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CAN33_27670-T1, CAN33_27670-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_27670-T1
Unique NameCAN33_27670-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000002.1:3809194..3810734+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_27670-T1 ID=CAN33_27670-T1|Name=CAN33_27670-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1541bp|location=Sequence derived from alignment at NKJJ01000002.1:3809194..3810734+ (Aspergillus niger FDAARGOS_311)
ATGGCCGTCTTCGTCTCCATGGGTGGTCTCCTTTTTGGTTATGACACTGG
TCAGATCTCCGGTTTTGAGCAGGAATCCGACTATCTTCGCCGCTATGGTA
TGCAGAATGCCAAGGGCGAATGGTACCTGAGTGACGTCCGCTCCGGTCTG
TTGACCAGTCTTCTGTCCATTGGTACCTTGGTTGGTGCTCTCGTCGCTGC
CCCCATCGCCAACAAGGTGGGCCGTAAGTGGTCCATCACCATCTGGTGTG
TCATCCTCATGGTCGGCTTGATTGTCCAGATCTCCGCCCCCTCGGGCAAC
TGGGTCCAGATGGTCATGGGTCGTTGGACCACTGGTCTGGGTGTTGGTGC
TTGCTCCCTGCTGGTCCCCATGTACCAGGGTGAGAGTGCCCCCCGTCACG
TGCGTGGTGCGATGGTCAGTTGCTACCAGCTGTTCGTCACCTTCGGTATC
TTCCTGGCCTACCTGATCAACCTGGGTACCAACACCCTGGAGGGCACTGC
CCAATGGCGGATCACCCTCGGTCTAACCTTCCTGTTCGCCATTGTCCTCG
GTGGTGGTATGGCTTTCTTCCCCGAGTCGCCTCGTTTCGACTTCCGCCAC
GGCCGCGTCGACCGGGCTCGCGCTACCATGGCCAAGCTGTACGGTGTGCC
TGAGAACCACCAAGTCATCCTTCAGGAGCTCGACGAGATCCAGAACCAGC
TCGAGGCCGAAACCGGCAGCGAGAAGTGGTACGAGTTTCTCACTGCGCCT
CGCATGTTCTACCGTATCTGCCTGGGTATGGGCCTGCAGACCCTCCAGCA
GCTGACTGGTTCCAACTACTTCTTCTACTATGTATGTATCCCCTGCAGAT
ATCTCTTCAAATAGTTCATAATACTAACCTGTCATAGGGTACCACCATCT
TCAAGGGTGCCGGTCTGTCCAACAGCTTCGTTACCCAGTGCATTCTGGGT
GCCGTCAACTTCGCTTGCACCTTCGGTGGTCTGTACACCGTTGAGAACTT
CGGTCGTCGCAAGTCTCTGATCTTCGGAGCCCTGTGGATGTTCGTCTGCT
TCATGATCTTCGCTTCGATCGGTCACTTCATGCTCGACGTCGCTGAGCCC
GAGAACACCCCTGGCGTCGGTAAGGGTATGATTGTGCTCGCTTGCTTCTT
CATTGCCGGATACGCCATGACCTGGGCTCCCATGGTCTGGACCATCACTG
CCGAGCTGTACCCCTCCAAGTACCGTGCCCAGGGTATGGCTCTGGCCGTT
GCTGCCAACTGGGCCTGGAACTTCCTGATCGGTTTCTTCACTCCCTTCAT
CACCAGCGCCATCGACTTCGCCTACGGATACGTCTTCGCTGGCTGCATGT
TCGTCGGTGCCTTTGTCGTCTACTTCTTCGTCATGGAGGGTAAGGGCCGT
ACTCTCGAGGAGCTTGACTGGCTGTACGTCAACAAGATCAAGCCCTGGAA
GAGCAGCAATTTCGAGATCCCTGCCCTGCACTCCTTCCAGTACGAGGAGG
AGCGCAAGCAGTCTCGTTCTTACCACGCTGAGAATGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000002.1:3809194..3810734+

>CAN33_27670-T1 ID=CAN33_27670-T1|Name=CAN33_27670-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2970bp|location=Sequence derived from alignment at NKJJ01000002.1:3809194..3810734+ (Aspergillus niger FDAARGOS_311)
ATGGCCGTCTTCGTCTCCATGGGTGGTCTCCTTTTTGGTTATGACACTGG
TCAGATCTCCGGTTTTGAGCAGGAATCCGACTATCTTCGCCGCTATGGTA
TGCAGAATGCCAAGGGCGAATGGTACCTGAGTGACGTCCGCTCCGGTCTG
TTGACCAGTCTTCTGTCCATTGGTACCTTGGTTGGTGCTCTCGTCGCTGC
CCCCATCGCCAACAAGGTGGGCCGTAAGTGGTCCATCACCATCTGGTGTG
TCATCCTCATGGTCGGCTTGATTGTCCAGATCTCCGCCCCCTCGGGCAAC
TGGGTCCAGATGGTCATGGGTCGTTGGACCACTGGTCTGGGTGTTGGTGC
TTGCTCCCTGCTGGTCCCCATGTACCAGGGTGAGAGTGCCCCCCGTCACG
TGCGTGGTGCGATGGTCAGTTGCTACCAGCTGTTCGTCACCTTCGGTATC
TTCCTGGCCTACCTGATCAACCTGGGTACCAACACCCTGGAGGGCACTGC
CCAATGGCGGATCACCCTCGGTCTAACCTTCCTGTTCGCCATTGTCCTCG
GTGGTGGTATGGCTTTCTTCCCCGAGTCGCCTCGTTTCGACTTCCGCCAC
GGCCGCGTCGACCGGGCTCGCGCTACCATGGCCAAGCTGTACGGTGTGCC
