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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:3791457..3793421- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_27645-T1 ID=CAN33_27645-T1|Name=CAN33_27645-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1965bp|location=Sequence derived from alignment at NKJJ01000002.1:3791457..3793421- (Aspergillus niger FDAARGOS_311)
ATGTCCCCAATCCTTGCTTCAGCTCTACTTCTCTCCGGGGTCCTGGCGGA
GCACTTCCAGGTCCCTTTACAACATACCATCTCACCTTGCTCCACCAGTC
CACATACTACCCACAACGACTTTAACCACAACATCAACTCCATCCCCCAC
GGCATCACTGACGACCCTCGCAGTATCGACAACCAGACATTCGACTACAT
AATCGCCGGCGGCGGGCTAACTGGCCTCACCCTCGCCGCCAAACTAGTCG
AGCAGAAGAAATACACCGTCCTAGTGATCGAAAGCGGCTTCTATGCATGG
GAATACGGCCCCAAGATTGACGACCTCAACACCTACGGCCAAGTATTCGG
CAGCAGCGTCGATCATGCCTACGAGACCAGTCCGCAGCTCGTCGGCAACG
ACGGTGAAACTGGACTAGATAAAGACATCAGAATTGTTCGGTCCGGAAAT
GGTCTCGGAGGGTCAACGCTCATCAATGGGGGAACGTGGACGAGGCCTCA
CAAGTCGCAGCTTGATTCGTGGGAAGAGGTCTTTGGGAATACAGGGTGGA
ATTGGGACGCGCTGAAGGGGAAGATGGATGAGATTGAGGTTCCAAGGGAT
CCGACGTCGGATGATATTACGGAGGGGTCGTTCCATAAGTTTGATGCTAA
GTGTCACAATCAACAGCCGGGTAAGGGGAAGGTTAAAGTCGGGGCGAGGG
ATCGGAAGTATGGTTGGTCGCCGTTGATCAAGGCGTTGATGCATACGGTT
AACAGTACGTATGAAGAGGTGGTGAATCAGAAGGATCTGTGTTGTGGGGA
TCCAACTGGGGTGTCGATGTTTTTGAACACGCTTACCAATGAGCAAATCC
GGACGGATGCTGCTAGGTCGTGGTTGAAGCCAATCTTGGATGATGATGAG
TTGAAGCAGTATATTACGGTTTTGACGGGGGAGCTCGTTGGGAAGGTTCA
TCTGGCCGACGCCAACCCTTCGGAGACAGGAACAGAATTCAAAGCGAAAG
GTGTGGAGTTTGGGGTGCACAAGAAACAGGAGTGGAAGTGGGATGCTTGG
GCCAGGAAAGAAGTCCTTCTAGCCGCGGGGTCCACGATCTCTCCCCTCAT
TCTGCAGTGGTCGGGAATCGGTCCGAAAACCTGGCTTGATGCTGCGGGAA
TAGAACATAAGTTGGAGCTCCCTGTGGGATATAACCTCCAGGATCAAACA
ACCACTTCGGTAGTGACGAAGCCGAAACCAGAAGCGAATGGCCAAGGCCA
GGCAGCCTACTTTGCAACCTTTGCAGAGATCTTCGGTAAAGATGCCTCAG
ATATGGAAAAGCTCCTGAAAGACGATACAGAGCTCGACAAATGGGCAGAA
CACACAGTGAACGGCCACGGATTCCCCGACAAGGCCAACCTCCTAAAACA
GTACAAGAACTACCGAGACTGGCTCCTAACCGACAAAGTATCCTATGCCG
AACTATTCCTTGACACCGACAACAGCACCCATTTCGACCTCTGGAATCTG
ATCCCATTCACCCGAGGGTATGTCAAGATCCTAGACAACGACCCCTATCT
GCGAAGCTTCGAATATAACCCGCGATACTTTGAAAATATCCTCGACTTGA
ACGGCCAAGCTGCTGCTACGCGGCTGGCACGACAATTGACCAACACGTAT
GACATGAAACAGTACGTGGACAAAGAGCAGGTCCCGGGGAGGTATGTACC
AGAGAACGCGAGTCTAACTGAATGGGCCGATTATGTGAAGCAAAACTACC
GGGCCAATTATCACGGGGTGGGGACTTGCTCTATGATGAAGAAGGAGCTT
GGTGGTGTTGTCGACCCGGAGGCTAAGGTGTATGGTGTGGAGGGGTTGAG
AGTGGTGGATGGTTCAATCCCGCCTACGCAGGTGTCGTCGCATGTTATGA
CGGTGTTTTATGCGATGGCTGTGAAAATTGCAGAGTCAGTTATTAAGGAT
GCTGGTAATGCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:3791457..3793421- >CAN33_27645-T1 ID=CAN33_27645-T1|Name=CAN33_27645-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1965bp|location=Sequence derived from alignment at NKJJ01000002.1:3791457..3793421- (Aspergillus niger FDAARGOS_311)
ATGTCCCCAATCCTTGCTTCAGCTCTACTTCTCTCCGGGGTCCTGGCGGA
GCACTTCCAGGTCCCTTTACAACATACCATCTCACCTTGCTCCACCAGTC
CACATACTACCCACAACGACTTTAACCACAACATCAACTCCATCCCCCAC
GGCATCACTGACGACCCTCGCAGTATCGACAACCAGACATTCGACTACAT
AATCGCCGGCGGCGGGCTAACTGGCCTCACCCTCGCCGCCAAACTAGTCG
AGCAGAAGAAATACACCGTCCTAGTGATCGAAAGCGGCTTCTATGCATGG
GAATACGGCCCCAAGATTGACGACCTCAACACCTACGGCCAAGTATTCGG
CAGCAGCGTCGATCATGCCTACGAGACCAGTCCGCAGCTCGTCGGCAACG
ACGGTGAAACTGGACTAGATAAAGACATCAGAATTGTTCGGTCCGGAAAT
GGTCTCGGAGGGTCAACGCTCATCAATGGGGGAACGTGGACGAGGCCTCA
CAAGTCGCAGCTTGATTCGTGGGAAGAGGTCTTTGGGAATACAGGGTGGA
ATTGGGACGCGCTGAAGGGGAAGATGGATGAGATTGAGGTTCCAAGGGAT
CCGACGTCGGATGATATTACGGAGGGGTCGTTCCATAAGTTTGATGCTAA
GTGTCACAATCAACAGCCGGGTAAGGGGAAGGTTAAAGTCGGGGCGAGGG
ATCGGAAGTATGGTTGGTCGCCGTTGATCAAGGCGTTGATGCATACGGTT
AACAGTACGTATGAAGAGGTGGTGAATCAGAAGGATCTGTGTTGTGGGGA
TCCAACTGGGGTGTCGATGTTTTTGAACACGCTTACCAATGAGCAAATCC
GGACGGATGCTGCTAGGTCGTGGTTGAAGCCAATCTTGGATGATGATGAG
TTGAAGCAGTATATTACGGTTTTGACGGGGGAGCTCGTTGGGAAGGTTCA
TCTGGCCGACGCCAACCCTTCGGAGACAGGAACAGAATTCAAAGCGAAAG
GTGTGGAGTTTGGGGTGCACAAGAAACAGGAGTGGAAGTGGGATGCTTGG
GCCAGGAAAGAAGTCCTTCTAGCCGCGGGGTCCACGATCTCTCCCCTCAT
TCTGCAGTGGTCGGGAATCGGTCCGAAAACCTGGCTTGATGCTGCGGGAA
TAGAACATAAGTTGGAGCTCCCTGTGGGATATAACCTCCAGGATCAAACA
ACCACTTCGGTAGTGACGAAGCCGAAACCAGAAGCGAATGGCCAAGGCCA
GGCAGCCTACTTTGCAACCTTTGCAGAGATCTTCGGTAAAGATGCCTCAG
ATATGGAAAAGCTCCTGAAAGACGATACAGAGCTCGACAAATGGGCAGAA
CACACAGTGAACGGCCACGGATTCCCCGACAAGGCCAACCTCCTAAAACA
GTACAAGAACTACCGAGACTGGCTCCTAACCGACAAAGTATCCTATGCCG
AACTATTCCTTGACACCGACAACAGCACCCATTTCGACCTCTGGAATCTG
ATCCCATTCACCCGAGGGTATGTCAAGATCCTAGACAACGACCCCTATCT
GCGAAGCTTCGAATATAACCCGCGATACTTTGAAAATATCCTCGACTTGA
ACGGCCAAGCTGCTGCTACGCGGCTGGCACGACAATTGACCAACACGTAT
GACATGAAACAGTACGTGGACAAAGAGCAGGTCCCGGGGAGGTATGTACC
AGAGAACGCGAGTCTAACTGAATGGGCCGATTATGTGAAGCAAAACTACC
GGGCCAATTATCACGGGGTGGGGACTTGCTCTATGATGAAGAAGGAGCTT
GGTGGTGTTGTCGACCCGGAGGCTAAGGTGTATGGTGTGGAGGGGTTGAG
AGTGGTGGATGGTTCAATCCCGCCTACGCAGGTGTCGTCGCATGTTATGA
CGGTGTTTTATGCGATGGCTGTGAAAATTGCAGAGTCAGTTATTAAGGAT
GCTGGTAATGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-16) |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR027424 |
| DBxref | InterPro:IPR012132 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | GMC oxidoreductase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:3791457..3793421 - |
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