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CAN33_27580-T1, CAN33_27580-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27580-T1
Unique NameCAN33_27580-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3735703..3736717+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27580-T1 ID=CAN33_27580-T1|Name=CAN33_27580-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1015bp|location=Sequence derived from alignment at NKJJ01000002.1:3735703..3736717+ (Aspergillus niger FDAARGOS_311)
ATGAAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCATTGG
TGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTCTTGATTT
ACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCAAGAT
GCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGGCGAA
GAACTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCCGATT
TCATCCAGGAGGTAGCTCCTGCATTCTTAACGTGCTATGCTCGAGACATC
GGCTTTGCTAATGTATTGCTAGAACGGACCCGAGCGCCCCGAGTTGAAGC
AGGCGCTCATGGAAAAACTGGACCAGTATACCAGACCCGGTGTCATAATC
TCCTCTTCATCTTCTGGCCTCCCTGCATCGAGGTTCATTGGAAGATGCCA
GAAAGACCCCAGTCGCATCCTAGTTGGCCATCCATTCAATCCACCACATC
TAGTCCCCCTGGTGGAAGTTGTCCCTCACCCGGGCACCAGCGCTACCACC
ATATCTGCGGCCCAAGCCTTCTACCGGTTTCTCGGGAAGACGCCCATCCT
GCTCCACCACGAAGTCCCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGA
TCAACAGCGAAGCATACAGCCTTATCAGCCGCGGCATTGTCTCCGCCAAG
GATCTCGACACGGCAATGACATCAGGTCCGGGCCTTCGATGGGCGTTGAC
CGGTCCGTTTGTTACAAATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGT
TTGCCCAGCGTGTTGAACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAA
GACATGTTGAAGCATCGGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCT
GAAGAGAGAGGCTCTTCAATGGCTAGAAACAGTGGATTGGGATGGTTTCA
ATAGGAAGAGAGATCAGATGCTGCTGAGATTGCTGGAAGTAACCTCCCAC
ACATCATCGCCCTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3735703..3736717+

>CAN33_27580-T1 ID=CAN33_27580-T1|Name=CAN33_27580-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1908bp|location=Sequence derived from alignment at NKJJ01000002.1:3735703..3736717+ (Aspergillus niger FDAARGOS_311)
ATGAAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCATTGG
TGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTCTTGATTT
ACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCAAGAT
GCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGGCGAA
GAACTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCCGATT
TCATCCAGGAGAACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCTCATG
GAAAAACTGGACCAGTATACCAGACCCGGTGTCATAATCTCCTCTTCATC
TTCTGGCCTCCCTGCATCGAGGTTCATTGGAAGATGCCAGAAAGACCCCA
GTCGCATCCTAGTTGGCCATCCATTCAATCCACCACATCTAGTCCCCCTG
GTGGAAGTTGTCCCTCACCCGGGCACCAGCGCTACCACCATATCTGCGGC
CCAAGCCTTCTACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCACCACG
AAGTCCCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAGCGAA
GCATACAGCCTTATCAGCCGCGGCATTGTCTCCGCCAAGGATCTCGACAC
GGCAATGACATCAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCGTTTG
TTACAAATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCAGCGT
GTTGAACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGTTGAA
GCATCGGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGAGAGG
CTCTTCAATGGCTAGAAACAGTGGATTGGGATGGTTTCAATAGGAAGAGA
GATCAGATGCTGCTGAGATTGCTGGAAGTAACCTCCCACACATCATCGCC
CTAAATGAAAGATCAGATTAGAACCGTTGCCGTCATTGGCTGCGGTGTCA
TTGGTGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTTTGAACGTCTTG
ATTTACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAGAATTACCTGCA
AGATGCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGAAGATGCCTGGG
CGAAGAACTACAAGTTCATTGACAACATGGAATTGAGCTTATCAGAAGCC
GATTTCATCCAGGAGAACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCT
CATGGAAAAACTGGACCAGTATACCAGACCCGGTGTCATAATCTCCTCTT
CATCTTCTGGCCTCCCTGCATCGAGGTTCATTGGAAGATGCCAGAAAGAC
CCCAGTCGCATCCTAGTTGGCCATCCATTCAATCCACCACATCTAGTCCC
CCTGGTGGAAGTTGTCCCTCACCCGGGCACCAGCGCTACCACCATATCTG
CGGCCCAAGCCTTCTACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCAC
CACGAAGTCCCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAG
CGAAGCATACAGCCTTATCAGCCGCGGCATTGTCTCCGCCAAGGATCTCG
ACACGGCAATGACATCAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCG
TTTGTTACAAATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCA
GCGTGTTGAACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGT
TGAAGCATCGGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGA
GAGGCTCTTCAATGGCTAGAAACAGTGGATTGGGATGGTTTCAATAGGAA
GAGAGATCAGATGCTGCTGAGATTGCTGGAAGTAACCTCCCACACATCAT
CGCCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27580CAN33_27580Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27580-T1.exon1CAN33_27580-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_27580-T1.exon2CAN33_27580-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27580-T1.cdsCAN33_27580-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27580-T1CAN33_27580-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR006176
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Product3-hydroxyacyl-CoA dehydrogenase NAD binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3735703..3736717 +
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