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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1713835..1715233- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2765-T1 ID=CAN33_2765-T1|Name=CAN33_2765-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1399bp|location=Sequence derived from alignment at NKJJ01000004.1:1713835..1715233- (Aspergillus niger FDAARGOS_311)
ATGCGGAGACTTGCGGGGGAATCCTCAACCCCGGAATCTCACCCAGCTGA
TAGCCGAATGGCTACACACTATACATACAGACAAAATCTCTATGTTGCCC
AGCAGCAGCAGCAGCAGCCACCAGCACCGATTCCGCCTCAATGGCAAACC
AGTCCTATCCCAGCGCGAGAAACTCATCCAAAAGATCGAAGCCGGAGTCC
AACGAAAGGCTCACTTCAAATCACGAAACGGATGCGCCGCATGCAAGCAG
AAACGAGTGAAATGCGACGAAGTCAAGCCAATATGCGGGAAATGCGCCGC
AAAGGGGACGACAGCAGCCTGTCAGTACAGCAACAATAACAACGACAGTG
AACAATCCCAGCAGACATTACCAATATACCAAATCCAACCCAAATCCTTA
ACCCTAGCTGGCATCAATCAACTCGCCAACACCATTATTCCGGCAGAGCT
CCTCCTCCATCATTTCTATACCCACACCAGCAACCGCTTGATGGGCGGGG
AAAAGCGACAATCCATATACAGATACCATATGCTTCCGCTGTCGATCTCA
CAGCATTCGCTGCTTCATGCTATTCTGGCTGTGTCGGCGAGGGATCTGCT
CTGCCTACATCGCCATCATCAGGACTGCCAGCATGGTTACCAACAAATAA
AAGAGCGACAGAAACTCGTGCTATCATTCTACCACCACTACCACCGCTTC
GCAACCCTCTACAAAGACGACCTCCTCCGCCCACCATCTACCGAAACAGC
TAACTTAGCTCACTCGAACGCATTTCTCATGAACGTCCTAGTCGTCGCAG
ATCCAGCGAGTACCTCCTACTCCTCCTCCACATCAAACTTATGGGTCACA
AGAAAAGCCAAAGACAACATCGACGCCGCATTCTCATGGATCAAAGTCCA
AGCTATCCATCAAACGATTCTAGAGCCCTATTGGAAATTTGTGCCGAGTA
CATTTTGGTATTCTGTGTTCGTGGACGATCATCACCAGCAGAAGGACGAC
CAAGAGCAACAAGAACCCTCCGTAAATACAACTACCGGCATAAGGAAAAT
CATCATCGATCATCTCGCTATTATATGTGCTATTGAACAAACATCTACTA
CGACGCCGGAAAGAAACGTCTATCTCTCCGCGTATAAGAATCTATGCTCT
ATCCTCACTACACCTATCCCTCGTACATCTCGAACACCATCAGCTCAAAT
CTTCGGCTCATACATCAAATTCATGATAGAGTTAAATGCACACTTTGTGA
ATTTACTTCGCTCTAAGGATGAACCTGCGCTGCTAATGTTCAGCATCTGG
TTAAATCGGATGAGAAGGTTAGATCTATGGTGGATGAACGAGAGGGCGGG
GAGTGAATGTGCCGCTATTTGGGAGTTTTGGAGAGCAGGAATAACTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1713835..1715233- >CAN33_2765-T1 ID=CAN33_2765-T1|Name=CAN33_2765-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2658bp|location=Sequence derived from alignment at NKJJ01000004.1:1713835..1715233- (Aspergillus niger FDAARGOS_311)
CGCGAGAAACTCATCCAAAAGATCGAAGCCGGAGTCCAACGAAAGGCTCA
CTTCAAATCACGAAACGGATGCGCCGCATGCAAGCAGAAACGAGTGAAAT
GCGACGAAGTCAAGCCAATATGCGGGAAATGCGCCGCAAAGGGGACGACA
GCAGCCTGTCAGTACAGCAACAATAACAACGACAGTGAACAATCCCAGCA
GACATTACCAATATACCAAATCCAACCCAAATCCTTAACCCTAGCTGGCA
TCAATCAACTCGCCAACACCATTATTCCGGCAGAGCTCCTCCTCCATCAT
TTCTATACCCACACCAGCAACCGCTTGATGGGCGGGGAAAAGCGACAATC
CATATACAGATACCATATGCTTCCGCTGTCGATCTCACAGCATTCGCTGC
