|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3737620..3738603+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27585-T1 ID=CAN33_27585-T1|Name=CAN33_27585-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=984bp|location=Sequence derived from alignment at NKJJ01000002.1:3737620..3738603+ (Aspergillus niger FDAARGOS_311)
ATGTCCCGACAGATCAAGAATGTCGTCATCGCGGGGGTAGGTTGGAACTT
CTAATCGTAATGACTTTCAAGACATGCCACTAATCCATAATCTCAGGCCA
CCGGAAACCTTGGATCGTATATCCTTACCGCATTGGTGAACCATGGCAGC
TTTAATATTACCGTCTTGACACGCAAGAATGGTGTCAGTTTCCCGACTGG
CGTCACGGCCAAGGTGGTGGATTTCAGCTCTCCCGCGGAATTAGGGCTCG
CTCTTCAGGGTCAGGATGCCGTGGTCGATGCAATCTTGAGTCCCAACCCT
ACCGTTTCCATTGGCTTGATCGATGCCGCGGTCGCTGCCGGAGTTTATCG
CTACATCGCCCCTGAGTTCACCATCCATCCTAAGTACGACAAGACACGGT
CACTGCCCATCTTCCGGGGCAAGGCGCAGATCTATGATCATCTCCAGAAG
GTCGCCAATGATCAGAAGATCACATGGACTGCCATTTCTAATGGTGCCTT
TCTGGACTGGTGTCTGCGATCGGGCTTTTTGAATATTGACTTGATCAAGA
AAAAGATTCTGCTCATGAACGATGGTACCCGTGTCTTCCCTTTGACCGTT
CTTCCCGCCGTTGGTACGGCCGTTGCCAATGCCCTGGCTCAAGCTGAGAA
AACCAAGAATATGCACTGCTCTATCTACGGTGTTCAGAAGAGTCAAAAAG
AGATTGCCGATCTGGCAAAGGAAGCACTTGGACCCGACGGCTGGGAGGTC
GAAAGCCAGGATATGGAAAAGGCCTTCGAAGAAGCTTTATCTGCCACAGC
TATTGGAAACTACAGCTGGACGGTTGTGGGAGACTTAATCCGGTATTCAC
TCGCAACCCCAGGCTATAATGGTGTGTTTGAGGAGAATCACAATGATCTA
TTAGGCGTTCAACCCATGAGCGGTGAGCAGGTCAAGGCCTTGATTAAGGA
AATCTACGATGAGCTGAAGTGTGCTCCACACTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3737620..3738603+ >CAN33_27585-T1 ID=CAN33_27585-T1|Name=CAN33_27585-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1848bp|location=Sequence derived from alignment at NKJJ01000002.1:3737620..3738603+ (Aspergillus niger FDAARGOS_311)
ATGTCCCGACAGATCAAGAATGTCGTCATCGCGGGGGCCACCGGAAACCT
TGGATCGTATATCCTTACCGCATTGGTGAACCATGGCAGCTTTAATATTA
CCGTCTTGACACGCAAGAATGGTGTCAGTTTCCCGACTGGCGTCACGGCC
AAGGTGGTGGATTTCAGCTCTCCCGCGGAATTAGGGCTCGCTCTTCAGGG
TCAGGATGCCGTGGTCGATGCAATCTTGAGTCCCAACCCTACCGTTTCCA
TTGGCTTGATCGATGCCGCGGTCGCTGCCGGAGTTTATCGCTACATCGCC
CCTGAGTTCACCATCCATCCTAAGTACGACAAGACACGGTCACTGCCCAT
CTTCCGGGGCAAGGCGCAGATCTATGATCATCTCCAGAAGGTCGCCAATG
ATCAGAAGATCACATGGACTGCCATTTCTAATGGTGCCTTTCTGGACTGG
TGTCTGCGATCGGGCTTTTTGAATATTGACTTGATCAAGAAAAAGATTCT
GCTCATGAACGATGGTACCCGTGTCTTCCCTTTGACCGTTCTTCCCGCCG
TTGGTACGGCCGTTGCCAATGCCCTGGCTCAAGCTGAGAAAACCAAGAAT
ATGCACTGCTCTATCTACGGTGTTCAGAAGAGTCAAAAAGAGATTGCCGA
TCTGGCAAAGGAAGCACTTGGACCCGACGGCTGGGAGGTCGAAAGCCAGG
ATATGGAAAAGGCCTTCGAAGAAGCTTTATCTGCCACAGCTATTGGAAAC
TACAGCTGGACGGTTGTGGGAGACTTAATCCGGTATTCACTCGCAACCCC
AGGCTATAATGGTGTGTTTGAGGAGAATCACAATGATCTATTAGGCGTTC
AACCCATGAGCGGTGAGCAGGTCAAGGCCTTGATTAAGGAAATCTACGAT
GAGCTGAAGTGTGCTCCACACTAGATGTCCCGACAGATCAAGAATGTCGT
CATCGCGGGGGCCACCGGAAACCTTGGATCGTATATCCTTACCGCATTGG
TGAACCATGGCAGCTTTAATATTACCGTCTTGACACGCAAGAATGGTGTC
AGTTTCCCGACTGGCGTCACGGCCAAGGTGGTGGATTTCAGCTCTCCCGC
GGAATTAGGGCTCGCTCTTCAGGGTCAGGATGCCGTGGTCGATGCAATCT
TGAGTCCCAACCCTACCGTTTCCATTGGCTTGATCGATGCCGCGGTCGCT
GCCGGAGTTTATCGCTACATCGCCCCTGAGTTCACCATCCATCCTAAGTA
CGACAAGACACGGTCACTGCCCATCTTCCGGGGCAAGGCGCAGATCTATG
ATCATCTCCAGAAGGTCGCCAATGATCAGAAGATCACATGGACTGCCATT
TCTAATGGTGCCTTTCTGGACTGGTGTCTGCGATCGGGCTTTTTGAATAT
TGACTTGATCAAGAAAAAGATTCTGCTCATGAACGATGGTACCCGTGTCT
TCCCTTTGACCGTTCTTCCCGCCGTTGGTACGGCCGTTGCCAATGCCCTG
GCTCAAGCTGAGAAAACCAAGAATATGCACTGCTCTATCTACGGTGTTCA
GAAGAGTCAAAAAGAGATTGCCGATCTGGCAAAGGAAGCACTTGGACCCG
ACGGCTGGGAGGTCGAAAGCCAGGATATGGAAAAGGCCTTCGAAGAAGCT
TTATCTGCCACAGCTATTGGAAACTACAGCTGGACGGTTGTGGGAGACTT
AATCCGGTATTCACTCGCAACCCCAGGCTATAATGGTGTGTTTGAGGAGA
ATCACAATGATCTATTAGGCGTTCAACCCATGAGCGGTGAGCAGGTCAAG
GCCTTGATTAAGGAAATCTACGATGAGCTGAAGTGTGCTCCACACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | NmrA-like family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3737620..3738603 + |
|
