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CAN33_27285-T1, CAN33_27285-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27285-T1
Unique NameCAN33_27285-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3545774..3546761-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27285-T1 ID=CAN33_27285-T1|Name=CAN33_27285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=988bp|location=Sequence derived from alignment at NKJJ01000002.1:3545774..3546761- (Aspergillus niger FDAARGOS_311)
ATGGCTTCCAAGACTTTCATCGTCACCGGTGCCTCGAGAGGTACGAAAAT
CAACACAATCTAACGCTCATGTCAGCGTCTATATAGGCAATCGTCGACGC
TAAATATCCTATCCACGGTACAGGTATCGGTCTCGCAACGGCTAAGTTCC
TCCTCTCGGCGCCTCAATCCCACAATGTGGTTGTGATGGCCCGTAGCGCG
GAGCCCCTCCAGAAGCTGAAAGACCAGTACCCCACCCAAGTCGAGGTCCT
GACCGGCGATCTGGCGGACTTCTCGCTCGGCCAGAAGGCCGTTGACCTGG
CCTTGAAGGCGTTCGGCCGCCTTGATGGCTTGGTTCTCAACCACGGCATG
CTGGGTCAGGTTGCCAACGTTGCAGAGGCGGATCCGCAACAATGGCAGCA
TGGATTTGATGTCAATTTCATCAGCTTGGTGGCGTTTGTAAGTTACTCTC
ATGGTCTTCCTTGAGGCGGTGGTACAGAGGAGCGGGATATCGCTGCTGGT
TACTGACACGCTGGAACAGATCAAAGCAGGACTCCCTGCCCTTCGCGAAT
CCAAGGGTAAGATCGTCTTCACGTCTTCCGGCGCATCCGTCTCGGGATTC
AAGGGATGGGGTCTGTATGGCGCGACCAAGGCAGCCATGAACCACCTGGC
TTTGAGCCTTGGGGAAGAAGAGCCCGAGGTGACCTCTGTGTCTATTGACC
CGGGCTTGGTTGATACCGAAATCCAGAGACAGATTCGTGAAGATTTGGCT
ACTACTATGGACCGTCAATTCCACTCTGTGTTTACTACAGCCCACCAGGC
TGGAAACCTCCTGAAGCCCGAACAGCCTGGTCATGTAATGGCTAAATTGG
TGATTGACGCGCCGAAGTCGCTGACTGGCAAGTACTTAACGTAAGTTTTA
CTCTTGTTCTCCTATGGCTCCATGGCTATGCAGCAAAACTGACAAGAAAA
ATAGATGGAACGACGAATCTCTGGAAGCTTTCCAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3545774..3546761-

>CAN33_27285-T1 ID=CAN33_27285-T1|Name=CAN33_27285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3036bp|location=Sequence derived from alignment at NKJJ01000002.1:3545774..3546761- (Aspergillus niger FDAARGOS_311)
ATGGAACGACGAATCTCTGGAAGCTTTCCAGTAGATCAAAGCAGGACTCC
CTGCCCTTCGCGAATCCAAGGGTAAGATCGTCTTCACGTCTTCCGGCGCA
TCCGTCTCGGGATTCAAGGGATGGGGTCTGTATGGCGCGACCAAGGCAGC
CATGAACCACCTGGCTTTGAGCCTTGGGGAAGAAGAGCCCGAGGTGACCT
CTGTGTCTATTGACCCGGGCTTGGTTGATACCGAAATCCAGAGACAGATT
CGTGAAGATTTGGCTACTACTATGGACCGTCAATTCCACTCTGTGTTTAC
TACAGCCCACCAGGCTGGAAACCTCCTGAAGCCCGAACAGCCTGGTCATG
TAATGGCTAAATTGGTGATTGACGCGCCGAAGTCGCTGACTGGCAAGTAC
TTAACGTATCGGTCTCGCAACGGCTAAGTTCCTCCTCTCGGCGCCTCAAT
CCCACAATGTGGTTGTGATGGCCCGTAGCGCGGAGCCCCTCCAGAAGCTG
AAAGACCAGTACCCCACCCAAGTCGAGGTCCTGACCGGCGATCTGGCGGA
CTTCTCGCTCGGCCAGAAGGCCGTTGACCTGGCCTTGAAGGCGTTCGGCC
GCCTTGATGGCTTGGTTCTCAACCACGGCATGCTGGGTCAGGTTGCCAAC
GTTGCAGAGGCGGATCCGCAACAATGGCAGCATGGATTTGATGTCAATTT
CATCAGCTTGGTGGCGTTTATGGCTTCCAAGACTTTCATCGTCACCGGTG
CCTCGAGAGATGGAACGACGAATCTCTGGAAGCTTTCCAGTAGATCAAAG
CAGGACTCCCTGCCCTTCGCGAATCCAAGGGTAAGATCGTCTTCACGTCT
TCCGGCGCATCCGTCTCGGGATTCAAGGGATGGGGTCTGTATGGCGCGAC
CAAGGCAGCCATGAACCACCTGGCTTTGAGCCTTGGGGAAGAAGAGCCCG