TTCATGCTATTCTGGCTGTGTCGGCGAGGGATCTGCTCTGCCTACATCGC
CATCATCAGGACTGCCAGCATGGTTACCAACAAATAAAAGAGCGACAGAA
ACTCGTGCTATCATTCTACCACCACTACCACCGCTTCGCAACCCTCTACA
AAGACGACCTCCTCCGCCCACCATCTACCGAAACAGCTAACTTAGCTCAC
TCGAACGCATTTCTCATGAACGTCCTAGTCGTCGCAGATCCAGCGAGTAC
CTCCTACTCCTCCTCCACATCAAACTTATGGGTCACAAGAAAAGCCAAAG
ACAACATCGACGCCGCATTCTCATGGATCAAAGTCCAAGCTATCCATCAA
ACGATTCTAGAGCCCTATTGGAAATTTGTGCCGAGTACATTTTGGTATTC
TGTGTTCGTGGACGATCATCACCAGCAGAAGGACGACCAAGAGCAACAAG
AACCCTCCGTAAATACAACTACCGGCATAAGGAAAATCATCATCGATCAT
CTCGCTATTATATGTGCTATTGAACAAACATCTACTACGACGCCGGAAAG
AAACGTCTATCTCTCCGCGTATAAGAATCTATGCTCTATCCTCACTACAC
CTATCCCTCGTACATCTCGAACACCATCAGCTCAAATCTTCGGCTCATAC
ATCAAATTCATGATAGAGTTAAATGCACACTTTGTGAATTTACTTCGCTC
TAAGGATGAACCTGCGCTGCTAATGTTCAGCATCTGGTTAAATCGGATGA
GAAGGTTAGATCTATGGTGGATGAACGAGAGGGCGGGGAGTGAATGTGCC
GCTATTTGGGAGTTTTGGAGAGCAGGAATAACTTGAATGCGGAGACTTGC
GGGGGAATCCTCAACCCCGGAATCTCACCCAGCTGATAGCCGAATGGCTA
CACACTATACATACAGACAAAATCTCTATCGCGAGAAACTCATCCAAAAG
ATCGAAGCCGGAGTCCAACGAAAGGCTCACTTCAAATCACGAAACGGATG
CGCCGCATGCAAGCAGAAACGAGTGAAATGCGACGAAGTCAAGCCAATAT
GCGGGAAATGCGCCGCAAAGGGGACGACAGCAGCCTGTCAGTACAGCAAC
AATAACAACGACAGTGAACAATCCCAGCAGACATTACCAATATACCAAAT
CCAACCCAAATCCTTAACCCTAGCTGGCATCAATCAACTCGCCAACACCA
TTATTCCGGCAGAGCTCCTCCTCCATCATTTCTATACCCACACCAGCAAC
CGCTTGATGGGCGGGGAAAAGCGACAATCCATATACAGATACCATATGCT
TCCGCTGTCGATCTCACAGCATTCGCTGCTTCATGCTATTCTGGCTGTGT
CGGCGAGGGATCTGCTCTGCCTACATCGCCATCATCAGGACTGCCAGCAT
GGTTACCAACAAATAAAAGAGCGACAGAAACTCGTGCTATCATTCTACCA
CCACTACCACCGCTTCGCAACCCTCTACAAAGACGACCTCCTCCGCCCAC
CATCTACCGAAACAGCTAACTTAGCTCACTCGAACGCATTTCTCATGAAC
GTCCTAGTCGTCGCAGATCCAGCGAGTACCTCCTACTCCTCCTCCACATC
AAACTTATGGGTCACAAGAAAAGCCAAAGACAACATCGACGCCGCATTCT
CATGGATCAAAGTCCAAGCTATCCATCAAACGATTCTAGAGCCCTATTGG
AAATTTGTGCCGAGTACATTTTGGTATTCTGTGTTCGTGGACGATCATCA
CCAGCAGAAGGACGACCAAGAGCAACAAGAACCCTCCGTAAATACAACTA
CCGGCATAAGGAAAATCATCATCGATCATCTCGCTATTATATGTGCTATT
GAACAAACATCTACTACGACGCCGGAAAGAAACGTCTATCTCTCCGCGTA
TAAGAATCTATGCTCTATCCTCACTACACCTATCCCTCGTACATCTCGAA
CACCATCAGCTCAAATCTTCGGCTCATACATCAAATTCATGATAGAGTTA
AATGCACACTTTGTGAATTTACTTCGCTCTAAGGATGAACCTGCGCTGCT
AATGTTCAGCATCTGGTTAAATCGGATGAGAAGGTTAGATCTATGGTGGA
TGAACGAGAGGGCGGGGAGTGAATGTGCCGCTATTTGGGAGTTTTGGAGA
GCAGGAATAACTTGAATGCGGAGACTTGCGGGGGAATCCTCAACCCCGGA
ATCTCACCCAGCTGATAGCCGAATGGCTACACACTATACATACAGACAAA
ATCTCTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | Fungal Zn(2)-Cys(6) binuclear cluster domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1713835..1715233 - |
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