|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3725673..3726599+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27555-T1 ID=CAN33_27555-T1|Name=CAN33_27555-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=927bp|location=Sequence derived from alignment at NKJJ01000002.1:3725673..3726599+ (Aspergillus niger FDAARGOS_311)
ATGAGCCGTGTCATCCTCGTCACCGGGGCCAATCGAGGTGAGCGGAGACT
CCTCGCAGTATAGTGCATCCCTTGGCTGACTCAACTTACAGGCATCGGAA
GGGGCCTCGTGGCACATTACCTTGGCCAGCCAGACACGACTGTTATTGGT
ACTGCCCGGGACGTCTCCTCCGCGAATGCGAAAGATCTCAATGAGCTGCC
AAAGGGCGAGGGCTCTCGCCTGATCGTCGTGCCGTTAAGCTCCGATAGCC
CACAGGGCGCGATAGAGGCTGTATCGGAGATCCAGACGCAGCACAGTGTT
GGGCATATTGATATTGTCATTGCTAATGCGGGCATTTGCAACCACTACGG
ACCGGTAGTAGAAATGACCGAGTCCGACGTGCTGTCTCACTTTGAAGTAA
ATACACTGGGACCACTTAGACTGTTCAGAGCTGTTGCGCCCCTGCTGCAG
AAAGCCAGTATTCCCAAGTTCGCTTATGTCTCTACGCTCCTGGCCAGCAT
TCATGAAATTGAACAGATCCCTTCGTTGACCGCCGCGTATGGGATGTCGA
AGGTGGCTGGAAACTATCTTATAAAGAAGATCGATGCGGAGAATCAGTAC
TTGATCGCTTTGCCAATTGATCCGGGGTAGGTTTGCTTTTGCACTCCATA
ACTCATGAGTCAAGAAATGCTGATGCTGAAACTCTCGTTTCTGGTGGGTA
GAATGGTACAGACTGACATGGGGAGTCGTGCAGCACAAGCCAATGGGCTA
GAGAAGGCTCCGGTGACTGTCCAGGATACTGTTCTTGGGATCACCAACCA
GGTATGCAGGATGTTGGCTATCGTGACTAGGTGCGGATTACTAACGTCGT
TACAGATTGAGGCAGCGACAAAGTCGACCACATCTGGTCAATTTGTTAAT
TATAACGGGGAGAGGGTGCGTTGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3725673..3726599+ >CAN33_27555-T1 ID=CAN33_27555-T1|Name=CAN33_27555-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2976bp|location=Sequence derived from alignment at NKJJ01000002.1:3725673..3726599+ (Aspergillus niger FDAARGOS_311)
ATGAGCCGTGTCATCCTCGTCACCGGGGCCAATCGAGGCATCGGAAGGGG
CCTCGTGGCACATTACCTTGGCCAGCCAGACACGACTGTTATTGGTACTG
CCCGGGACGTCTCCTCCGCGAATGCGAAAGATCTCAATGAGCTGCCAAAG
GGCGAGGGCTCTCGCCTGATCGTCGTGCCGTTAAGCTCCGATAGCCCACA
GGGCGCGATAGAGGCTGTATCGGAGATCCAGACGCAGCACAGTGTTGGGC
ATATTGATATTGTCATTGCTAATGCGGGCATTTGCAACCACTACGGACCG
GTAGTAGAAATGACCGAGTCCGACGTGCTGTCTCACTTTGAAGTAAATAC
ACTGGGACCACTTAGACTGTTCAGAGCTGTTGCGCCCCTGCTGCAGAAAG
CCAGTATTCCCAAGTTCGCTTATGTCTCTACGCTCCTGGCCAGCATTCAT
GAAATTGAACAGATCCCTTCGTTGACCGCCGCGTATGGGATGTCGAAGGT
GGCTGGAAACTATCTTATAAAGAAGATCGATGCGGAGAATCAGTACTTGA
TCGCTTTGCCAATTGATCCGGGAATGGTACAGACTGACATGGGGAGTCGT
GCAGCACAAGCCAATGGGCTAGAGAAGGCTCCGGTGACTGTCCAGGATAC
TGTTCTTGGGATCACCAACCAGATTGAGGCAGCGACAAAGTCGACCACAT
CTGGTCAATTTGTTAATTATAACGGGGAGAGGGTGCGTTGGTAGATGAGC
