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CAN33_27360-T1, CAN33_27360-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27360-T1
Unique NameCAN33_27360-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3592969..3593883+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27360-T1 ID=CAN33_27360-T1|Name=CAN33_27360-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=915bp|location=Sequence derived from alignment at NKJJ01000002.1:3592969..3593883+ (Aspergillus niger FDAARGOS_311)
ATGCGCATTCTCTGTCTACACGGCTATGGTACGAGCGCCGATGCCCTCCA
ATATCAGTTGTCGGGCCTGCTTCATTCAGCAGATCCCAGCTGGGAGTTTC
ATATGCTGTCCGGCGAGATTGAATGCCCGCCCGCACCTGGTTTGCCATTC
CCTTCTACAGGACACTATTGAATGAGGGAGATCTAACCACTATTGTTTGA
CTTGCTCGAAGGCATCGAAACCAACTTCACTCCCCCATATTACTGCTGGT
CACGCACGTTTAGCGCACCATCTATCGAGAATGCTCATTCTCTAATCGCC
GAAGCGATTGAGGATGAGGGCCCCTTTGACGGTATCTTAGGATTCAGTCA
GGGGGCCTCGATCATTGCCTCCTTCCTCCTCGAACAGACCGCCAACCACC
CGGAAAAGCCGCTCCCATTCCGGTTTGCTATCTTCTGCTCGACAACCATT
CCCTGCTCATCGGATCCCAACTACTGCCGCTCTATAACGGGAGGCCTGTC
TCTGCAAGATCAGCAGCGGATCCGTTCTGGGCAGGATGATCAAATTGCAC
AATTGCCCGCATCTATCAAGGCACCATTTGAAGAATTTGCCAAGGTGGTC
AAGGCAGGCCTGTCAATTACTCGTGAACCAGTCAGCTTCTTTCTAGACCG
GTCTATCGAAGAAATCCCCTGTGCCTTGCACCCGGACCATTTTCCGGGCC
GCCTCTCAATCCCTACATTGCACCTGCGGGGCCATAATGACCTCCCTGGA
TTGTCCGATTGTGCCTCGCTAGTGGAGAAGTTCTGCAACCCCAGGTGTCG
TAAGACCATTGTCCATACTGCCGGACATGATATTCCGAGAAGTGGGTCGG
AGTTGAGGCAATTTAGGGCCGGGTTAGATTGGCTAGTTGCCCAGAGCCAG
TTGCCAACACAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3592969..3593883+

>CAN33_27360-T1 ID=CAN33_27360-T1|Name=CAN33_27360-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1686bp|location=Sequence derived from alignment at NKJJ01000002.1:3592969..3593883+ (Aspergillus niger FDAARGOS_311)
ATGCGCATTCTCTGTCTACACGGCTATGGTACGAGCGCCGATGCCCTCCA
ATATCAGTTGTCGGGCCTGCTTCATTCAGCAGATCCCAGCTGGGAGTTTC
ATATGCTGTCCGGCGAGATTGAATGCCCGCCCGCACCTGGCATCGAAACC
AACTTCACTCCCCCATATTACTGCTGGTCACGCACGTTTAGCGCACCATC
TATCGAGAATGCTCATTCTCTAATCGCCGAAGCGATTGAGGATGAGGGCC
CCTTTGACGGTATCTTAGGATTCAGTCAGGGGGCCTCGATCATTGCCTCC
TTCCTCCTCGAACAGACCGCCAACCACCCGGAAAAGCCGCTCCCATTCCG
GTTTGCTATCTTCTGCTCGACAACCATTCCCTGCTCATCGGATCCCAACT
ACTGCCGCTCTATAACGGGAGGCCTGTCTCTGCAAGATCAGCAGCGGATC
CGTTCTGGGCAGGATGATCAAATTGCACAATTGCCCGCATCTATCAAGGC
ACCATTTGAAGAATTTGCCAAGGTGGTCAAGGCAGGCCTGTCAATTACTC
GTGAACCAGTCAGCTTCTTTCTAGACCGGTCTATCGAAGAAATCCCCTGT
GCCTTGCACCCGGACCATTTTCCGGGCCGCCTCTCAATCCCTACATTGCA
CCTGCGGGGCCATAATGACCTCCCTGGATTGTCCGATTGTGCCTCGCTAG
TGGAGAAGTTCTGCAACCCCAGGTGTCGTAAGACCATTGTCCATACTGCC
GGACATGATATTCCGAGAAGTGGGTCGGAGTTGAGGCAATTTAGGGCCGG
GTTAGATTGGCTAGTTGCCCAGAGCCAGTTGCCAACACAGTAAATGCGCA
TTCTCTGTCTACACGGCTATGGTACGAGCGCCGATGCCCTCCAATATCAG
TTGTCGGGCCTGCTTCATTCAGCAGATCCCAGCTGGGAGTTTCATATGCT
GTCCGGCGAGATTGAATGCCCGCCCGCACCTGGCATCGAAACCAACTTCA
CTCCCCCATATTACTGCTGGTCACGCACGTTTAGCGCACCATCTATCGAG
AATGCTCATTCTCTAATCGCCGAAGCGATTGAGGATGAGGGCCCCTTTGA
CGGTATCTTAGGATTCAGTCAGGGGGCCTCGATCATTGCCTCCTTCCTCC
TCGAACAGACCGCCAACCACCCGGAAAAGCCGCTCCCATTCCGGTTTGCT
ATCTTCTGCTCGACAACCATTCCCTGCTCATCGGATCCCAACTACTGCCG
CTCTATAACGGGAGGCCTGTCTCTGCAAGATCAGCAGCGGATCCGTTCTG
GGCAGGATGATCAAATTGCACAATTGCCCGCATCTATCAAGGCACCATTT
GAAGAATTTGCCAAGGTGGTCAAGGCAGGCCTGTCAATTACTCGTGAACC
AGTCAGCTTCTTTCTAGACCGGTCTATCGAAGAAATCCCCTGTGCCTTGC
ACCCGGACCATTTTCCGGGCCGCCTCTCAATCCCTACATTGCACCTGCGG
GGCCATAATGACCTCCCTGGATTGTCCGATTGTGCCTCGCTAGTGGAGAA
GTTCTGCAACCCCAGGTGTCGTAAGACCATTGTCCATACTGCCGGACATG
ATATTCCGAGAAGTGGGTCGGAGTTGAGGCAATTTAGGGCCGGGTTAGAT
TGGCTAGTTGCCCAGAGCCAGTTGCCAACACAGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27360CAN33_27360Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27360-T1.exon1CAN33_27360-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_27360-T1.exon2CAN33_27360-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27360-T1.cdsCAN33_27360-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27360-T1CAN33_27360-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.17
NoteantiSMASH:Cluster_10000021.18
NoteEggNog:ENOG41
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR005645
DBxrefPFAM:PF03959
ProductSerine hydrolase (FSH1) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3592969..3593883 +
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