AGGTGACCTCTGTGTCTATTGACCCGGGCTTGGTTGATACCGAAATCCAG
AGACAGATTCGTGAAGATTTGGCTACTACTATGGACCGTCAATTCCACTC
TGTGTTTACTACAGCCCACCAGGCTGGAAACCTCCTGAAGCCCGAACAGC
CTGGTCATGTAATGGCTAAATTGGTGATTGACGCGCCGAAGTCGCTGACT
GGCAAGTACTTAACGTATCGGTCTCGCAACGGCTAAGTTCCTCCTCTCGG
CGCCTCAATCCCACAATGTGGTTGTGATGGCCCGTAGCGCGGAGCCCCTC
CAGAAGCTGAAAGACCAGTACCCCACCCAAGTCGAGGTCCTGACCGGCGA
TCTGGCGGACTTCTCGCTCGGCCAGAAGGCCGTTGACCTGGCCTTGAAGG
CGTTCGGCCGCCTTGATGGCTTGGTTCTCAACCACGGCATGCTGGGTCAG
GTTGCCAACGTTGCAGAGGCGGATCCGCAACAATGGCAGCATGGATTTGA
TGTCAATTTCATCAGCTTGGTGGCGTTTATGGCTTCCAAGACTTTCATCG
TCACCGGTGCCTCGAGAGATGGAACGACGAATCTCTGGAAGCTTTCCAGT
AGATCAAAGCAGGACTCCCTGCCCTTCGCGAATCCAAGGGTAAGATCGTC
TTCACGTCTTCCGGCGCATCCGTCTCGGGATTCAAGGGATGGGGTCTGTA
TGGCGCGACCAAGGCAGCCATGAACCACCTGGCTTTGAGCCTTGGGGAAG
AAGAGCCCGAGGTGACCTCTGTGTCTATTGACCCGGGCTTGGTTGATACC
GAAATCCAGAGACAGATTCGTGAAGATTTGGCTACTACTATGGACCGTCA
ATTCCACTCTGTGTTTACTACAGCCCACCAGGCTGGAAACCTCCTGAAGC
CCGAACAGCCTGGTCATGTAATGGCTAAATTGGTGATTGACGCGCCGAAG
TCGCTGACTGGCAAGTACTTAACGTATCGGTCTCGCAACGGCTAAGTTCC
TCCTCTCGGCGCCTCAATCCCACAATGTGGTTGTGATGGCCCGTAGCGCG
GAGCCCCTCCAGAAGCTGAAAGACCAGTACCCCACCCAAGTCGAGGTCCT
GACCGGCGATCTGGCGGACTTCTCGCTCGGCCAGAAGGCCGTTGACCTGG
CCTTGAAGGCGTTCGGCCGCCTTGATGGCTTGGTTCTCAACCACGGCATG
CTGGGTCAGGTTGCCAACGTTGCAGAGGCGGATCCGCAACAATGGCAGCA
TGGATTTGATGTCAATTTCATCAGCTTGGTGGCGTTTATGGCTTCCAAGA
CTTTCATCGTCACCGGTGCCTCGAGAGATGGAACGACGAATCTCTGGAAG
CTTTCCAGTAGATCAAAGCAGGACTCCCTGCCCTTCGCGAATCCAAGGGT
AAGATCGTCTTCACGTCTTCCGGCGCATCCGTCTCGGGATTCAAGGGATG
GGGTCTGTATGGCGCGACCAAGGCAGCCATGAACCACCTGGCTTTGAGCC
TTGGGGAAGAAGAGCCCGAGGTGACCTCTGTGTCTATTGACCCGGGCTTG
GTTGATACCGAAATCCAGAGACAGATTCGTGAAGATTTGGCTACTACTAT
GGACCGTCAATTCCACTCTGTGTTTACTACAGCCCACCAGGCTGGAAACC
TCCTGAAGCCCGAACAGCCTGGTCATGTAATGGCTAAATTGGTGATTGAC
GCGCCGAAGTCGCTGACTGGCAAGTACTTAACGTATCGGTCTCGCAACGG
CTAAGTTCCTCCTCTCGGCGCCTCAATCCCACAATGTGGTTGTGATGGCC
CGTAGCGCGGAGCCCCTCCAGAAGCTGAAAGACCAGTACCCCACCCAAGT
CGAGGTCCTGACCGGCGATCTGGCGGACTTCTCGCTCGGCCAGAAGGCCG
TTGACCTGGCCTTGAAGGCGTTCGGCCGCCTTGATGGCTTGGTTCTCAAC
CACGGCATGCTGGGTCAGGTTGCCAACGTTGCAGAGGCGGATCCGCAACA
ATGGCAGCATGGATTTGATGTCAATTTCATCAGCTTGGTGGCGTTTATGG
CTTCCAAGACTTTCATCGTCACCGGTGCCTCGAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27285CAN33_27285Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27285-T1CAN33_27285-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27285-T1.cdsCAN33_27285-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27285-T1.exon4CAN33_27285-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_27285-T1.exon3CAN33_27285-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_27285-T1.exon2CAN33_27285-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_27285-T1.exon1CAN33_27285-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3545774..3546761 -
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