CGTGTCATCCTCGTCACCGGGGCCAATCGAGGCATCGGAAGGGGCCTCGT
GGCACATTACCTTGGCCAGCCAGACACGACTGTTATTGGTACTGCCCGGG
ACGTCTCCTCCGCGAATGCGAAAGATCTCAATGAGCTGCCAAAGGGCGAG
GGCTCTCGCCTGATCGTCGTGCCGTTAAGCTCCGATAGCCCACAGGGCGC
GATAGAGGCTGTATCGGAGATCCAGACGCAGCACAGTGTTGGGCATATTG
ATATTGTCATTGCTAATGCGGGCATTTGCAACCACTACGGACCGGTAGTA
GAAATGACCGAGTCCGACGTGCTGTCTCACTTTGAAGTAAATACACTGGG
ACCACTTAGACTGTTCAGAGCTGTTGCGCCCCTGCTGCAGAAAGCCAGTA
TTCCCAAGTTCGCTTATGTCTCTACGCTCCTGGCCAGCATTCATGAAATT
GAACAGATCCCTTCGTTGACCGCCGCGTATGGGATGTCGAAGGTGGCTGG
AAACTATCTTATAAAGAAGATCGATGCGGAGAATCAGTACTTGATCGCTT
TGCCAATTGATCCGGGAATGGTACAGACTGACATGGGGAGTCGTGCAGCA
CAAGCCAATGGGCTAGAGAAGGCTCCGGTGACTGTCCAGGATACTGTTCT
TGGGATCACCAACCAGATTGAGGCAGCGACAAAGTCGACCACATCTGGTC
AATTTGTTAATTATAACGGGGAGAGGGTGCGTTGGTAGATGAGCCGTGTC
ATCCTCGTCACCGGGGCCAATCGAGGCATCGGAAGGGGCCTCGTGGCACA
TTACCTTGGCCAGCCAGACACGACTGTTATTGGTACTGCCCGGGACGTCT
CCTCCGCGAATGCGAAAGATCTCAATGAGCTGCCAAAGGGCGAGGGCTCT
CGCCTGATCGTCGTGCCGTTAAGCTCCGATAGCCCACAGGGCGCGATAGA
GGCTGTATCGGAGATCCAGACGCAGCACAGTGTTGGGCATATTGATATTG
TCATTGCTAATGCGGGCATTTGCAACCACTACGGACCGGTAGTAGAAATG
ACCGAGTCCGACGTGCTGTCTCACTTTGAAGTAAATACACTGGGACCACT
TAGACTGTTCAGAGCTGTTGCGCCCCTGCTGCAGAAAGCCAGTATTCCCA
AGTTCGCTTATGTCTCTACGCTCCTGGCCAGCATTCATGAAATTGAACAG
ATCCCTTCGTTGACCGCCGCGTATGGGATGTCGAAGGTGGCTGGAAACTA
TCTTATAAAGAAGATCGATGCGGAGAATCAGTACTTGATCGCTTTGCCAA
TTGATCCGGGAATGGTACAGACTGACATGGGGAGTCGTGCAGCACAAGCC
AATGGGCTAGAGAAGGCTCCGGTGACTGTCCAGGATACTGTTCTTGGGAT
CACCAACCAGATTGAGGCAGCGACAAAGTCGACCACATCTGGTCAATTTG
TTAATTATAACGGGGAGAGGGTGCGTTGGTAGATGAGCCGTGTCATCCTC
GTCACCGGGGCCAATCGAGGCATCGGAAGGGGCCTCGTGGCACATTACCT
TGGCCAGCCAGACACGACTGTTATTGGTACTGCCCGGGACGTCTCCTCCG
CGAATGCGAAAGATCTCAATGAGCTGCCAAAGGGCGAGGGCTCTCGCCTG
ATCGTCGTGCCGTTAAGCTCCGATAGCCCACAGGGCGCGATAGAGGCTGT
ATCGGAGATCCAGACGCAGCACAGTGTTGGGCATATTGATATTGTCATTG
CTAATGCGGGCATTTGCAACCACTACGGACCGGTAGTAGAAATGACCGAG
TCCGACGTGCTGTCTCACTTTGAAGTAAATACACTGGGACCACTTAGACT
GTTCAGAGCTGTTGCGCCCCTGCTGCAGAAAGCCAGTATTCCCAAGTTCG
CTTATGTCTCTACGCTCCTGGCCAGCATTCATGAAATTGAACAGATCCCT
TCGTTGACCGCCGCGTATGGGATGTCGAAGGTGGCTGGAAACTATCTTAT
AAAGAAGATCGATGCGGAGAATCAGTACTTGATCGCTTTGCCAATTGATC
CGGGAATGGTACAGACTGACATGGGGAGTCGTGCAGCACAAGCCAATGGG
CTAGAGAAGGCTCCGGTGACTGTCCAGGATACTGTTCTTGGGATCACCAA
CCAGATTGAGGCAGCGACAAAGTCGACCACATCTGGTCAATTTGTTAATT
ATAACGGGGAGAGGGTGCGTTGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3725673..3726599 + |
|