TGAGAACCACCAAGTCATCCTTCAGGAGCTCGACGAGATCCAGAACCAGC
TCGAGGCCGAAACCGGCAGCGAGAAGTGGTACGAGTTTCTCACTGCGCCT
CGCATGTTCTACCGTATCTGCCTGGGTATGGGCCTGCAGACCCTCCAGCA
GCTGACTGGTTCCAACTACTTCTTCTACTATGGTACCACCATCTTCAAGG
GTGCCGGTCTGTCCAACAGCTTCGTTACCCAGTGCATTCTGGGTGCCGTC
AACTTCGCTTGCACCTTCGGTGGTCTGTACACCGTTGAGAACTTCGGTCG
TCGCAAGTCTCTGATCTTCGGAGCCCTGTGGATGTTCGTCTGCTTCATGA
TCTTCGCTTCGATCGGTCACTTCATGCTCGACGTCGCTGAGCCCGAGAAC
ACCCCTGGCGTCGGTAAGGGTATGATTGTGCTCGCTTGCTTCTTCATTGC
CGGATACGCCATGACCTGGGCTCCCATGGTCTGGACCATCACTGCCGAGC
TGTACCCCTCCAAGTACCGTGCCCAGGGTATGGCTCTGGCCGTTGCTGCC
AACTGGGCCTGGAACTTCCTGATCGGTTTCTTCACTCCCTTCATCACCAG
CGCCATCGACTTCGCCTACGGATACGTCTTCGCTGGCTGCATGTTCGTCG
GTGCCTTTGTCGTCTACTTCTTCGTCATGGAGGGTAAGGGCCGTACTCTC
GAGGAGCTTGACTGGCTGTACGTCAACAAGATCAAGCCCTGGAAGAGCAG
CAATTTCGAGATCCCTGCCCTGCACTCCTTCCAGTACGAGGAGGAGCGCA
AGCAGTCTCGTTCTTACCACGCTGAGAATGCGTAAATGGCCGTCTTCGTC
TCCATGGGTGGTCTCCTTTTTGGTTATGACACTGGTCAGATCTCCGGTTT
TGAGCAGGAATCCGACTATCTTCGCCGCTATGGTATGCAGAATGCCAAGG
GCGAATGGTACCTGAGTGACGTCCGCTCCGGTCTGTTGACCAGTCTTCTG
TCCATTGGTACCTTGGTTGGTGCTCTCGTCGCTGCCCCCATCGCCAACAA
GGTGGGCCGTAAGTGGTCCATCACCATCTGGTGTGTCATCCTCATGGTCG
GCTTGATTGTCCAGATCTCCGCCCCCTCGGGCAACTGGGTCCAGATGGTC
ATGGGTCGTTGGACCACTGGTCTGGGTGTTGGTGCTTGCTCCCTGCTGGT
CCCCATGTACCAGGGTGAGAGTGCCCCCCGTCACGTGCGTGGTGCGATGG
TCAGTTGCTACCAGCTGTTCGTCACCTTCGGTATCTTCCTGGCCTACCTG
ATCAACCTGGGTACCAACACCCTGGAGGGCACTGCCCAATGGCGGATCAC
CCTCGGTCTAACCTTCCTGTTCGCCATTGTCCTCGGTGGTGGTATGGCTT
TCTTCCCCGAGTCGCCTCGTTTCGACTTCCGCCACGGCCGCGTCGACCGG
GCTCGCGCTACCATGGCCAAGCTGTACGGTGTGCCTGAGAACCACCAAGT
CATCCTTCAGGAGCTCGACGAGATCCAGAACCAGCTCGAGGCCGAAACCG
GCAGCGAGAAGTGGTACGAGTTTCTCACTGCGCCTCGCATGTTCTACCGT
ATCTGCCTGGGTATGGGCCTGCAGACCCTCCAGCAGCTGACTGGTTCCAA
CTACTTCTTCTACTATGGTACCACCATCTTCAAGGGTGCCGGTCTGTCCA
ACAGCTTCGTTACCCAGTGCATTCTGGGTGCCGTCAACTTCGCTTGCACC
TTCGGTGGTCTGTACACCGTTGAGAACTTCGGTCGTCGCAAGTCTCTGAT
CTTCGGAGCCCTGTGGATGTTCGTCTGCTTCATGATCTTCGCTTCGATCG
GTCACTTCATGCTCGACGTCGCTGAGCCCGAGAACACCCCTGGCGTCGGT
AAGGGTATGATTGTGCTCGCTTGCTTCTTCATTGCCGGATACGCCATGAC
CTGGGCTCCCATGGTCTGGACCATCACTGCCGAGCTGTACCCCTCCAAGT
ACCGTGCCCAGGGTATGGCTCTGGCCGTTGCTGCCAACTGGGCCTGGAAC
TTCCTGATCGGTTTCTTCACTCCCTTCATCACCAGCGCCATCGACTTCGC
CTACGGATACGTCTTCGCTGGCTGCATGTTCGTCGGTGCCTTTGTCGTCT
ACTTCTTCGTCATGGAGGGTAAGGGCCGTACTCTCGAGGAGCTTGACTGG
CTGTACGTCAACAAGATCAAGCCCTGGAAGAGCAGCAATTTCGAGATCCC
TGCCCTGCACTCCTTCCAGTACGAGGAGGAGCGCAAGCAGTCTCGTTCTT
ACCACGCTGAGAATGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_27670CAN33_27670Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27670-T1.exon1CAN33_27670-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_27670-T1.exon2CAN33_27670-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27670-T1.cdsCAN33_27670-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_27670-T1CAN33_27670-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
ProductSugar (and other) transporter family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000002.1supercontigNKJJ01000002.1:3809194..3810734 +
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