase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27255CAN33_27255Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27255-T1.exon1CAN33_27255-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_27255-T1.exon2CAN33_27255-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27255-T1.cdsCAN33_27255-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27255-T1CAN33_27255-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-28)
NoteCAZy:GH13_27
NoteCAZy:GH13_15
NoteCAZy:GH13_7
NoteCAZy:GH13_20
NoteCAZy:GH13_36
NoteCAZy:GH13_19
NoteCAZy:GH13_2
NoteCAZy:GH13
NoteCAZy:GH13_1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR013777
DBxrefInterPro:IPR015340
DBxrefInterPro:IPR006047
DBxrefPFAM:PF09260
DBxrefPFAM:PF00128
ProductAlpha amylase catalytic domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3536853..3538501 +
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